RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 EEA1Q15075 1411 aa24.21■■□□□ 1.47
CDC27-209ENST00000532893 SIGLEC1Q9BZZ2 1709 aa24.21■■□□□ 1.47
CDC27-209ENST00000532893 PLCH2O75038 1416 aa24.18■■□□□ 1.46
CDC27-209ENST00000532893 HECW1Q76N89 1606 aa24.18■■□□□ 1.46
CDC27-209ENST00000532893 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
CDC27-209ENST00000532893 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
CDC27-209ENST00000532893 CEBPAP49715 358 aaPredicted RBP24.16■■□□□ 1.46
CDC27-209ENST00000532893 EFCAB2Q5VUJ9 269 aa24.15■■□□□ 1.46
CDC27-209ENST00000532893 ATP10AO60312 1499 aa24.13■■□□□ 1.45
CDC27-209ENST00000532893 EHMT2Q96KQ7 1210 aa24.11■■□□□ 1.45
CDC27-209ENST00000532893 FER1L4A9Z1Z3 1794 aa24.11■■□□□ 1.45
CDC27-209ENST00000532893 C9orf84Q5VXU9 1444 aa24.09■■□□□ 1.45
CDC27-209ENST00000532893 ARHGEF12Q9NZN5 1544 aa24.08■■□□□ 1.45
CDC27-209ENST00000532893 AFAP1Q8N556 730 aa24.07■■□□□ 1.44
CDC27-209ENST00000532893 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
CDC27-209ENST00000532893 MYT1LQ9UL68 1186 aa24.06■■□□□ 1.44
CDC27-209ENST00000532893 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
CDC27-209ENST00000532893 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
CDC27-209ENST00000532893 FMN1Q68DA7 1419 aa24■■□□□ 1.43
CDC27-209ENST00000532893 ZNF518AQ6AHZ1 1483 aa23.99■■□□□ 1.43
CDC27-209ENST00000532893 DISP3Q9P2K9 1392 aa23.98■■□□□ 1.43
CDC27-209ENST00000532893 PREX1Q8TCU6 1659 aa23.98■■□□□ 1.43
CDC27-209ENST00000532893 UHRF1BP1Q6BDS2 1440 aa23.97■■□□□ 1.43
CDC27-209ENST00000532893 ILDR2Q71H61 639 aa23.97■■□□□ 1.43
CDC27-209ENST00000532893 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
CDC27-209ENST00000532893 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
CDC27-209ENST00000532893 TROQ12816 1431 aaPredicted RBP23.94■■□□□ 1.42
CDC27-209ENST00000532893 KIF14Q15058 1648 aa23.94■■□□□ 1.42
CDC27-209ENST00000532893 SETD1BQ9UPS6 1966 aaKnown RBP23.94■■□□□ 1.42
CDC27-209ENST00000532893 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
CDC27-209ENST00000532893 ARHGAP35Q9NRY4 1499 aa23.93■■□□□ 1.42
CDC27-209ENST00000532893 ESF1Q9H501 851 aaKnown RBP23.92■■□□□ 1.42
CDC27-209ENST00000532893 KDM5CP41229 1560 aa23.91■■□□□ 1.42
CDC27-209ENST00000532893 CLIP1P30622 1438 aa23.9■■□□□ 1.42
CDC27-209ENST00000532893 DIP2CQ9Y2E4 1556 aa23.86■■□□□ 1.41
CDC27-209ENST00000532893 PTPRTO14522 1441 aa23.86■■□□□ 1.41
CDC27-209ENST00000532893 SOCS7O14512 581 aa23.86■■□□□ 1.41
CDC27-209ENST00000532893 MLH3Q9UHC1 1453 aa23.85■■□□□ 1.41
CDC27-209ENST00000532893 TRAPPC8Q9Y2L5 1435 aa23.84■■□□□ 1.41
CDC27-209ENST00000532893 REREQ9P2R6 1566 aa23.82■■□□□ 1.4
CDC27-209ENST00000532893 ABCA6Q8N139 1617 aa23.81■■□□□ 1.4
CDC27-209ENST00000532893 C3P01024 1663 aa23.79■■□□□ 1.4
CDC27-209ENST00000532893 AGLP35573 1532 aa23.79■■□□□ 1.4
CDC27-209ENST00000532893 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
CDC27-209ENST00000532893 ZNF777Q9ULD5 760 aaPredicted RBP23.75■■□□□ 1.39
CDC27-209ENST00000532893 LRRIQ1Q96JM4 1722 aa23.75■■□□□ 1.39
CDC27-209ENST00000532893 LTBP4Q8N2S1 1624 aa23.74■■□□□ 1.39
CDC27-209ENST00000532893 NCOA1Q15788 1441 aa23.74■■□□□ 1.39
CDC27-209ENST00000532893 CNTLNQ9NXG0 1405 aa23.74■■□□□ 1.39
CDC27-209ENST00000532893 ABCC1P33527 1531 aa23.74■■□□□ 1.39
CDC27-209ENST00000532893 PREX2Q70Z35 1606 aa23.7■■□□□ 1.39
CDC27-209ENST00000532893 ZMYM3Q14202 1370 aa23.7■■□□□ 1.38
CDC27-209ENST00000532893 NCKAP5LQ9HCH0 1330 aa23.7■■□□□ 1.38
CDC27-209ENST00000532893 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
CDC27-209ENST00000532893 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
CDC27-209ENST00000532893 HNRNPMP52272 730 aaKnown RBP eCLIP23.69■■□□□ 1.38
CDC27-209ENST00000532893 ITSN2Q9NZM3 1697 aa23.68■■□□□ 1.38
CDC27-209ENST00000532893 CCDC18Q5T9S5 1454 aa23.68■■□□□ 1.38
CDC27-209ENST00000532893 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
CDC27-209ENST00000532893 SPATA31D1Q6ZQQ2 1576 aa23.67■■□□□ 1.38
CDC27-209ENST00000532893 IQSEC2Q5JU85 1478 aa23.66■■□□□ 1.38
CDC27-209ENST00000532893 NPATQ14207 1427 aa23.66■■□□□ 1.38
CDC27-209ENST00000532893 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
CDC27-209ENST00000532893 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
CDC27-209ENST00000532893 UBAP1LF5GYI3 381 aa23.63■■□□□ 1.37
CDC27-209ENST00000532893 SAMD9LQ8IVG5 1584 aa23.63■■□□□ 1.37
CDC27-209ENST00000532893 CDC42BPAQ5VT25 1732 aa23.61■■□□□ 1.37
CDC27-209ENST00000532893 GGT6Q6P531 493 aa23.6■■□□□ 1.37
CDC27-209ENST00000532893 PKD2Q13563 968 aa23.59■■□□□ 1.37
CDC27-209ENST00000532893 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
CDC27-209ENST00000532893 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
CDC27-209ENST00000532893 SYCP2Q9BX26 1530 aa23.58■■□□□ 1.36
CDC27-209ENST00000532893 MROH2AA6NES4 1674 aa23.56■■□□□ 1.36
CDC27-209ENST00000532893 SUPT6HQ7KZ85 1726 aaKnown RBP23.56■■□□□ 1.36
CDC27-209ENST00000532893 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
CDC27-209ENST00000532893 A2MP01023 1474 aa23.53■■□□□ 1.36
CDC27-209ENST00000532893 FYCO1Q9BQS8 1478 aa23.53■■□□□ 1.36
CDC27-209ENST00000532893 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
CDC27-209ENST00000532893 ATP7AQ04656 1500 aa23.52■■□□□ 1.36
CDC27-209ENST00000532893 CCNB3Q8WWL7 1395 aa23.51■■□□□ 1.35
CDC27-209ENST00000532893 CLTCQ00610 1675 aaKnown RBP23.51■■□□□ 1.35
CDC27-209ENST00000532893 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
CDC27-209ENST00000532893 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
CDC27-209ENST00000532893 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
CDC27-209ENST00000532893 PLEKHH2Q8IVE3 1493 aa23.49■■□□□ 1.35
CDC27-209ENST00000532893 ZNF644Q9H582 1327 aaPredicted RBP23.47■■□□□ 1.35
CDC27-209ENST00000532893 PLXNC1O60486 1568 aa23.46■■□□□ 1.35
CDC27-209ENST00000532893 CEP170BQ9Y4F5 1589 aaPredicted RBP23.46■■□□□ 1.35
CDC27-209ENST00000532893 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.34
CDC27-209ENST00000532893 ZNF142P52746 1687 aaPredicted RBP23.44■■□□□ 1.34
CDC27-209ENST00000532893 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
CDC27-209ENST00000532893 MTUS2Q5JR59 1369 aa23.43■■□□□ 1.34
CDC27-209ENST00000532893 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
CDC27-209ENST00000532893 PIP4K2BP78356 416 aa23.42■■□□□ 1.34
CDC27-209ENST00000532893 FBXO31Q5XUX0 539 aaPredicted RBP23.41■■□□□ 1.34
CDC27-209ENST00000532893 HSPA1LP34931 641 aa23.4■■□□□ 1.34
CDC27-209ENST00000532893 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
CDC27-209ENST00000532893 TOM1O60784 492 aa23.37■■□□□ 1.33
CDC27-209ENST00000532893 DHX29Q7Z478 1369 aaKnown RBP23.37■■□□□ 1.33
CDC27-209ENST00000532893 KIF3BO15066 747 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms