RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 PREX1Q8TCU6 1659 aa33.36■■■□□ 2.93
HIPK3-205ENST00000531504 SCAPERQ9BY12 1400 aa33.35■■■□□ 2.93
HIPK3-205ENST00000531504 ARHGEF12Q9NZN5 1544 aa33.33■■■□□ 2.93
HIPK3-205ENST00000531504 PLCH2O75038 1416 aa33.32■■■□□ 2.92
HIPK3-205ENST00000531504 CDK13Q14004 1512 aaKnown RBP33.31■■■□□ 2.92
HIPK3-205ENST00000531504 ATP10AO60312 1499 aa33.31■■■□□ 2.92
HIPK3-205ENST00000531504 C9orf84Q5VXU9 1444 aa33.3■■■□□ 2.92
HIPK3-205ENST00000531504 MYO5CQ9NQX4 1742 aa33.27■■■□□ 2.92
HIPK3-205ENST00000531504 DMRT2Q9Y5R5 561 aa33.21■■■□□ 2.91
HIPK3-205ENST00000531504 EFCAB2Q5VUJ9 269 aa33.2■■■□□ 2.91
HIPK3-205ENST00000531504 ZNF518AQ6AHZ1 1483 aa33.18■■■□□ 2.9
HIPK3-205ENST00000531504 UHRF1BP1Q6BDS2 1440 aa33.15■■■□□ 2.9
HIPK3-205ENST00000531504 STRCQ7RTU9 1775 aa33.15■■■□□ 2.9
HIPK3-205ENST00000531504 CDK11AQ9UQ88 783 aaPredicted RBP33.13■■■□□ 2.89
HIPK3-205ENST00000531504 KIF14Q15058 1648 aa33.13■■■□□ 2.89
HIPK3-205ENST00000531504 SETD1BQ9UPS6 1966 aaKnown RBP33.12■■■□□ 2.89
HIPK3-205ENST00000531504 DISP3Q9P2K9 1392 aa33.12■■■□□ 2.89
HIPK3-205ENST00000531504 CEBPAP49715 358 aaPredicted RBP33.12■■■□□ 2.89
HIPK3-205ENST00000531504 FMN1Q68DA7 1419 aa33.11■■■□□ 2.89
HIPK3-205ENST00000531504 KDM5CP41229 1560 aa33.11■■■□□ 2.89
HIPK3-205ENST00000531504 ARHGAP5Q13017 1502 aa33.08■■■□□ 2.89
HIPK3-205ENST00000531504 ATP1B4Q9UN42 357 aaPredicted RBP33.08■■■□□ 2.89
HIPK3-205ENST00000531504 REREQ9P2R6 1566 aa33.06■■■□□ 2.88
HIPK3-205ENST00000531504 DIP2CQ9Y2E4 1556 aa33.04■■■□□ 2.88
HIPK3-205ENST00000531504 MYT1LQ9UL68 1186 aa33.03■■■□□ 2.88
HIPK3-205ENST00000531504 CLIP1P30622 1438 aa33.02■■■□□ 2.88
HIPK3-205ENST00000531504 TROQ12816 1431 aaPredicted RBP33.01■■■□□ 2.87
HIPK3-205ENST00000531504 C3P01024 1663 aa33■■■□□ 2.87
HIPK3-205ENST00000531504 SOCS7O14512 581 aa32.99■■■□□ 2.87
HIPK3-205ENST00000531504 AFAP1Q8N556 730 aa32.99■■■□□ 2.87
HIPK3-205ENST00000531504 PTPRTO14522 1441 aa32.99■■■□□ 2.87
HIPK3-205ENST00000531504 ILDR2Q71H61 639 aa32.97■■■□□ 2.87
HIPK3-205ENST00000531504 ABCA6Q8N139 1617 aa32.97■■■□□ 2.87
HIPK3-205ENST00000531504 ESF1Q9H501 851 aaKnown RBP32.95■■■□□ 2.87
HIPK3-205ENST00000531504 SPATA31D1Q6ZQQ2 1576 aa32.95■■■□□ 2.86
HIPK3-205ENST00000531504 MLH3Q9UHC1 1453 aa32.94■■■□□ 2.86
HIPK3-205ENST00000531504 ARHGAP35Q9NRY4 1499 aa32.93■■■□□ 2.86
HIPK3-205ENST00000531504 AGLP35573 1532 aa32.92■■■□□ 2.86
HIPK3-205ENST00000531504 CDC42BPBQ9Y5S2 1711 aa32.91■■■□□ 2.86
HIPK3-205ENST00000531504 UBTFP17480 764 aaKnown RBP32.91■■■□□ 2.86
HIPK3-205ENST00000531504 TRAPPC8Q9Y2L5 1435 aa32.88■■■□□ 2.85
HIPK3-205ENST00000531504 PREX2Q70Z35 1606 aa32.88■■■□□ 2.85
HIPK3-205ENST00000531504 IQSEC2Q5JU85 1478 aa32.87■■■□□ 2.85
HIPK3-205ENST00000531504 ABCC1P33527 1531 aa32.87■■■□□ 2.85
HIPK3-205ENST00000531504 LRRIQ1Q96JM4 1722 aa32.86■■■□□ 2.85
HIPK3-205ENST00000531504 CNTLNQ9NXG0 1405 aa32.85■■■□□ 2.85
HIPK3-205ENST00000531504 ITSN2Q9NZM3 1697 aa32.85■■■□□ 2.85
HIPK3-205ENST00000531504 LTBP4Q8N2S1 1624 aa32.84■■■□□ 2.85
HIPK3-205ENST00000531504 NCOA1Q15788 1441 aa32.81■■■□□ 2.84
HIPK3-205ENST00000531504 EHMT2Q96KQ7 1210 aa32.79■■■□□ 2.84
HIPK3-205ENST00000531504 KIDINS220Q9ULH0 1771 aa32.78■■■□□ 2.84
HIPK3-205ENST00000531504 MROH2AA6NES4 1674 aa32.76■■■□□ 2.84
HIPK3-205ENST00000531504 CCDC18Q5T9S5 1454 aa32.74■■■□□ 2.83
HIPK3-205ENST00000531504 NPATQ14207 1427 aa32.74■■■□□ 2.83
HIPK3-205ENST00000531504 CAMSAP1Q5T5Y3 1602 aa32.72■■■□□ 2.83
HIPK3-205ENST00000531504 CDC42BPAQ5VT25 1732 aa32.71■■■□□ 2.83
HIPK3-205ENST00000531504 CASKIN1Q8WXD9 1431 aa32.65■■■□□ 2.82
HIPK3-205ENST00000531504 SAMD9LQ8IVG5 1584 aa32.65■■■□□ 2.82
HIPK3-205ENST00000531504 ZMYM3Q14202 1370 aa32.6■■■□□ 2.81
HIPK3-205ENST00000531504 ZNF142P52746 1687 aaPredicted RBP32.6■■■□□ 2.81
HIPK3-205ENST00000531504 SUPT6HQ7KZ85 1726 aaKnown RBP32.6■■■□□ 2.81
HIPK3-205ENST00000531504 MYO3AQ8NEV4 1616 aa32.58■■■□□ 2.81
HIPK3-205ENST00000531504 SYCP2Q9BX26 1530 aa32.57■■■□□ 2.8
HIPK3-205ENST00000531504 CLTCQ00610 1675 aaKnown RBP32.56■■■□□ 2.8
HIPK3-205ENST00000531504 PLA2R1Q13018 1463 aa32.56■■■□□ 2.8
HIPK3-205ENST00000531504 SPAG9O60271 1321 aaKnown RBP32.55■■■□□ 2.8
HIPK3-205ENST00000531504 ZNF777Q9ULD5 760 aaPredicted RBP32.54■■■□□ 2.8
HIPK3-205ENST00000531504 ZNF335Q9H4Z2 1342 aaPredicted RBP32.53■■■□□ 2.8
HIPK3-205ENST00000531504 NCKAP5LQ9HCH0 1330 aa32.53■■■□□ 2.8
HIPK3-205ENST00000531504 ATP7AQ04656 1500 aa32.53■■■□□ 2.8
HIPK3-205ENST00000531504 UBAP1LF5GYI3 381 aa32.53■■■□□ 2.8
HIPK3-205ENST00000531504 PKD2Q13563 968 aa32.53■■■□□ 2.8
HIPK3-205ENST00000531504 CEP170BQ9Y4F5 1589 aaPredicted RBP32.52■■■□□ 2.8
HIPK3-205ENST00000531504 PLXNC1O60486 1568 aa32.51■■■□□ 2.79
HIPK3-205ENST00000531504 FYCO1Q9BQS8 1478 aa32.51■■■□□ 2.79
HIPK3-205ENST00000531504 INO80Q9ULG1 1556 aaPredicted RBP32.49■■■□□ 2.79
HIPK3-205ENST00000531504 PLEKHH2Q8IVE3 1493 aa32.48■■■□□ 2.79
HIPK3-205ENST00000531504 TCOF1Q13428 1488 aaKnown RBP32.48■■■□□ 2.79
HIPK3-205ENST00000531504 A2MP01023 1474 aa32.47■■■□□ 2.79
HIPK3-205ENST00000531504 GPATCH8Q9UKJ3 1502 aaKnown RBP32.46■■■□□ 2.79
HIPK3-205ENST00000531504 PTPRKQ15262 1439 aa32.45■■■□□ 2.79
HIPK3-205ENST00000531504 KIAA1107Q9UPP5 1409 aa32.45■■■□□ 2.79
HIPK3-205ENST00000531504 HNRNPMP52272 730 aaKnown RBP eCLIP32.44■■■□□ 2.789e-6■■■■□ 22.2
HIPK3-205ENST00000531504 ADGBQ8N7X0 1667 aa32.4■■■□□ 2.78
HIPK3-205ENST00000531504 PPP6R1Q9UPN7 881 aa32.39■■■□□ 2.78
HIPK3-205ENST00000531504 GGT6Q6P531 493 aa32.38■■■□□ 2.77
HIPK3-205ENST00000531504 CFDP1Q9UEE9 299 aaPredicted RBP32.37■■■□□ 2.77
HIPK3-205ENST00000531504 A2ML1A8K2U0 1454 aa32.34■■■□□ 2.77
HIPK3-205ENST00000531504 CCNB3Q8WWL7 1395 aa32.33■■■□□ 2.77
HIPK3-205ENST00000531504 DNMT1P26358 1616 aaKnown RBP32.31■■■□□ 2.76
HIPK3-205ENST00000531504 POLR1AO95602 1720 aaPredicted RBP32.3■■■□□ 2.76
HIPK3-205ENST00000531504 CPS1P31327 1500 aa32.27■■■□□ 2.76
HIPK3-205ENST00000531504 CHIC1Q5VXU3 224 aa32.26■■■□□ 2.75
HIPK3-205ENST00000531504 SCAF1Q9H7N4 1312 aaKnown RBP32.25■■■□□ 2.75
HIPK3-205ENST00000531504 MED1Q15648 1581 aaPredicted RBP32.24■■■□□ 2.75
HIPK3-205ENST00000531504 MTUS2Q5JR59 1369 aa32.23■■■□□ 2.75
HIPK3-205ENST00000531504 TOM1O60784 492 aa32.22■■■□□ 2.75
HIPK3-205ENST00000531504 NEURL4Q96JN8 1562 aa32.19■■■□□ 2.74
HIPK3-205ENST00000531504 HSPA1LP34931 641 aa32.19■■■□□ 2.74
HIPK3-205ENST00000531504 RTEL1-TNFRSF6BF6WH68 1400 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms