RNA–Protein interactions for RNA: ENST00000532289.1

PTP4A2-214, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-214ENST00000532289 ARHGEF12Q9NZN5 1544 aa33.58■■■□□ 2.97
PTP4A2-214ENST00000532289 NUP153P49790 1475 aaKnown RBP33.57■■■□□ 2.97
PTP4A2-214ENST00000532289 HECW1Q76N89 1606 aa33.55■■■□□ 2.96
PTP4A2-214ENST00000532289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.52■■■□□ 2.96
PTP4A2-214ENST00000532289 CEBPAP49715 358 aaPredicted RBP33.5■■■□□ 2.95
PTP4A2-214ENST00000532289 PLEKHD1A6NEE1 506 aa33.48■■■□□ 2.95
PTP4A2-214ENST00000532289 SETD1BQ9UPS6 1966 aaKnown RBP33.47■■■□□ 2.95
PTP4A2-214ENST00000532289 PTPRTO14522 1441 aa33.46■■■□□ 2.95
PTP4A2-214ENST00000532289 UHRF1BP1Q6BDS2 1440 aa33.45■■■□□ 2.94
PTP4A2-214ENST00000532289 ATP10AO60312 1499 aa33.44■■■□□ 2.94
PTP4A2-214ENST00000532289 LTBP4Q8N2S1 1624 aa33.44■■■□□ 2.94
PTP4A2-214ENST00000532289 IQSEC2Q5JU85 1478 aa33.42■■■□□ 2.94
PTP4A2-214ENST00000532289 C9orf84Q5VXU9 1444 aa33.4■■■□□ 2.94
PTP4A2-214ENST00000532289 SCAPERQ9BY12 1400 aa33.38■■■□□ 2.93
PTP4A2-214ENST00000532289 PLCH2O75038 1416 aa33.28■■■□□ 2.92
PTP4A2-214ENST00000532289 C3P01024 1663 aa33.24■■■□□ 2.91
PTP4A2-214ENST00000532289 NCOA1Q15788 1441 aa33.18■■■□□ 2.9
PTP4A2-214ENST00000532289 ZNF518AQ6AHZ1 1483 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 TRAPPC8Q9Y2L5 1435 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 MYO5CQ9NQX4 1742 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 EFCAB2Q5VUJ9 269 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 KDM5CP41229 1560 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 REREQ9P2R6 1566 aa33.12■■■□□ 2.89
PTP4A2-214ENST00000532289 RANGAP1P46060 587 aaPredicted RBP33.11■■■□□ 2.89
PTP4A2-214ENST00000532289 CDK13Q14004 1512 aaKnown RBP33.11■■■□□ 2.89
PTP4A2-214ENST00000532289 DIP2CQ9Y2E4 1556 aa33.09■■■□□ 2.89
PTP4A2-214ENST00000532289 UBAP1LF5GYI3 381 aa33.09■■■□□ 2.89
PTP4A2-214ENST00000532289 AFAP1Q8N556 730 aa33.05■■■□□ 2.88
PTP4A2-214ENST00000532289 CSRNP3Q8WYN3 585 aa33.04■■■□□ 2.88
PTP4A2-214ENST00000532289 CAMSAP1Q5T5Y3 1602 aa33.03■■■□□ 2.88
PTP4A2-214ENST00000532289 AGLP35573 1532 aa33.01■■■□□ 2.87
PTP4A2-214ENST00000532289 ZNF335Q9H4Z2 1342 aaPredicted RBP33.01■■■□□ 2.87
PTP4A2-214ENST00000532289 ABCA6Q8N139 1617 aa33■■■□□ 2.87
PTP4A2-214ENST00000532289 ESF1Q9H501 851 aaKnown RBP32.99■■■□□ 2.87
PTP4A2-214ENST00000532289 MED1Q15648 1581 aaPredicted RBP32.96■■■□□ 2.87
PTP4A2-214ENST00000532289 MYT1LQ9UL68 1186 aa32.96■■■□□ 2.87
PTP4A2-214ENST00000532289 MLH3Q9UHC1 1453 aa32.94■■■□□ 2.86
PTP4A2-214ENST00000532289 CNTLNQ9NXG0 1405 aa32.94■■■□□ 2.86
PTP4A2-214ENST00000532289 NCKAP5LQ9HCH0 1330 aa32.93■■■□□ 2.86
PTP4A2-214ENST00000532289 ARHGAP5Q13017 1502 aa32.92■■■□□ 2.86
PTP4A2-214ENST00000532289 KIF14Q15058 1648 aa32.91■■■□□ 2.86
PTP4A2-214ENST00000532289 NPATQ14207 1427 aa32.9■■■□□ 2.86
PTP4A2-214ENST00000532289 MROH2AA6NES4 1674 aa32.86■■■□□ 2.85
PTP4A2-214ENST00000532289 HSPA1LP34931 641 aa32.84■■■□□ 2.85
PTP4A2-214ENST00000532289 PLA2R1Q13018 1463 aa32.81■■■□□ 2.84
PTP4A2-214ENST00000532289 PKD2Q13563 968 aa32.81■■■□□ 2.84
PTP4A2-214ENST00000532289 CDC42BPBQ9Y5S2 1711 aa32.8■■■□□ 2.84
PTP4A2-214ENST00000532289 ZNF142P52746 1687 aaPredicted RBP32.79■■■□□ 2.84
PTP4A2-214ENST00000532289 CDK11AQ9UQ88 783 aaPredicted RBP32.79■■■□□ 2.84
PTP4A2-214ENST00000532289 TCOF1Q13428 1488 aaKnown RBP32.79■■■□□ 2.84
PTP4A2-214ENST00000532289 KIDINS220Q9ULH0 1771 aa32.78■■■□□ 2.84
PTP4A2-214ENST00000532289 ZMYM3Q14202 1370 aa32.77■■■□□ 2.84
PTP4A2-214ENST00000532289 SUPT6HQ7KZ85 1726 aaKnown RBP32.77■■■□□ 2.84
PTP4A2-214ENST00000532289 TROQ12816 1431 aaPredicted RBP32.76■■■□□ 2.83
PTP4A2-214ENST00000532289 MYO3AQ8NEV4 1616 aa32.73■■■□□ 2.83
PTP4A2-214ENST00000532289 ABCC1P33527 1531 aa32.73■■■□□ 2.83
PTP4A2-214ENST00000532289 ITSN2Q9NZM3 1697 aa32.73■■■□□ 2.83
PTP4A2-214ENST00000532289 ATP1B4Q9UN42 357 aaPredicted RBP32.73■■■□□ 2.83
PTP4A2-214ENST00000532289 SCAF1Q9H7N4 1312 aaKnown RBP32.71■■■□□ 2.83
PTP4A2-214ENST00000532289 PIP4K2BP78356 416 aa32.7■■■□□ 2.83
PTP4A2-214ENST00000532289 CEP170BQ9Y4F5 1589 aaPredicted RBP32.7■■■□□ 2.82
PTP4A2-214ENST00000532289 PPP6R1Q9UPN7 881 aa32.68■■■□□ 2.82
PTP4A2-214ENST00000532289 CLIP1P30622 1438 aa32.68■■■□□ 2.82
PTP4A2-214ENST00000532289 FMN1Q68DA7 1419 aa32.67■■■□□ 2.82
PTP4A2-214ENST00000532289 PREX2Q70Z35 1606 aa32.66■■■□□ 2.82
PTP4A2-214ENST00000532289 TOM1O60784 492 aa32.66■■■□□ 2.82
PTP4A2-214ENST00000532289 EEA1Q15075 1411 aa32.66■■■□□ 2.82
PTP4A2-214ENST00000532289 PHF23Q9BUL5 403 aaPredicted RBP32.65■■■□□ 2.82
PTP4A2-214ENST00000532289 CLTCQ00610 1675 aaKnown RBP32.64■■■□□ 2.82
PTP4A2-214ENST00000532289 PTPRKQ15262 1439 aa32.61■■■□□ 2.81
PTP4A2-214ENST00000532289 CPS1P31327 1500 aa32.6■■■□□ 2.81
PTP4A2-214ENST00000532289 LRRIQ1Q96JM4 1722 aa32.6■■■□□ 2.81
PTP4A2-214ENST00000532289 SAMD9LQ8IVG5 1584 aa32.56■■■□□ 2.8
PTP4A2-214ENST00000532289 SHANK2Q9UPX8 1470 aa32.52■■■□□ 2.8
PTP4A2-214ENST00000532289 DNMT1P26358 1616 aaKnown RBP32.51■■■□□ 2.79
PTP4A2-214ENST00000532289 POLR1AO95602 1720 aaPredicted RBP32.5■■■□□ 2.79
PTP4A2-214ENST00000532289 ARHGAP35Q9NRY4 1499 aa32.49■■■□□ 2.79
PTP4A2-214ENST00000532289 CDC42BPAQ5VT25 1732 aa32.49■■■□□ 2.79
PTP4A2-214ENST00000532289 ALKQ9UM73 1620 aa32.49■■■□□ 2.79
PTP4A2-214ENST00000532289 A2ML1A8K2U0 1454 aa32.48■■■□□ 2.79
PTP4A2-214ENST00000532289 PLXNC1O60486 1568 aa32.48■■■□□ 2.79
PTP4A2-214ENST00000532289 NEURL4Q96JN8 1562 aa32.47■■■□□ 2.79
PTP4A2-214ENST00000532289 SPAG9O60271 1321 aaKnown RBP32.43■■■□□ 2.78
PTP4A2-214ENST00000532289 A2MP01023 1474 aa32.39■■■□□ 2.78
PTP4A2-214ENST00000532289 ATP7AQ04656 1500 aa32.39■■■□□ 2.78
PTP4A2-214ENST00000532289 SYCP2Q9BX26 1530 aa32.39■■■□□ 2.78
PTP4A2-214ENST00000532289 VWDEQ8N2E2 1590 aa32.39■■■□□ 2.78
PTP4A2-214ENST00000532289 GGT6Q6P531 493 aa32.38■■■□□ 2.77
PTP4A2-214ENST00000532289 INO80Q9ULG1 1556 aaPredicted RBP32.36■■■□□ 2.77
PTP4A2-214ENST00000532289 RGS17Q9UGC6 210 aaPredicted RBP32.34■■■□□ 2.77
PTP4A2-214ENST00000532289 ZNF777Q9ULD5 760 aaPredicted RBP32.33■■■□□ 2.77
PTP4A2-214ENST00000532289 HNRNPMP52272 730 aaKnown RBP eCLIP32.32■■■□□ 2.76
PTP4A2-214ENST00000532289 CCDC18Q5T9S5 1454 aa32.29■■■□□ 2.76
PTP4A2-214ENST00000532289 UBTFP17480 764 aaKnown RBP32.28■■■□□ 2.76
PTP4A2-214ENST00000532289 SENP3Q9H4L4 574 aaPredicted RBP32.26■■■□□ 2.75
PTP4A2-214ENST00000532289 ADGBQ8N7X0 1667 aa32.25■■■□□ 2.75
PTP4A2-214ENST00000532289 ANKLE2Q86XL3 938 aa32.25■■■□□ 2.75
PTP4A2-214ENST00000532289 KIAA1107Q9UPP5 1409 aa32.25■■■□□ 2.75
PTP4A2-214ENST00000532289 GPATCH8Q9UKJ3 1502 aaKnown RBP32.24■■■□□ 2.75
PTP4A2-214ENST00000532289 TNRQ92752 1358 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms