RNA–Protein interactions for RNA: ENST00000532590.1

FOXRED1-214, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-214ENST00000532590 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
FOXRED1-214ENST00000532590 PTPRTO14522 1441 aa10.27□□□□□ -0.77
FOXRED1-214ENST00000532590 HECW1Q76N89 1606 aa10.27□□□□□ -0.77
FOXRED1-214ENST00000532590 PLEKHD1A6NEE1 506 aa10.27□□□□□ -0.77
FOXRED1-214ENST00000532590 LTBP4Q8N2S1 1624 aa10.26□□□□□ -0.77
FOXRED1-214ENST00000532590 MAGI2Q86UL8 1455 aa10.26□□□□□ -0.77
FOXRED1-214ENST00000532590 CFAP74Q9C0B2 1584 aa10.26□□□□□ -0.77
FOXRED1-214ENST00000532590 SCAPERQ9BY12 1400 aa10.25□□□□□ -0.77
FOXRED1-214ENST00000532590 ATP10AO60312 1499 aa10.25□□□□□ -0.77
FOXRED1-214ENST00000532590 NUP153P49790 1475 aaKnown RBP10.25□□□□□ -0.77
FOXRED1-214ENST00000532590 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
FOXRED1-214ENST00000532590 C9orf84Q5VXU9 1444 aa10.24□□□□□ -0.77
FOXRED1-214ENST00000532590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
FOXRED1-214ENST00000532590 SCAF1Q9H7N4 1312 aaKnown RBP10.23□□□□□ -0.77
FOXRED1-214ENST00000532590 IQSEC2Q5JU85 1478 aa10.23□□□□□ -0.77
FOXRED1-214ENST00000532590 PRXQ9BXM0 1461 aa10.23□□□□□ -0.77
FOXRED1-214ENST00000532590 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
FOXRED1-214ENST00000532590 ZNF335Q9H4Z2 1342 aaPredicted RBP10.21□□□□□ -0.78
FOXRED1-214ENST00000532590 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
FOXRED1-214ENST00000532590 SAMD9Q5K651 1589 aa10.19□□□□□ -0.78
FOXRED1-214ENST00000532590 NCOA1Q15788 1441 aa10.19□□□□□ -0.78
FOXRED1-214ENST00000532590 HSPA1LP34931 641 aa10.19□□□□□ -0.78
FOXRED1-214ENST00000532590 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
FOXRED1-214ENST00000532590 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
FOXRED1-214ENST00000532590 MED1Q15648 1581 aaPredicted RBP10.18□□□□□ -0.78
FOXRED1-214ENST00000532590 AFAP1Q8N556 730 aa10.18□□□□□ -0.78
FOXRED1-214ENST00000532590 TRAPPC8Q9Y2L5 1435 aa10.17□□□□□ -0.78
FOXRED1-214ENST00000532590 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
FOXRED1-214ENST00000532590 PLCH2O75038 1416 aa10.16□□□□□ -0.78
FOXRED1-214ENST00000532590 C3P01024 1663 aa10.16□□□□□ -0.78
FOXRED1-214ENST00000532590 SETD1BQ9UPS6 1966 aaKnown RBP10.16□□□□□ -0.78
FOXRED1-214ENST00000532590 CAMSAP1Q5T5Y3 1602 aa10.15□□□□□ -0.78
FOXRED1-214ENST00000532590 CDK13Q14004 1512 aaKnown RBP10.14□□□□□ -0.79
FOXRED1-214ENST00000532590 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
FOXRED1-214ENST00000532590 ATP1B4Q9UN42 357 aaPredicted RBP10.14□□□□□ -0.79
FOXRED1-214ENST00000532590 ZNF518AQ6AHZ1 1483 aa10.13□□□□□ -0.79
FOXRED1-214ENST00000532590 DIP2CQ9Y2E4 1556 aa10.12□□□□□ -0.79
FOXRED1-214ENST00000532590 ARHGAP5Q13017 1502 aa10.1□□□□□ -0.79
FOXRED1-214ENST00000532590 ABCA6Q8N139 1617 aa10.09□□□□□ -0.79
FOXRED1-214ENST00000532590 TOM1O60784 492 aa10.09□□□□□ -0.79
FOXRED1-214ENST00000532590 PKD2Q13563 968 aa10.09□□□□□ -0.79
FOXRED1-214ENST00000532590 PPP6R1Q9UPN7 881 aa10.09□□□□□ -0.79
FOXRED1-214ENST00000532590 KDM5CP41229 1560 aa10.09□□□□□ -0.79
FOXRED1-214ENST00000532590 CNTLNQ9NXG0 1405 aa10.08□□□□□ -0.8
FOXRED1-214ENST00000532590 MYO5CQ9NQX4 1742 aa10.08□□□□□ -0.8
FOXRED1-214ENST00000532590 CSRNP3Q8WYN3 585 aa10.08□□□□□ -0.8
FOXRED1-214ENST00000532590 NPATQ14207 1427 aa10.07□□□□□ -0.8
FOXRED1-214ENST00000532590 REREQ9P2R6 1566 aa10.06□□□□□ -0.8
FOXRED1-214ENST00000532590 ZMYM3Q14202 1370 aa10.06□□□□□ -0.8
FOXRED1-214ENST00000532590 AGLP35573 1532 aa10.06□□□□□ -0.8
FOXRED1-214ENST00000532590 KIF14Q15058 1648 aa10.05□□□□□ -0.8
FOXRED1-214ENST00000532590 CDK11AQ9UQ88 783 aaPredicted RBP10.05□□□□□ -0.8
FOXRED1-214ENST00000532590 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
FOXRED1-214ENST00000532590 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
FOXRED1-214ENST00000532590 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
FOXRED1-214ENST00000532590 CEP170BQ9Y4F5 1589 aaPredicted RBP10.02□□□□□ -0.81
FOXRED1-214ENST00000532590 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.81
FOXRED1-214ENST00000532590 SUPT6HQ7KZ85 1726 aaKnown RBP10.02□□□□□ -0.81
FOXRED1-214ENST00000532590 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
FOXRED1-214ENST00000532590 CLIP1P30622 1438 aa10□□□□□ -0.81
FOXRED1-214ENST00000532590 MROH2AA6NES4 1674 aa10□□□□□ -0.81
FOXRED1-214ENST00000532590 SHANK2Q9UPX8 1470 aa10□□□□□ -0.81
FOXRED1-214ENST00000532590 CPS1P31327 1500 aa10□□□□□ -0.81
FOXRED1-214ENST00000532590 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 PTPRKQ15262 1439 aa9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 GGT6Q6P531 493 aa9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 RGS17Q9UGC6 210 aaPredicted RBP9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 ZNF777Q9ULD5 760 aaPredicted RBP9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 CLTCQ00610 1675 aaKnown RBP9.99□□□□□ -0.81
FOXRED1-214ENST00000532590 KIDINS220Q9ULH0 1771 aa9.98□□□□□ -0.81
FOXRED1-214ENST00000532590 ABCC1P33527 1531 aa9.98□□□□□ -0.81
FOXRED1-214ENST00000532590 SPAG9O60271 1321 aaKnown RBP9.97□□□□□ -0.81
FOXRED1-214ENST00000532590 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.81
FOXRED1-214ENST00000532590 CDC42BPBQ9Y5S2 1711 aa9.96□□□□□ -0.81
FOXRED1-214ENST00000532590 A2ML1A8K2U0 1454 aa9.96□□□□□ -0.82
FOXRED1-214ENST00000532590 ALKQ9UM73 1620 aa9.96□□□□□ -0.82
FOXRED1-214ENST00000532590 HNRNPMP52272 730 aaKnown RBP eCLIP9.95□□□□□ -0.82
FOXRED1-214ENST00000532590 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
FOXRED1-214ENST00000532590 DNMT1P26358 1616 aaKnown RBP9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 SAMD9LQ8IVG5 1584 aa9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 NEURL4Q96JN8 1562 aa9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 POTEAQ6S8J7 498 aa9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 ANKLE2Q86XL3 938 aa9.94□□□□□ -0.82
FOXRED1-214ENST00000532590 FBXO31Q5XUX0 539 aaPredicted RBP9.93□□□□□ -0.82
FOXRED1-214ENST00000532590 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
FOXRED1-214ENST00000532590 A2MP01023 1474 aa9.92□□□□□ -0.82
FOXRED1-214ENST00000532590 TNRQ92752 1358 aa9.92□□□□□ -0.82
FOXRED1-214ENST00000532590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.92□□□□□ -0.82
FOXRED1-214ENST00000532590 POLR1AO95602 1720 aaPredicted RBP9.92□□□□□ -0.82
FOXRED1-214ENST00000532590 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
FOXRED1-214ENST00000532590 SYCP2Q9BX26 1530 aa9.91□□□□□ -0.82
FOXRED1-214ENST00000532590 NPHP4O75161 1426 aaPredicted RBP9.9□□□□□ -0.82
FOXRED1-214ENST00000532590 ATP7AQ04656 1500 aa9.9□□□□□ -0.82
FOXRED1-214ENST00000532590 LRRC7Q96NW7 1537 aa9.89□□□□□ -0.83
FOXRED1-214ENST00000532590 THEMISQ8N1K5 641 aaPredicted RBP9.89□□□□□ -0.83
FOXRED1-214ENST00000532590 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
FOXRED1-214ENST00000532590 EEA1Q15075 1411 aa9.89□□□□□ -0.83
FOXRED1-214ENST00000532590 PLXNC1O60486 1568 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms