RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 MYT1LQ9UL68 1186 aa21.95■■□□□ 1.1
SSH3-207ENST00000531495 ZMYM4Q5VZL5 1548 aa21.95■■□□□ 1.1
SSH3-207ENST00000531495 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
SSH3-207ENST00000531495 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
SSH3-207ENST00000531495 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
SSH3-207ENST00000531495 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
SSH3-207ENST00000531495 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
SSH3-207ENST00000531495 ATP10AO60312 1499 aa21.91■■□□□ 1.1
SSH3-207ENST00000531495 HECW1Q76N89 1606 aa21.89■■□□□ 1.09
SSH3-207ENST00000531495 DMRT2Q9Y5R5 561 aa21.89■■□□□ 1.09
SSH3-207ENST00000531495 C9orf84Q5VXU9 1444 aa21.86■■□□□ 1.09
SSH3-207ENST00000531495 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
SSH3-207ENST00000531495 AFAP1Q8N556 730 aa21.85■■□□□ 1.09
SSH3-207ENST00000531495 ESF1Q9H501 851 aaKnown RBP21.84■■□□□ 1.09
SSH3-207ENST00000531495 CLIP1P30622 1438 aa21.82■■□□□ 1.08
SSH3-207ENST00000531495 ZNF518AQ6AHZ1 1483 aa21.81■■□□□ 1.08
SSH3-207ENST00000531495 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
SSH3-207ENST00000531495 ARHGEF12Q9NZN5 1544 aa21.78■■□□□ 1.08
SSH3-207ENST00000531495 FER1L4A9Z1Z3 1794 aa21.78■■□□□ 1.08
SSH3-207ENST00000531495 ARHGAP5Q13017 1502 aa21.77■■□□□ 1.08
SSH3-207ENST00000531495 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.07
SSH3-207ENST00000531495 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
SSH3-207ENST00000531495 UHRF1BP1Q6BDS2 1440 aa21.75■■□□□ 1.07
SSH3-207ENST00000531495 MYO5CQ9NQX4 1742 aa21.74■■□□□ 1.07
SSH3-207ENST00000531495 KIF14Q15058 1648 aa21.73■■□□□ 1.07
SSH3-207ENST00000531495 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
SSH3-207ENST00000531495 PREX1Q8TCU6 1659 aa21.67■■□□□ 1.06
SSH3-207ENST00000531495 MLH3Q9UHC1 1453 aa21.67■■□□□ 1.06
SSH3-207ENST00000531495 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
SSH3-207ENST00000531495 KDM5CP41229 1560 aa21.65■■□□□ 1.06
SSH3-207ENST00000531495 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
SSH3-207ENST00000531495 ZNF777Q9ULD5 760 aaPredicted RBP21.63■■□□□ 1.05
SSH3-207ENST00000531495 PTPRTO14522 1441 aa21.62■■□□□ 1.05
SSH3-207ENST00000531495 CCDC18Q5T9S5 1454 aa21.61■■□□□ 1.05
SSH3-207ENST00000531495 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
SSH3-207ENST00000531495 DISP3Q9P2K9 1392 aa21.61■■□□□ 1.05
SSH3-207ENST00000531495 CASKIN1Q8WXD9 1431 aa21.6■■□□□ 1.05
SSH3-207ENST00000531495 CNTLNQ9NXG0 1405 aa21.6■■□□□ 1.05
SSH3-207ENST00000531495 DIP2CQ9Y2E4 1556 aa21.6■■□□□ 1.05
SSH3-207ENST00000531495 AGLP35573 1532 aa21.6■■□□□ 1.05
SSH3-207ENST00000531495 SPAG9O60271 1321 aaKnown RBP21.56■■□□□ 1.04
SSH3-207ENST00000531495 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.04
SSH3-207ENST00000531495 CDC42BPBQ9Y5S2 1711 aa21.54■■□□□ 1.04
SSH3-207ENST00000531495 STRCQ7RTU9 1775 aa21.53■■□□□ 1.04
SSH3-207ENST00000531495 ABCC1P33527 1531 aa21.53■■□□□ 1.04
SSH3-207ENST00000531495 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
SSH3-207ENST00000531495 ABCA6Q8N139 1617 aa21.52■■□□□ 1.04
SSH3-207ENST00000531495 CFDP1Q9UEE9 299 aaPredicted RBP21.52■■□□□ 1.04
SSH3-207ENST00000531495 PREX2Q70Z35 1606 aa21.51■■□□□ 1.03
SSH3-207ENST00000531495 NPATQ14207 1427 aa21.49■■□□□ 1.03
SSH3-207ENST00000531495 C3P01024 1663 aa21.49■■□□□ 1.03
SSH3-207ENST00000531495 SOCS7O14512 581 aa21.48■■□□□ 1.03
SSH3-207ENST00000531495 NCOA1Q15788 1441 aa21.47■■□□□ 1.03
SSH3-207ENST00000531495 GGT6Q6P531 493 aa21.47■■□□□ 1.03
SSH3-207ENST00000531495 ILDR2Q71H61 639 aa21.47■■□□□ 1.03
SSH3-207ENST00000531495 PPP6R1Q9UPN7 881 aa21.46■■□□□ 1.03
SSH3-207ENST00000531495 LRRIQ1Q96JM4 1722 aa21.46■■□□□ 1.03
SSH3-207ENST00000531495 FYCO1Q9BQS8 1478 aa21.45■■□□□ 1.03
SSH3-207ENST00000531495 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
SSH3-207ENST00000531495 PKD2Q13563 968 aa21.45■■□□□ 1.02
SSH3-207ENST00000531495 CCNB3Q8WWL7 1395 aa21.45■■□□□ 1.02
SSH3-207ENST00000531495 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.02
SSH3-207ENST00000531495 GPATCH8Q9UKJ3 1502 aaKnown RBP21.45■■□□□ 1.02
SSH3-207ENST00000531495 KIDINS220Q9ULH0 1771 aa21.44■■□□□ 1.02
SSH3-207ENST00000531495 NCKAP5LQ9HCH0 1330 aa21.44■■□□□ 1.02
SSH3-207ENST00000531495 KIAA1107Q9UPP5 1409 aa21.44■■□□□ 1.02
SSH3-207ENST00000531495 IQSEC2Q5JU85 1478 aa21.43■■□□□ 1.02
SSH3-207ENST00000531495 SAMD9LQ8IVG5 1584 aa21.43■■□□□ 1.02
SSH3-207ENST00000531495 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
SSH3-207ENST00000531495 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
SSH3-207ENST00000531495 CAMSAP1Q5T5Y3 1602 aa21.4■■□□□ 1.02
SSH3-207ENST00000531495 LTBP4Q8N2S1 1624 aa21.4■■□□□ 1.02
SSH3-207ENST00000531495 CDC42BPAQ5VT25 1732 aa21.39■■□□□ 1.01
SSH3-207ENST00000531495 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
SSH3-207ENST00000531495 A2MP01023 1474 aa21.39■■□□□ 1.01
SSH3-207ENST00000531495 ZNF335Q9H4Z2 1342 aaPredicted RBP21.36■■□□□ 1.01
SSH3-207ENST00000531495 ATP7AQ04656 1500 aa21.35■■□□□ 1.01
SSH3-207ENST00000531495 MROH2AA6NES4 1674 aa21.35■■□□□ 1.01
SSH3-207ENST00000531495 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
SSH3-207ENST00000531495 PTPRKQ15262 1439 aa21.32■■□□□ 1
SSH3-207ENST00000531495 PLA2R1Q13018 1463 aa21.32■■□□□ 1
SSH3-207ENST00000531495 ZNF644Q9H582 1327 aaPredicted RBP21.29■■□□□ 1
SSH3-207ENST00000531495 RSPH4AQ5TD94 716 aa21.29■■□□□ 1
SSH3-207ENST00000531495 SPATA31D1Q6ZQQ2 1576 aa21.28■■□□□ 1
SSH3-207ENST00000531495 DHX29Q7Z478 1369 aaKnown RBP21.27■■□□□ 1
SSH3-207ENST00000531495 KIF3BO15066 747 aa21.27■■□□□ 1
SSH3-207ENST00000531495 RTEL1-TNFRSF6BF6WH68 1400 aa21.27■■□□□ 1
SSH3-207ENST00000531495 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
SSH3-207ENST00000531495 PLXNC1O60486 1568 aa21.25■□□□□ 0.99
SSH3-207ENST00000531495 TCOF1Q13428 1488 aaKnown RBP21.25■□□□□ 0.99
SSH3-207ENST00000531495 INO80Q9ULG1 1556 aaPredicted RBP21.24■□□□□ 0.99
SSH3-207ENST00000531495 CEP170BQ9Y4F5 1589 aaPredicted RBP21.24■□□□□ 0.99
SSH3-207ENST00000531495 TOM1O60784 492 aa21.24■□□□□ 0.99
SSH3-207ENST00000531495 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
SSH3-207ENST00000531495 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
SSH3-207ENST00000531495 ANKLE2Q86XL3 938 aa21.23■□□□□ 0.99
SSH3-207ENST00000531495 A2ML1A8K2U0 1454 aa21.22■□□□□ 0.99
SSH3-207ENST00000531495 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
SSH3-207ENST00000531495 MBD5Q9P267 1494 aa21.21■□□□□ 0.99
SSH3-207ENST00000531495 TSPY4P0CV99 314 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms