RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CFAP74Q9C0B2 1584 aa16.84■□□□□ 0.29
CHMP4A-206ENST00000533011 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
CHMP4A-206ENST00000533011 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
CHMP4A-206ENST00000533011 P3H3Q8IVL6 736 aa16.81■□□□□ 0.28
CHMP4A-206ENST00000533011 STRCQ7RTU9 1775 aa16.81■□□□□ 0.28
CHMP4A-206ENST00000533011 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
CHMP4A-206ENST00000533011 ATP10AO60312 1499 aa16.79■□□□□ 0.28
CHMP4A-206ENST00000533011 CEBPAP49715 358 aaPredicted RBP16.78■□□□□ 0.28
CHMP4A-206ENST00000533011 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
CHMP4A-206ENST00000533011 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
CHMP4A-206ENST00000533011 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
CHMP4A-206ENST00000533011 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
CHMP4A-206ENST00000533011 SAMD9Q5K651 1589 aa16.72■□□□□ 0.27
CHMP4A-206ENST00000533011 SCAPERQ9BY12 1400 aa16.72■□□□□ 0.27
CHMP4A-206ENST00000533011 SIGLEC1Q9BZZ2 1709 aa16.72■□□□□ 0.27
CHMP4A-206ENST00000533011 NUP153P49790 1475 aaKnown RBP16.71■□□□□ 0.27
CHMP4A-206ENST00000533011 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
CHMP4A-206ENST00000533011 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
CHMP4A-206ENST00000533011 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
CHMP4A-206ENST00000533011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP4A-206ENST00000533011 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
CHMP4A-206ENST00000533011 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
CHMP4A-206ENST00000533011 EFCAB2Q5VUJ9 269 aa16.68■□□□□ 0.26
CHMP4A-206ENST00000533011 PLCH2O75038 1416 aa16.68■□□□□ 0.26
CHMP4A-206ENST00000533011 TRAPPC8Q9Y2L5 1435 aa16.68■□□□□ 0.26
CHMP4A-206ENST00000533011 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
CHMP4A-206ENST00000533011 ZNF518AQ6AHZ1 1483 aa16.61■□□□□ 0.25
CHMP4A-206ENST00000533011 PKD2Q13563 968 aa16.6■□□□□ 0.25
CHMP4A-206ENST00000533011 CNTLNQ9NXG0 1405 aa16.6■□□□□ 0.25
CHMP4A-206ENST00000533011 MYT1LQ9UL68 1186 aa16.59■□□□□ 0.25
CHMP4A-206ENST00000533011 REREQ9P2R6 1566 aa16.58■□□□□ 0.24
CHMP4A-206ENST00000533011 AGLP35573 1532 aa16.56■□□□□ 0.24
CHMP4A-206ENST00000533011 ZNF335Q9H4Z2 1342 aaPredicted RBP16.56■□□□□ 0.24
CHMP4A-206ENST00000533011 TOM1O60784 492 aa16.56■□□□□ 0.24
CHMP4A-206ENST00000533011 CDK11AQ9UQ88 783 aaPredicted RBP16.56■□□□□ 0.24
CHMP4A-206ENST00000533011 NPATQ14207 1427 aa16.55■□□□□ 0.24
CHMP4A-206ENST00000533011 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
CHMP4A-206ENST00000533011 C3P01024 1663 aa16.55■□□□□ 0.24
CHMP4A-206ENST00000533011 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
CHMP4A-206ENST00000533011 ARHGAP35Q9NRY4 1499 aa16.54■□□□□ 0.24
CHMP4A-206ENST00000533011 CAMSAP1Q5T5Y3 1602 aa16.53■□□□□ 0.24
CHMP4A-206ENST00000533011 HSPA1LP34931 641 aa16.53■□□□□ 0.24
CHMP4A-206ENST00000533011 MLH3Q9UHC1 1453 aa16.52■□□□□ 0.23
CHMP4A-206ENST00000533011 KDM5CP41229 1560 aa16.51■□□□□ 0.23
CHMP4A-206ENST00000533011 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
CHMP4A-206ENST00000533011 NCKAP5LQ9HCH0 1330 aa16.51■□□□□ 0.23
CHMP4A-206ENST00000533011 FMN1Q68DA7 1419 aa16.5■□□□□ 0.23
CHMP4A-206ENST00000533011 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
CHMP4A-206ENST00000533011 SCAF1Q9H7N4 1312 aaKnown RBP16.48■□□□□ 0.23
CHMP4A-206ENST00000533011 DIP2CQ9Y2E4 1556 aa16.47■□□□□ 0.23
CHMP4A-206ENST00000533011 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
CHMP4A-206ENST00000533011 ZMYM3Q14202 1370 aa16.47■□□□□ 0.23
CHMP4A-206ENST00000533011 MYO5CQ9NQX4 1742 aa16.47■□□□□ 0.23
CHMP4A-206ENST00000533011 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
CHMP4A-206ENST00000533011 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
CHMP4A-206ENST00000533011 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
CHMP4A-206ENST00000533011 ATP1B4Q9UN42 357 aaPredicted RBP16.42■□□□□ 0.22
CHMP4A-206ENST00000533011 CLIP1P30622 1438 aa16.42■□□□□ 0.22
CHMP4A-206ENST00000533011 CDK13Q14004 1512 aaKnown RBP16.41■□□□□ 0.22
CHMP4A-206ENST00000533011 MROH2AA6NES4 1674 aa16.41■□□□□ 0.22
CHMP4A-206ENST00000533011 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
CHMP4A-206ENST00000533011 CPS1P31327 1500 aa16.4■□□□□ 0.22
CHMP4A-206ENST00000533011 ABCA6Q8N139 1617 aa16.38■□□□□ 0.21
CHMP4A-206ENST00000533011 KIF14Q15058 1648 aa16.37■□□□□ 0.21
CHMP4A-206ENST00000533011 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-206ENST00000533011 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
CHMP4A-206ENST00000533011 ZNF142P52746 1687 aaPredicted RBP16.35■□□□□ 0.21
CHMP4A-206ENST00000533011 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
CHMP4A-206ENST00000533011 CEP170BQ9Y4F5 1589 aaPredicted RBP16.34■□□□□ 0.21
CHMP4A-206ENST00000533011 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
CHMP4A-206ENST00000533011 LRRIQ1Q96JM4 1722 aa16.32■□□□□ 0.2
CHMP4A-206ENST00000533011 CEP162Q5TB80 1403 aa16.31■□□□□ 0.2
CHMP4A-206ENST00000533011 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
CHMP4A-206ENST00000533011 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
CHMP4A-206ENST00000533011 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
CHMP4A-206ENST00000533011 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
CHMP4A-206ENST00000533011 A2ML1A8K2U0 1454 aa16.29■□□□□ 0.2
CHMP4A-206ENST00000533011 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
CHMP4A-206ENST00000533011 ANKLE2Q86XL3 938 aa16.29■□□□□ 0.2
CHMP4A-206ENST00000533011 ABCC1P33527 1531 aa16.29■□□□□ 0.2
CHMP4A-206ENST00000533011 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
CHMP4A-206ENST00000533011 CDC42BPBQ9Y5S2 1711 aa16.26■□□□□ 0.19
CHMP4A-206ENST00000533011 GGT6Q6P531 493 aa16.25■□□□□ 0.19
CHMP4A-206ENST00000533011 THEMISQ8N1K5 641 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-206ENST00000533011 RGS17Q9UGC6 210 aaPredicted RBP16.25■□□□□ 0.19
CHMP4A-206ENST00000533011 ITSN2Q9NZM3 1697 aa16.24■□□□□ 0.19
CHMP4A-206ENST00000533011 CLTCQ00610 1675 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-206ENST00000533011 DNMT1P26358 1616 aaKnown RBP16.23■□□□□ 0.19
CHMP4A-206ENST00000533011 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
CHMP4A-206ENST00000533011 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.19
CHMP4A-206ENST00000533011 A2MP01023 1474 aa16.21■□□□□ 0.19
CHMP4A-206ENST00000533011 MED14O60244 1454 aa16.18■□□□□ 0.18
CHMP4A-206ENST00000533011 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-206ENST00000533011 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-206ENST00000533011 ALKQ9UM73 1620 aa16.18■□□□□ 0.18
CHMP4A-206ENST00000533011 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
CHMP4A-206ENST00000533011 PLXNC1O60486 1568 aa16.17■□□□□ 0.18
CHMP4A-206ENST00000533011 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
CHMP4A-206ENST00000533011 NEURL4Q96JN8 1562 aa16.17■□□□□ 0.18
CHMP4A-206ENST00000533011 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms