RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 P3H3Q8IVL6 736 aa19.55■□□□□ 0.72
PSMC3-211ENST00000531653 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
PSMC3-211ENST00000531653 IQSEC2Q5JU85 1478 aa19.54■□□□□ 0.72
PSMC3-211ENST00000531653 PTPRTO14522 1441 aa19.54■□□□□ 0.72
PSMC3-211ENST00000531653 PLPPR3Q6T4P5 718 aa19.54■□□□□ 0.72
PSMC3-211ENST00000531653 ATP10AO60312 1499 aa19.5■□□□□ 0.71
PSMC3-211ENST00000531653 MLECQ14165 292 aa19.49■□□□□ 0.71
PSMC3-211ENST00000531653 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
PSMC3-211ENST00000531653 UHRF1BP1Q6BDS2 1440 aa19.47■□□□□ 0.71
PSMC3-211ENST00000531653 PLEKHD1A6NEE1 506 aa19.46■□□□□ 0.71
PSMC3-211ENST00000531653 CEBPAP49715 358 aaPredicted RBP19.46■□□□□ 0.71
PSMC3-211ENST00000531653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
PSMC3-211ENST00000531653 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
PSMC3-211ENST00000531653 SCAPERQ9BY12 1400 aa19.44■□□□□ 0.7
PSMC3-211ENST00000531653 PLCH2O75038 1416 aa19.42■□□□□ 0.7
PSMC3-211ENST00000531653 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
PSMC3-211ENST00000531653 C3P01024 1663 aa19.4■□□□□ 0.7
PSMC3-211ENST00000531653 KDM5CP41229 1560 aa19.38■□□□□ 0.69
PSMC3-211ENST00000531653 NCOA1Q15788 1441 aa19.37■□□□□ 0.69
PSMC3-211ENST00000531653 DIP2CQ9Y2E4 1556 aa19.34■□□□□ 0.69
PSMC3-211ENST00000531653 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
PSMC3-211ENST00000531653 MYO5CQ9NQX4 1742 aa19.32■□□□□ 0.68
PSMC3-211ENST00000531653 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
PSMC3-211ENST00000531653 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
PSMC3-211ENST00000531653 AGLP35573 1532 aa19.3■□□□□ 0.68
PSMC3-211ENST00000531653 ABCA6Q8N139 1617 aa19.27■□□□□ 0.68
PSMC3-211ENST00000531653 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.68
PSMC3-211ENST00000531653 MLH3Q9UHC1 1453 aa19.26■□□□□ 0.67
PSMC3-211ENST00000531653 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
PSMC3-211ENST00000531653 CAMSAP1Q5T5Y3 1602 aa19.24■□□□□ 0.67
PSMC3-211ENST00000531653 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
PSMC3-211ENST00000531653 NPATQ14207 1427 aa19.22■□□□□ 0.67
PSMC3-211ENST00000531653 MROH2AA6NES4 1674 aa19.21■□□□□ 0.67
PSMC3-211ENST00000531653 MED1Q15648 1581 aaPredicted RBP19.21■□□□□ 0.67
PSMC3-211ENST00000531653 CNTLNQ9NXG0 1405 aa19.21■□□□□ 0.67
PSMC3-211ENST00000531653 KIF14Q15058 1648 aa19.21■□□□□ 0.67
PSMC3-211ENST00000531653 ZNF335Q9H4Z2 1342 aaPredicted RBP19.2■□□□□ 0.66
PSMC3-211ENST00000531653 UBAP1LF5GYI3 381 aa19.19■□□□□ 0.66
PSMC3-211ENST00000531653 PLA2R1Q13018 1463 aa19.18■□□□□ 0.66
PSMC3-211ENST00000531653 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
PSMC3-211ENST00000531653 TCOF1Q13428 1488 aaKnown RBP19.16■□□□□ 0.66
PSMC3-211ENST00000531653 CDC42BPBQ9Y5S2 1711 aa19.16■□□□□ 0.66
PSMC3-211ENST00000531653 KIDINS220Q9ULH0 1771 aa19.16■□□□□ 0.66
PSMC3-211ENST00000531653 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
PSMC3-211ENST00000531653 NCKAP5LQ9HCH0 1330 aa19.13■□□□□ 0.65
PSMC3-211ENST00000531653 ABCC1P33527 1531 aa19.13■□□□□ 0.65
PSMC3-211ENST00000531653 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
PSMC3-211ENST00000531653 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
PSMC3-211ENST00000531653 RANGAP1P46060 587 aaPredicted RBP19.11■□□□□ 0.65
PSMC3-211ENST00000531653 PKD2Q13563 968 aa19.1■□□□□ 0.65
PSMC3-211ENST00000531653 MYO3AQ8NEV4 1616 aa19.1■□□□□ 0.65
PSMC3-211ENST00000531653 ESF1Q9H501 851 aaKnown RBP19.09■□□□□ 0.65
PSMC3-211ENST00000531653 EEA1Q15075 1411 aa19.08■□□□□ 0.65
PSMC3-211ENST00000531653 ZMYM3Q14202 1370 aa19.08■□□□□ 0.65
PSMC3-211ENST00000531653 PREX2Q70Z35 1606 aa19.08■□□□□ 0.65
PSMC3-211ENST00000531653 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.65
PSMC3-211ENST00000531653 HSPA1LP34931 641 aa19.08■□□□□ 0.64
PSMC3-211ENST00000531653 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
PSMC3-211ENST00000531653 CDK11AQ9UQ88 783 aaPredicted RBP19.06■□□□□ 0.64
PSMC3-211ENST00000531653 FMN1Q68DA7 1419 aa19.06■□□□□ 0.64
PSMC3-211ENST00000531653 LRRIQ1Q96JM4 1722 aa19.05■□□□□ 0.64
PSMC3-211ENST00000531653 PTPRKQ15262 1439 aa19.04■□□□□ 0.64
PSMC3-211ENST00000531653 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
PSMC3-211ENST00000531653 CLIP1P30622 1438 aa19.02■□□□□ 0.64
PSMC3-211ENST00000531653 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
PSMC3-211ENST00000531653 PLXNC1O60486 1568 aa19.02■□□□□ 0.63
PSMC3-211ENST00000531653 CLTCQ00610 1675 aaKnown RBP19.01■□□□□ 0.63
PSMC3-211ENST00000531653 CPS1P31327 1500 aa19.01■□□□□ 0.63
PSMC3-211ENST00000531653 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
PSMC3-211ENST00000531653 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
PSMC3-211ENST00000531653 ARHGAP35Q9NRY4 1499 aa18.99■□□□□ 0.63
PSMC3-211ENST00000531653 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
PSMC3-211ENST00000531653 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
PSMC3-211ENST00000531653 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
PSMC3-211ENST00000531653 TOM1O60784 492 aa18.96■□□□□ 0.63
PSMC3-211ENST00000531653 POLR1AO95602 1720 aaPredicted RBP18.96■□□□□ 0.63
PSMC3-211ENST00000531653 A2ML1A8K2U0 1454 aa18.96■□□□□ 0.63
PSMC3-211ENST00000531653 SHANK2Q9UPX8 1470 aa18.95■□□□□ 0.62
PSMC3-211ENST00000531653 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
PSMC3-211ENST00000531653 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
PSMC3-211ENST00000531653 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
PSMC3-211ENST00000531653 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
PSMC3-211ENST00000531653 ATP1B4Q9UN42 357 aaPredicted RBP18.9■□□□□ 0.62
PSMC3-211ENST00000531653 SCAF1Q9H7N4 1312 aaKnown RBP18.89■□□□□ 0.61
PSMC3-211ENST00000531653 A2MP01023 1474 aa18.89■□□□□ 0.61
PSMC3-211ENST00000531653 SYCP2Q9BX26 1530 aa18.89■□□□□ 0.61
PSMC3-211ENST00000531653 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
PSMC3-211ENST00000531653 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
PSMC3-211ENST00000531653 RGS17Q9UGC6 210 aaPredicted RBP18.85■□□□□ 0.61
PSMC3-211ENST00000531653 MED14O60244 1454 aa18.84■□□□□ 0.61
PSMC3-211ENST00000531653 CCDC18Q5T9S5 1454 aa18.84■□□□□ 0.61
PSMC3-211ENST00000531653 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
PSMC3-211ENST00000531653 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.6
PSMC3-211ENST00000531653 ADGBQ8N7X0 1667 aa18.82■□□□□ 0.6
PSMC3-211ENST00000531653 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
PSMC3-211ENST00000531653 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
PSMC3-211ENST00000531653 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
PSMC3-211ENST00000531653 GGT6Q6P531 493 aa18.79■□□□□ 0.6
PSMC3-211ENST00000531653 RNF17Q9BXT8 1623 aaKnown RBP18.78■□□□□ 0.6
PSMC3-211ENST00000531653 PLEKHH2Q8IVE3 1493 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms