RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ANP32CO43423 234 aa23.79■■□□□ 1.4
VPS26B-206ENST00000531741 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
VPS26B-206ENST00000531741 HIRIP3Q9BW71 556 aaPredicted RBP23.79■■□□□ 1.4
VPS26B-206ENST00000531741 SUPT16HQ9Y5B9 1047 aaKnown RBP23.79■■□□□ 1.4
VPS26B-206ENST00000531741 ARID3CA6NKF2 412 aa23.77■■□□□ 1.4
VPS26B-206ENST00000531741 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
VPS26B-206ENST00000531741 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
VPS26B-206ENST00000531741 ANKRD30BQ9BXX2 1392 aa23.73■■□□□ 1.39
VPS26B-206ENST00000531741 PLB1Q6P1J6 1458 aa23.72■■□□□ 1.39
VPS26B-206ENST00000531741 PRG4Q92954 1404 aaPredicted RBP23.72■■□□□ 1.39
VPS26B-206ENST00000531741 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
VPS26B-206ENST00000531741 RPRD2Q5VT52 1461 aaKnown RBP23.72■■□□□ 1.39
VPS26B-206ENST00000531741 ADGBQ8N7X0 1667 aa23.71■■□□□ 1.39
VPS26B-206ENST00000531741 GPATCH8Q9UKJ3 1502 aaKnown RBP23.7■■□□□ 1.39
VPS26B-206ENST00000531741 ADGRL2O95490 1459 aa23.69■■□□□ 1.38
VPS26B-206ENST00000531741 ZNF644Q9H582 1327 aaPredicted RBP23.69■■□□□ 1.38
VPS26B-206ENST00000531741 CROCC2H7BZ55 1655 aa23.69■■□□□ 1.38
VPS26B-206ENST00000531741 KIF14Q15058 1648 aa23.66■■□□□ 1.38
VPS26B-206ENST00000531741 ABCA8O94911 1581 aa23.66■■□□□ 1.38
VPS26B-206ENST00000531741 JPH4Q96JJ6 628 aa23.66■■□□□ 1.38
VPS26B-206ENST00000531741 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
VPS26B-206ENST00000531741 NCOA1Q15788 1441 aa23.65■■□□□ 1.38
VPS26B-206ENST00000531741 L3MBTL2Q969R5 705 aa23.64■■□□□ 1.38
VPS26B-206ENST00000531741 HSPA5P11021 654 aaKnown RBP23.64■■□□□ 1.37
VPS26B-206ENST00000531741 CFDP1Q9UEE9 299 aaPredicted RBP23.64■■□□□ 1.37
VPS26B-206ENST00000531741 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.37
VPS26B-206ENST00000531741 PZPP20742 1482 aa23.61■■□□□ 1.37
VPS26B-206ENST00000531741 WASHC2AQ641Q2 1341 aa23.6■■□□□ 1.37
VPS26B-206ENST00000531741 SLC4A1APQ9BWU0 796 aaKnown RBP23.58■■□□□ 1.36
VPS26B-206ENST00000531741 FOXD1Q16676 465 aa23.57■■□□□ 1.36
VPS26B-206ENST00000531741 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
VPS26B-206ENST00000531741 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
VPS26B-206ENST00000531741 CDC42BPAQ5VT25 1732 aa23.56■■□□□ 1.36
VPS26B-206ENST00000531741 FBLN2P98095 1184 aa23.56■■□□□ 1.36
VPS26B-206ENST00000531741 ANKRD30AQ9BXX3 1397 aa23.55■■□□□ 1.36
VPS26B-206ENST00000531741 ATP10BO94823 1461 aa23.54■■□□□ 1.36
VPS26B-206ENST00000531741 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
VPS26B-206ENST00000531741 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
VPS26B-206ENST00000531741 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.35
VPS26B-206ENST00000531741 SPATA31E1Q6ZUB1 1445 aa23.51■■□□□ 1.35
VPS26B-206ENST00000531741 KIAA1107Q9UPP5 1409 aa23.51■■□□□ 1.35
VPS26B-206ENST00000531741 MBD5Q9P267 1494 aa23.5■■□□□ 1.35
VPS26B-206ENST00000531741 NBPF8Q3BBV2 869 aa23.49■■□□□ 1.35
VPS26B-206ENST00000531741 CCDC7Q96M83 1385 aa23.49■■□□□ 1.35
VPS26B-206ENST00000531741 ANKRD50Q9ULJ7 1429 aa23.47■■□□□ 1.35
VPS26B-206ENST00000531741 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.35
VPS26B-206ENST00000531741 KDM5DQ9BY66 1539 aa23.45■■□□□ 1.34
VPS26B-206ENST00000531741 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
VPS26B-206ENST00000531741 C9orf84Q5VXU9 1444 aa23.44■■□□□ 1.34
VPS26B-206ENST00000531741 C11orf95C9JLR9 678 aaPredicted RBP23.4■■□□□ 1.34
VPS26B-206ENST00000531741 FKBP8Q14318 412 aa23.39■■□□□ 1.34
VPS26B-206ENST00000531741 PTPRGP23470 1445 aa23.39■■□□□ 1.33
VPS26B-206ENST00000531741 NEFLP07196 543 aa23.38■■□□□ 1.33
VPS26B-206ENST00000531741 PKD2Q13563 968 aa23.37■■□□□ 1.33
VPS26B-206ENST00000531741 UHRF1BP1Q6BDS2 1440 aa23.35■■□□□ 1.33
VPS26B-206ENST00000531741 PREX2Q70Z35 1606 aa23.35■■□□□ 1.33
VPS26B-206ENST00000531741 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
VPS26B-206ENST00000531741 SHROOM2Q13796 1616 aa23.34■■□□□ 1.33
VPS26B-206ENST00000531741 KIF7Q2M1P5 1343 aa23.34■■□□□ 1.33
VPS26B-206ENST00000531741 PRKRIP1Q9H875 184 aaPredicted RBP23.34■■□□□ 1.33
VPS26B-206ENST00000531741 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
VPS26B-206ENST00000531741 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
VPS26B-206ENST00000531741 CDC42BPBQ9Y5S2 1711 aa23.32■■□□□ 1.32
VPS26B-206ENST00000531741 NUP155O75694 1391 aa23.32■■□□□ 1.32
VPS26B-206ENST00000531741 SAMD9LQ8IVG5 1584 aa23.31■■□□□ 1.32
VPS26B-206ENST00000531741 CHD1O14646 1710 aa23.31■■□□□ 1.32
VPS26B-206ENST00000531741 CCDC141Q6ZP82 1450 aa23.31■■□□□ 1.32
VPS26B-206ENST00000531741 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
VPS26B-206ENST00000531741 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
VPS26B-206ENST00000531741 TSHZ2Q9NRE2 1034 aa23.3■■□□□ 1.32
VPS26B-206ENST00000531741 KIF15Q9NS87 1388 aa23.3■■□□□ 1.32
VPS26B-206ENST00000531741 ARID4BQ4LE39 1312 aaPredicted RBP23.3■■□□□ 1.32
VPS26B-206ENST00000531741 KDM5CP41229 1560 aa23.29■■□□□ 1.32
VPS26B-206ENST00000531741 RALGAPBQ86X10 1494 aa23.29■■□□□ 1.32
VPS26B-206ENST00000531741 USP47Q96K76 1375 aa23.27■■□□□ 1.32
VPS26B-206ENST00000531741 MAST1Q9Y2H9 1570 aa23.26■■□□□ 1.31
VPS26B-206ENST00000531741 MYT1Q01538 1121 aa23.26■■□□□ 1.31
VPS26B-206ENST00000531741 BCORL1Q5H9F3 1711 aa23.24■■□□□ 1.31
VPS26B-206ENST00000531741 HNRNPMP52272 730 aaKnown RBP eCLIP23.23■■□□□ 1.31
VPS26B-206ENST00000531741 BCANQ96GW7 911 aa23.23■■□□□ 1.31
VPS26B-206ENST00000531741 CCDC184Q52MB2 194 aa23.2■■□□□ 1.3
VPS26B-206ENST00000531741 DHX29Q7Z478 1369 aaKnown RBP23.2■■□□□ 1.3
VPS26B-206ENST00000531741 ABCC2Q92887 1545 aa23.19■■□□□ 1.3
VPS26B-206ENST00000531741 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
VPS26B-206ENST00000531741 UNC13BO14795 1591 aa23.18■■□□□ 1.3
VPS26B-206ENST00000531741 TTC37Q6PGP7 1564 aa23.18■■□□□ 1.3
VPS26B-206ENST00000531741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
VPS26B-206ENST00000531741 ROCK2O75116 1388 aaKnown RBP23.18■■□□□ 1.3
VPS26B-206ENST00000531741 PLEKHH2Q8IVE3 1493 aa23.17■■□□□ 1.3
VPS26B-206ENST00000531741 MRS2Q9HD23 443 aa23.17■■□□□ 1.3
VPS26B-206ENST00000531741 PLXNC1O60486 1568 aa23.16■■□□□ 1.3
VPS26B-206ENST00000531741 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
VPS26B-206ENST00000531741 MYO5CQ9NQX4 1742 aa23.15■■□□□ 1.3
VPS26B-206ENST00000531741 ZBED9Q6R2W3 1325 aa23.15■■□□□ 1.3
VPS26B-206ENST00000531741 ARHGAP5Q13017 1502 aa23.14■■□□□ 1.3
VPS26B-206ENST00000531741 ERICH6BQ5W0A0 696 aa23.14■■□□□ 1.29
VPS26B-206ENST00000531741 ZNF326Q5BKZ1 582 aaKnown RBP23.12■■□□□ 1.29
VPS26B-206ENST00000531741 IQGAP3Q86VI3 1631 aa23.09■■□□□ 1.29
VPS26B-206ENST00000531741 CARD11Q9BXL7 1154 aa23.09■■□□□ 1.29
VPS26B-206ENST00000531741 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms