RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 PLCH2O75038 1416 aa16.53■□□□□ 0.24
NCAPD3-212ENST00000534290 SCAPERQ9BY12 1400 aa16.53■□□□□ 0.24
NCAPD3-212ENST00000534290 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
NCAPD3-212ENST00000534290 CFAP74Q9C0B2 1584 aa16.53■□□□□ 0.24
NCAPD3-212ENST00000534290 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
NCAPD3-212ENST00000534290 CDK13Q14004 1512 aaKnown RBP16.52■□□□□ 0.24
NCAPD3-212ENST00000534290 ZFYVE16Q7Z3T8 1539 aa16.52■□□□□ 0.24
NCAPD3-212ENST00000534290 CDK11AQ9UQ88 783 aaPredicted RBP16.52■□□□□ 0.24
NCAPD3-212ENST00000534290 RIMS1Q86UR5 1692 aaKnown RBP16.52■□□□□ 0.23
NCAPD3-212ENST00000534290 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
NCAPD3-212ENST00000534290 CEP162Q5TB80 1403 aa16.48■□□□□ 0.23
NCAPD3-212ENST00000534290 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
NCAPD3-212ENST00000534290 ATP10AO60312 1499 aa16.47■□□□□ 0.23
NCAPD3-212ENST00000534290 FMN1Q68DA7 1419 aa16.46■□□□□ 0.23
NCAPD3-212ENST00000534290 AFAP1Q8N556 730 aa16.46■□□□□ 0.23
NCAPD3-212ENST00000534290 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
NCAPD3-212ENST00000534290 CEBPAP49715 358 aaPredicted RBP16.44■□□□□ 0.22
NCAPD3-212ENST00000534290 CERKQ8TCT0 537 aa16.44■□□□□ 0.22
NCAPD3-212ENST00000534290 MYT1LQ9UL68 1186 aa16.43■□□□□ 0.22
NCAPD3-212ENST00000534290 ARHGAP35Q9NRY4 1499 aa16.42■□□□□ 0.22
NCAPD3-212ENST00000534290 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
NCAPD3-212ENST00000534290 ARHGEF12Q9NZN5 1544 aa16.4■□□□□ 0.22
NCAPD3-212ENST00000534290 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
NCAPD3-212ENST00000534290 FER1L4A9Z1Z3 1794 aa16.38■□□□□ 0.21
NCAPD3-212ENST00000534290 ZNF518AQ6AHZ1 1483 aa16.38■□□□□ 0.21
NCAPD3-212ENST00000534290 CLIP1P30622 1438 aa16.37■□□□□ 0.21
NCAPD3-212ENST00000534290 ARHGAP5Q13017 1502 aa16.37■□□□□ 0.21
NCAPD3-212ENST00000534290 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
NCAPD3-212ENST00000534290 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
NCAPD3-212ENST00000534290 KIF14Q15058 1648 aa16.36■□□□□ 0.21
NCAPD3-212ENST00000534290 APLP2Q06481 763 aa16.35■□□□□ 0.21
NCAPD3-212ENST00000534290 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
NCAPD3-212ENST00000534290 KDM5CP41229 1560 aa16.31■□□□□ 0.2
NCAPD3-212ENST00000534290 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
NCAPD3-212ENST00000534290 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
NCAPD3-212ENST00000534290 TRAPPC8Q9Y2L5 1435 aa16.29■□□□□ 0.2
NCAPD3-212ENST00000534290 PREX1Q8TCU6 1659 aa16.29■□□□□ 0.2
NCAPD3-212ENST00000534290 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
NCAPD3-212ENST00000534290 CASKIN1Q8WXD9 1431 aa16.27■□□□□ 0.19
NCAPD3-212ENST00000534290 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
NCAPD3-212ENST00000534290 ZNF777Q9ULD5 760 aaPredicted RBP16.26■□□□□ 0.19
NCAPD3-212ENST00000534290 REREQ9P2R6 1566 aa16.26■□□□□ 0.19
NCAPD3-212ENST00000534290 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
NCAPD3-212ENST00000534290 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
NCAPD3-212ENST00000534290 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
NCAPD3-212ENST00000534290 STRCQ7RTU9 1775 aa16.24■□□□□ 0.19
NCAPD3-212ENST00000534290 AGLP35573 1532 aa16.23■□□□□ 0.19
NCAPD3-212ENST00000534290 ABCA6Q8N139 1617 aa16.23■□□□□ 0.19
NCAPD3-212ENST00000534290 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
NCAPD3-212ENST00000534290 HNRNPMP52272 730 aaKnown RBP eCLIP16.22■□□□□ 0.19
NCAPD3-212ENST00000534290 ABCC1P33527 1531 aa16.22■□□□□ 0.19
NCAPD3-212ENST00000534290 PTPRTO14522 1441 aa16.21■□□□□ 0.19
NCAPD3-212ENST00000534290 PREX2Q70Z35 1606 aa16.2■□□□□ 0.18
NCAPD3-212ENST00000534290 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
NCAPD3-212ENST00000534290 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
NCAPD3-212ENST00000534290 C3P01024 1663 aa16.19■□□□□ 0.18
NCAPD3-212ENST00000534290 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
NCAPD3-212ENST00000534290 DISP3Q9P2K9 1392 aa16.17■□□□□ 0.18
NCAPD3-212ENST00000534290 CFDP1Q9UEE9 299 aaPredicted RBP16.17■□□□□ 0.18
NCAPD3-212ENST00000534290 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
NCAPD3-212ENST00000534290 KIDINS220Q9ULH0 1771 aa16.17■□□□□ 0.18
NCAPD3-212ENST00000534290 ITSN2Q9NZM3 1697 aa16.16■□□□□ 0.18
NCAPD3-212ENST00000534290 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
NCAPD3-212ENST00000534290 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
NCAPD3-212ENST00000534290 CDC42BPAQ5VT25 1732 aa16.14■□□□□ 0.17
NCAPD3-212ENST00000534290 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
NCAPD3-212ENST00000534290 ILDR2Q71H61 639 aa16.14■□□□□ 0.17
NCAPD3-212ENST00000534290 NPATQ14207 1427 aa16.13■□□□□ 0.17
NCAPD3-212ENST00000534290 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
NCAPD3-212ENST00000534290 GGT6Q6P531 493 aa16.13■□□□□ 0.17
NCAPD3-212ENST00000534290 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
NCAPD3-212ENST00000534290 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
NCAPD3-212ENST00000534290 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
NCAPD3-212ENST00000534290 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
NCAPD3-212ENST00000534290 LTBP4Q8N2S1 1624 aa16.1■□□□□ 0.17
NCAPD3-212ENST00000534290 PLEKHH2Q8IVE3 1493 aa16.09■□□□□ 0.17
NCAPD3-212ENST00000534290 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.17
NCAPD3-212ENST00000534290 SOCS7O14512 581 aa16.08■□□□□ 0.16
NCAPD3-212ENST00000534290 PPP6R1Q9UPN7 881 aa16.08■□□□□ 0.16
NCAPD3-212ENST00000534290 ZNF644Q9H582 1327 aaPredicted RBP16.08■□□□□ 0.16
NCAPD3-212ENST00000534290 A2MP01023 1474 aa16.08■□□□□ 0.16
NCAPD3-212ENST00000534290 PKD2Q13563 968 aa16.07■□□□□ 0.16
NCAPD3-212ENST00000534290 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
NCAPD3-212ENST00000534290 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
NCAPD3-212ENST00000534290 SUPT6HQ7KZ85 1726 aaKnown RBP16.07■□□□□ 0.16
NCAPD3-212ENST00000534290 ATP7AQ04656 1500 aa16.06■□□□□ 0.16
NCAPD3-212ENST00000534290 ZNF335Q9H4Z2 1342 aaPredicted RBP16.06■□□□□ 0.16
NCAPD3-212ENST00000534290 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
NCAPD3-212ENST00000534290 IQSEC2Q5JU85 1478 aa16.05■□□□□ 0.16
NCAPD3-212ENST00000534290 PTPRKQ15262 1439 aa16.05■□□□□ 0.16
NCAPD3-212ENST00000534290 UBAP1LF5GYI3 381 aa16.04■□□□□ 0.16
NCAPD3-212ENST00000534290 PLXNC1O60486 1568 aa16.03■□□□□ 0.16
NCAPD3-212ENST00000534290 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.15
NCAPD3-212ENST00000534290 INO80Q9ULG1 1556 aaPredicted RBP16.01■□□□□ 0.15
NCAPD3-212ENST00000534290 PLA2R1Q13018 1463 aa16■□□□□ 0.15
NCAPD3-212ENST00000534290 MBD5Q9P267 1494 aa15.99■□□□□ 0.15
NCAPD3-212ENST00000534290 DHX29Q7Z478 1369 aaKnown RBP15.99■□□□□ 0.15
NCAPD3-212ENST00000534290 TCOF1Q13428 1488 aaKnown RBP15.98■□□□□ 0.15
NCAPD3-212ENST00000534290 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
NCAPD3-212ENST00000534290 KIF3BO15066 747 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms