RNA–Protein interactions for RNA: ENST00000531695.1

CHD7-210, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-210ENST00000531695 C3orf67Q6ZVT6 689 aa9.15□□□□□ -0.94
CHD7-210ENST00000531695 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.95
CHD7-210ENST00000531695 EEA1Q15075 1411 aa9.14□□□□□ -0.95
CHD7-210ENST00000531695 BOLA1Q9Y3E2 137 aa9.13□□□□□ -0.95
CHD7-210ENST00000531695 RIOK3O14730 519 aaKnown RBP9.12□□□□□ -0.95
CHD7-210ENST00000531695 EFCAB3Q8N7B9 438 aa9.12□□□□□ -0.95
CHD7-210ENST00000531695 ABCC8Q09428 1581 aa9.12□□□□□ -0.95
CHD7-210ENST00000531695 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
CHD7-210ENST00000531695 SOX12O15370 315 aa9.1□□□□□ -0.95
CHD7-210ENST00000531695 VGFO15240 615 aaPredicted RBP9.09□□□□□ -0.95
CHD7-210ENST00000531695 HOXB3P14651 431 aaPredicted RBP9.07□□□□□ -0.96
CHD7-210ENST00000531695 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
CHD7-210ENST00000531695 FAM9AQ8IZU1 332 aaPredicted RBP9.06□□□□□ -0.96
CHD7-210ENST00000531695 ZFP91Q96JP5 570 aaPredicted RBP9.06□□□□□ -0.96
CHD7-210ENST00000531695 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
CHD7-210ENST00000531695 MS4A4AQ96JQ5 239 aa9.05□□□□□ -0.96
CHD7-210ENST00000531695 KIF21BO75037 1637 aa9.04□□□□□ -0.96
CHD7-210ENST00000531695 ATAD2BQ9ULI0 1458 aa9.03□□□□□ -0.96
CHD7-210ENST00000531695 MARVELD3Q96A59 401 aa9.02□□□□□ -0.97
CHD7-210ENST00000531695 SYNJ1O43426 1573 aa9.01□□□□□ -0.97
CHD7-210ENST00000531695 SOGA1O94964 1423 aa9.01□□□□□ -0.97
CHD7-210ENST00000531695 MICALL2Q8IY33 904 aa9.01□□□□□ -0.97
CHD7-210ENST00000531695 GOLGA3Q08378 1498 aa9.01□□□□□ -0.97
CHD7-210ENST00000531695 CEP162Q5TB80 1403 aa9□□□□□ -0.97
CHD7-210ENST00000531695 POTEB3A0JP26 581 aa9□□□□□ -0.97
CHD7-210ENST00000531695 G3V3G9 751 aa9□□□□□ -0.97
CHD7-210ENST00000531695 POTEBQ6S5H4 581 aa9□□□□□ -0.97
CHD7-210ENST00000531695 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
CHD7-210ENST00000531695 HOXB1P14653 301 aaPredicted RBP8.99□□□□□ -0.97
CHD7-210ENST00000531695 FBXO22Q8NEZ5 403 aa8.99□□□□□ -0.97
CHD7-210ENST00000531695 TAOK2Q9UL54 1235 aa8.99□□□□□ -0.97
CHD7-210ENST00000531695 BIVM-ERCC5R4GMW8 1640 aa8.98□□□□□ -0.97
CHD7-210ENST00000531695 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
CHD7-210ENST00000531695 BAZ1BQ9UIG0 1483 aaKnown RBP8.97□□□□□ -0.97
CHD7-210ENST00000531695 EMP3P54852 163 aa8.97□□□□□ -0.97
CHD7-210ENST00000531695 PKD2Q13563 968 aa8.97□□□□□ -0.97
CHD7-210ENST00000531695 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
CHD7-210ENST00000531695 HMGXB3Q12766 1538 aa8.96□□□□□ -0.97
CHD7-210ENST00000531695 RUSC2Q8N2Y8 1516 aa8.96□□□□□ -0.97
CHD7-210ENST00000531695 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.98
CHD7-210ENST00000531695 KRTAP3-3Q9BYR6 98 aa8.96□□□□□ -0.98
CHD7-210ENST00000531695 KRTAP3-2Q9BYR7 98 aa8.96□□□□□ -0.98
CHD7-210ENST00000531695 CEP164Q9UPV0 1460 aa8.96□□□□□ -0.98
CHD7-210ENST00000531695 TOP2BQ02880 1626 aa8.95□□□□□ -0.98
CHD7-210ENST00000531695 DOK7Q18PE1 504 aa8.95□□□□□ -0.98
CHD7-210ENST00000531695 NLRP6P59044 892 aa8.94□□□□□ -0.98
CHD7-210ENST00000531695 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
CHD7-210ENST00000531695 MMRN1Q13201 1228 aa8.93□□□□□ -0.98
CHD7-210ENST00000531695 MFRPQ9BY79 579 aa8.93□□□□□ -0.98
CHD7-210ENST00000531695 BCL11BQ9C0K0 894 aaPredicted RBP8.93□□□□□ -0.98
CHD7-210ENST00000531695 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
CHD7-210ENST00000531695 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
CHD7-210ENST00000531695 NCAPD3P42695 1498 aa8.9□□□□□ -0.98
CHD7-210ENST00000531695 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
CHD7-210ENST00000531695 ERICH3Q5RHP9 1530 aa8.9□□□□□ -0.99
CHD7-210ENST00000531695 KIF3CO14782 793 aa8.89□□□□□ -0.99
CHD7-210ENST00000531695 ECM2O94769 699 aaPredicted RBP8.89□□□□□ -0.99
CHD7-210ENST00000531695 RGL2O15211 777 aa8.88□□□□□ -0.99
CHD7-210ENST00000531695 ZNF710Q8N1W2 664 aa8.88□□□□□ -0.99
CHD7-210ENST00000531695 STK24Q9Y6E0 443 aa8.88□□□□□ -0.99
CHD7-210ENST00000531695 RIMBP2O15034 1052 aa8.87□□□□□ -0.99
CHD7-210ENST00000531695 VPS8Q8N3P4 1428 aa8.86□□□□□ -0.99
CHD7-210ENST00000531695 STK25O00506 426 aa8.85□□□□□ -0.99
CHD7-210ENST00000531695 CLIP1P30622 1438 aa8.84□□□□□ -0.99
CHD7-210ENST00000531695 PRXQ9BXM0 1461 aa8.83□□□□□ -1
CHD7-210ENST00000531695 RAPGEF2Q9Y4G8 1499 aa8.83□□□□□ -1
CHD7-210ENST00000531695 ERBB3P21860 1342 aa8.81□□□□□ -1
CHD7-210ENST00000531695 ZNF687Q8N1G0 1237 aa8.81□□□□□ -1
CHD7-210ENST00000531695 CFTRP13569 1480 aa8.81□□□□□ -1
CHD7-210ENST00000531695 CUX1P39880 1505 aa8.8□□□□□ -1
CHD7-210ENST00000531695 SLC34A2O95436 690 aa8.8□□□□□ -1
CHD7-210ENST00000531695 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
CHD7-210ENST00000531695 C2orf72A6NCS6 295 aa8.78□□□□□ -1
CHD7-210ENST00000531695 DNAJC5Q9H3Z4 198 aa8.78□□□□□ -1
CHD7-210ENST00000531695 VARS2Q5ST30 1063 aaKnown RBP8.77□□□□□ -1.01
CHD7-210ENST00000531695 CCER1Q8TC90 406 aaPredicted RBP8.77□□□□□ -1.01
CHD7-210ENST00000531695 ARAP1Q96P48 1450 aa8.77□□□□□ -1.01
CHD7-210ENST00000531695 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
CHD7-210ENST00000531695 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
CHD7-210ENST00000531695 KIF27Q86VH2 1401 aa8.74□□□□□ -1.01
CHD7-210ENST00000531695 PPP1R37O75864 691 aa8.74□□□□□ -1.01
CHD7-210ENST00000531695 ZNF316A6NFI3 1004 aaPredicted RBP8.73□□□□□ -1.01
CHD7-210ENST00000531695 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
CHD7-210ENST00000531695 CUX2O14529 1486 aa8.7□□□□□ -1.02
CHD7-210ENST00000531695 MAP3K1Q13233 1512 aa8.7□□□□□ -1.02
CHD7-210ENST00000531695 KHSRPQ92945 711 aaKnown RBP eCLIP8.7□□□□□ -1.02
CHD7-210ENST00000531695 RRBP1Q9P2E9 1410 aaKnown RBP8.69□□□□□ -1.02
CHD7-210ENST00000531695 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
CHD7-210ENST00000531695 CLSPNQ9HAW4 1339 aa8.68□□□□□ -1.02
CHD7-210ENST00000531695 PTGER2P43116 358 aa8.67□□□□□ -1.02
CHD7-210ENST00000531695 FOXK1P85037 733 aa8.67□□□□□ -1.02
CHD7-210ENST00000531695 TMC2Q8TDI7 906 aa8.67□□□□□ -1.02
CHD7-210ENST00000531695 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
CHD7-210ENST00000531695 ARHGAP35Q9NRY4 1499 aa8.67□□□□□ -1.02
CHD7-210ENST00000531695 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
CHD7-210ENST00000531695 GPHNQ9NQX3 736 aaPredicted RBP8.65□□□□□ -1.02
CHD7-210ENST00000531695 PBX2P40425 430 aa8.64□□□□□ -1.03
CHD7-210ENST00000531695 DIEXFQ68CQ4 756 aaKnown RBP8.64□□□□□ -1.03
CHD7-210ENST00000531695 POTEEQ6S8J3 1075 aa8.64□□□□□ -1.03
CHD7-210ENST00000531695 CFAP43Q8NDM7 1665 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms