RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 IRX5P78411 483 aaPredicted RBP9.85□□□□□ -0.83
CHKA-208ENST00000533910 GOLGA2Q08379 1002 aa9.85□□□□□ -0.83
CHKA-208ENST00000533910 OCEL1Q9H607 264 aa9.85□□□□□ -0.83
CHKA-208ENST00000533910 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
CHKA-208ENST00000533910 POTEMA6NI47 508 aa9.82□□□□□ -0.84
CHKA-208ENST00000533910 SMARCA2P51531 1590 aa9.81□□□□□ -0.84
CHKA-208ENST00000533910 PSEN1P49768 467 aa9.81□□□□□ -0.84
CHKA-208ENST00000533910 MKRN3Q13064 507 aaKnown RBP9.81□□□□□ -0.84
CHKA-208ENST00000533910 POTEGQ6S5H5 508 aa9.8□□□□□ -0.84
CHKA-208ENST00000533910 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
CHKA-208ENST00000533910 FAM163AQ96GL9 167 aaPredicted RBP9.79□□□□□ -0.84
CHKA-208ENST00000533910 ATAD2BQ9ULI0 1458 aa9.79□□□□□ -0.84
CHKA-208ENST00000533910 SLAIN1Q8ND83 568 aa9.77□□□□□ -0.85
CHKA-208ENST00000533910 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
CHKA-208ENST00000533910 NBR1Q14596 966 aa9.74□□□□□ -0.85
CHKA-208ENST00000533910 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
CHKA-208ENST00000533910 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.73□□□□□ -0.85
CHKA-208ENST00000533910 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
CHKA-208ENST00000533910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.854e-12■□□□□ 10.4
CHKA-208ENST00000533910 L3MBTL3Q96JM7 780 aaPredicted RBP9.71□□□□□ -0.86
CHKA-208ENST00000533910 NCAPD3P42695 1498 aa9.71□□□□□ -0.86
CHKA-208ENST00000533910 PLSCR2Q9NRY7 297 aa9.7□□□□□ -0.86
CHKA-208ENST00000533910 CCDC88BA6NC98 1476 aa9.7□□□□□ -0.86
CHKA-208ENST00000533910 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
CHKA-208ENST00000533910 PDCD7Q8N8D1 485 aaKnown RBP9.69□□□□□ -0.86
CHKA-208ENST00000533910 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
CHKA-208ENST00000533910 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
CHKA-208ENST00000533910 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
CHKA-208ENST00000533910 CC2D2AQ9P2K1 1620 aa9.67□□□□□ -0.86
CHKA-208ENST00000533910 SNPHO15079 494 aa9.66□□□□□ -0.86
CHKA-208ENST00000533910 G3V3G9 751 aa9.64□□□□□ -0.87
CHKA-208ENST00000533910 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
CHKA-208ENST00000533910 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
CHKA-208ENST00000533910 ST18O60284 1047 aa9.61□□□□□ -0.87
CHKA-208ENST00000533910 RYDENQ9NUL5 291 aaKnown RBP9.6□□□□□ -0.87
CHKA-208ENST00000533910 PPP1R37O75864 691 aa9.59□□□□□ -0.87
CHKA-208ENST00000533910 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
CHKA-208ENST00000533910 EFCAB3Q8N7B9 438 aa9.57□□□□□ -0.88
CHKA-208ENST00000533910 BOLA1Q9Y3E2 137 aa9.57□□□□□ -0.88
CHKA-208ENST00000533910 PRDM2Q13029 1718 aa9.56□□□□□ -0.88
CHKA-208ENST00000533910 DPY19L2Q6NUT2 758 aa9.56□□□□□ -0.88
CHKA-208ENST00000533910 KCNV2Q8TDN2 545 aa9.54□□□□□ -0.88
CHKA-208ENST00000533910 PHF8Q9UPP1 1060 aa9.54□□□□□ -0.88
CHKA-208ENST00000533910 SOX12O15370 315 aa9.53□□□□□ -0.88
CHKA-208ENST00000533910 CDAN1Q8IWY9 1227 aa9.53□□□□□ -0.88
CHKA-208ENST00000533910 WDR70Q9NW82 654 aa9.51□□□□□ -0.89
CHKA-208ENST00000533910 FBXO22Q8NEZ5 403 aa9.5□□□□□ -0.89
CHKA-208ENST00000533910 ABCC8Q09428 1581 aa9.5□□□□□ -0.89
CHKA-208ENST00000533910 CFTRP13569 1480 aa9.49□□□□□ -0.89
CHKA-208ENST00000533910 NLRP6P59044 892 aa9.45□□□□□ -0.9
CHKA-208ENST00000533910 MARVELD3Q96A59 401 aa9.45□□□□□ -0.9
CHKA-208ENST00000533910 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
CHKA-208ENST00000533910 MS4A4AQ96JQ5 239 aa9.44□□□□□ -0.9
CHKA-208ENST00000533910 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
CHKA-208ENST00000533910 BIVM-ERCC5R4GMW8 1640 aa9.44□□□□□ -0.9
CHKA-208ENST00000533910 WRNQ14191 1432 aaPredicted RBP eCLIP9.43□□□□□ -0.9
CHKA-208ENST00000533910 EMP3P54852 163 aa9.43□□□□□ -0.9
CHKA-208ENST00000533910 CADPSQ9ULU8 1353 aa9.42□□□□□ -0.9
CHKA-208ENST00000533910 MICALL2Q8IY33 904 aa9.42□□□□□ -0.9
CHKA-208ENST00000533910 TOP2BQ02880 1626 aa9.42□□□□□ -0.9
CHKA-208ENST00000533910 DOK7Q18PE1 504 aa9.41□□□□□ -0.9
CHKA-208ENST00000533910 ZNF710Q8N1W2 664 aa9.41□□□□□ -0.9
CHKA-208ENST00000533910 LAMC3Q9Y6N6 1575 aa9.41□□□□□ -0.9
CHKA-208ENST00000533910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.4□□□□□ -0.9
CHKA-208ENST00000533910 NCKAP5LQ9HCH0 1330 aa9.39□□□□□ -0.91
CHKA-208ENST00000533910 RIMBP2O15034 1052 aa9.39□□□□□ -0.91
CHKA-208ENST00000533910 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
CHKA-208ENST00000533910 CUX1P39880 1505 aa9.36□□□□□ -0.91
CHKA-208ENST00000533910 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
CHKA-208ENST00000533910 E2F4Q16254 413 aa9.36□□□□□ -0.91
CHKA-208ENST00000533910 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
CHKA-208ENST00000533910 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
CHKA-208ENST00000533910 SEMA3EO15041 775 aa9.35□□□□□ -0.91
CHKA-208ENST00000533910 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
CHKA-208ENST00000533910 HS3ST6Q96QI5 342 aa9.34□□□□□ -0.91
CHKA-208ENST00000533910 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
CHKA-208ENST00000533910 NESP48681 1621 aa9.33□□□□□ -0.92
CHKA-208ENST00000533910 EEA1Q15075 1411 aa9.32□□□□□ -0.92
CHKA-208ENST00000533910 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
CHKA-208ENST00000533910 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
CHKA-208ENST00000533910 TMEM92Q6UXU6 159 aa9.31□□□□□ -0.92
CHKA-208ENST00000533910 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
CHKA-208ENST00000533910 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
CHKA-208ENST00000533910 PDE4AP27815 886 aa9.29□□□□□ -0.92
CHKA-208ENST00000533910 SOGA1O94964 1423 aa9.29□□□□□ -0.92
CHKA-208ENST00000533910 ERBB3P21860 1342 aa9.29□□□□□ -0.92
CHKA-208ENST00000533910 CEP164Q9UPV0 1460 aa9.28□□□□□ -0.92
CHKA-208ENST00000533910 SPNS2Q8IVW8 549 aa9.28□□□□□ -0.92
CHKA-208ENST00000533910 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
CHKA-208ENST00000533910 TESPA1A2RU30 521 aaPredicted RBP9.27□□□□□ -0.93
CHKA-208ENST00000533910 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
CHKA-208ENST00000533910 POTEB3A0JP26 581 aa9.26□□□□□ -0.93
CHKA-208ENST00000533910 MFSD10Q14728 455 aa9.26□□□□□ -0.93
CHKA-208ENST00000533910 POTEBQ6S5H4 581 aa9.26□□□□□ -0.93
CHKA-208ENST00000533910 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
CHKA-208ENST00000533910 TOPBP1Q92547 1522 aa9.26□□□□□ -0.93
CHKA-208ENST00000533910 KIF21BO75037 1637 aa9.25□□□□□ -0.93
CHKA-208ENST00000533910 MMRN1Q13201 1228 aa9.25□□□□□ -0.93
CHKA-208ENST00000533910 DDX27Q96GQ7 796 aaKnown RBP9.25□□□□□ -0.93
CHKA-208ENST00000533910 RUSC2Q8N2Y8 1516 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms