RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 PLB1Q6P1J6 1458 aa24.42■■□□□ 1.5
BRCA2-204ENST00000530893 TRIM52Q96A61 297 aa24.41■■□□□ 1.5
BRCA2-204ENST00000530893 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
BRCA2-204ENST00000530893 MPHOSPH9Q99550 1183 aa24.39■■□□□ 1.5
BRCA2-204ENST00000530893 PRG4Q92954 1404 aaPredicted RBP24.38■■□□□ 1.49
BRCA2-204ENST00000530893 FBLN2P98095 1184 aa24.37■■□□□ 1.49
BRCA2-204ENST00000530893 CAMSAP2Q08AD1 1489 aa24.36■■□□□ 1.49
BRCA2-204ENST00000530893 GPATCH8Q9UKJ3 1502 aaKnown RBP24.35■■□□□ 1.49
BRCA2-204ENST00000530893 ABCA8O94911 1581 aa24.35■■□□□ 1.49
BRCA2-204ENST00000530893 ADGBQ8N7X0 1667 aa24.35■■□□□ 1.49
BRCA2-204ENST00000530893 CCER2I3L3R5 266 aa24.32■■□□□ 1.48
BRCA2-204ENST00000530893 CFDP1Q9UEE9 299 aaPredicted RBP24.32■■□□□ 1.48
BRCA2-204ENST00000530893 KIF14Q15058 1648 aa24.32■■□□□ 1.48
BRCA2-204ENST00000530893 ZNF644Q9H582 1327 aaPredicted RBP24.31■■□□□ 1.48
BRCA2-204ENST00000530893 CROCC2H7BZ55 1655 aa24.31■■□□□ 1.48
BRCA2-204ENST00000530893 ADGRL2O95490 1459 aa24.31■■□□□ 1.48
BRCA2-204ENST00000530893 ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
BRCA2-204ENST00000530893 RPRD2Q5VT52 1461 aaKnown RBP24.28■■□□□ 1.48
BRCA2-204ENST00000530893 ANP32CO43423 234 aa24.28■■□□□ 1.48
BRCA2-204ENST00000530893 HIRIP3Q9BW71 556 aaPredicted RBP24.27■■□□□ 1.48
BRCA2-204ENST00000530893 NCOA1Q15788 1441 aa24.27■■□□□ 1.48
BRCA2-204ENST00000530893 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
BRCA2-204ENST00000530893 ATP10BO94823 1461 aa24.22■■□□□ 1.47
BRCA2-204ENST00000530893 CDC42BPAQ5VT25 1732 aa24.22■■□□□ 1.47
BRCA2-204ENST00000530893 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
BRCA2-204ENST00000530893 ABCC10Q5T3U5 1492 aa24.22■■□□□ 1.47
BRCA2-204ENST00000530893 SHANK2Q9UPX8 1470 aa24.21■■□□□ 1.47
BRCA2-204ENST00000530893 ANKRD30AQ9BXX3 1397 aa24.2■■□□□ 1.46
BRCA2-204ENST00000530893 SLC4A1APQ9BWU0 796 aaKnown RBP24.19■■□□□ 1.46
BRCA2-204ENST00000530893 L3MBTL2Q969R5 705 aa24.18■■□□□ 1.46
BRCA2-204ENST00000530893 TEX14Q8IWB6 1497 aa24.18■■□□□ 1.46
BRCA2-204ENST00000530893 EIF4G2P78344 907 aaKnown RBP eCLIP24.18■■□□□ 1.46
BRCA2-204ENST00000530893 PZPP20742 1482 aa24.18■■□□□ 1.46
BRCA2-204ENST00000530893 HSPA5P11021 654 aaKnown RBP24.15■■□□□ 1.46
BRCA2-204ENST00000530893 PTPRGP23470 1445 aa24.13■■□□□ 1.45
BRCA2-204ENST00000530893 FOXD1Q16676 465 aa24.13■■□□□ 1.45
BRCA2-204ENST00000530893 ZNF777Q9ULD5 760 aaPredicted RBP24.13■■□□□ 1.45
BRCA2-204ENST00000530893 KIAA1107Q9UPP5 1409 aa24.11■■□□□ 1.45
BRCA2-204ENST00000530893 ANKRD50Q9ULJ7 1429 aa24.1■■□□□ 1.45
BRCA2-204ENST00000530893 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
BRCA2-204ENST00000530893 SUPT16HQ9Y5B9 1047 aaKnown RBP24.1■■□□□ 1.45
BRCA2-204ENST00000530893 WASHC2AQ641Q2 1341 aa24.09■■□□□ 1.45
BRCA2-204ENST00000530893 CHD1O14646 1710 aa24.08■■□□□ 1.45
BRCA2-204ENST00000530893 SHROOM2Q13796 1616 aa24.08■■□□□ 1.45
BRCA2-204ENST00000530893 C9orf84Q5VXU9 1444 aa24.08■■□□□ 1.44
BRCA2-204ENST00000530893 KDM5DQ9BY66 1539 aa24.05■■□□□ 1.44
BRCA2-204ENST00000530893 POLR1AO95602 1720 aaPredicted RBP24.03■■□□□ 1.44
BRCA2-204ENST00000530893 PREX2Q70Z35 1606 aa24.03■■□□□ 1.44
BRCA2-204ENST00000530893 TSPY4P0CV99 314 aa24.02■■□□□ 1.44
BRCA2-204ENST00000530893 TSPY10P0CW01 314 aa24.02■■□□□ 1.44
BRCA2-204ENST00000530893 MBD5Q9P267 1494 aa24.02■■□□□ 1.44
BRCA2-204ENST00000530893 CNTLNQ9NXG0 1405 aa24.02■■□□□ 1.44
BRCA2-204ENST00000530893 SPATA31E1Q6ZUB1 1445 aa24.01■■□□□ 1.43
BRCA2-204ENST00000530893 NBPF8Q3BBV2 869 aa24.01■■□□□ 1.43
BRCA2-204ENST00000530893 RSPH4AQ5TD94 716 aa24■■□□□ 1.43
BRCA2-204ENST00000530893 CDC42BPBQ9Y5S2 1711 aa23.99■■□□□ 1.43
BRCA2-204ENST00000530893 CCDC7Q96M83 1385 aa23.98■■□□□ 1.43
BRCA2-204ENST00000530893 PKD2Q13563 968 aa23.97■■□□□ 1.43
BRCA2-204ENST00000530893 CCDC141Q6ZP82 1450 aa23.97■■□□□ 1.43
BRCA2-204ENST00000530893 SAMD9LQ8IVG5 1584 aa23.96■■□□□ 1.43
BRCA2-204ENST00000530893 NUP155O75694 1391 aa23.94■■□□□ 1.42
BRCA2-204ENST00000530893 KIF15Q9NS87 1388 aa23.94■■□□□ 1.42
BRCA2-204ENST00000530893 ABCC2Q92887 1545 aa23.92■■□□□ 1.42
BRCA2-204ENST00000530893 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
BRCA2-204ENST00000530893 MAST1Q9Y2H9 1570 aa23.9■■□□□ 1.42
BRCA2-204ENST00000530893 UHRF1BP1Q6BDS2 1440 aa23.9■■□□□ 1.42
BRCA2-204ENST00000530893 HNRNPMP52272 730 aaKnown RBP eCLIP23.89■■□□□ 1.41
BRCA2-204ENST00000530893 C11orf95C9JLR9 678 aaPredicted RBP23.87■■□□□ 1.41
BRCA2-204ENST00000530893 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
BRCA2-204ENST00000530893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.86■■□□□ 1.41
BRCA2-204ENST00000530893 TTC37Q6PGP7 1564 aa23.85■■□□□ 1.41
BRCA2-204ENST00000530893 MYO5CQ9NQX4 1742 aa23.85■■□□□ 1.41
BRCA2-204ENST00000530893 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
BRCA2-204ENST00000530893 ARID4BQ4LE39 1312 aaPredicted RBP23.84■■□□□ 1.41
BRCA2-204ENST00000530893 ARHGAP5Q13017 1502 aa23.84■■□□□ 1.41
BRCA2-204ENST00000530893 RALGAPBQ86X10 1494 aa23.83■■□□□ 1.4
BRCA2-204ENST00000530893 SYCP2Q9BX26 1530 aa23.82■■□□□ 1.4
BRCA2-204ENST00000530893 PRKRIP1Q9H875 184 aaPredicted RBP23.82■■□□□ 1.4
BRCA2-204ENST00000530893 KDM5CP41229 1560 aa23.82■■□□□ 1.4
BRCA2-204ENST00000530893 USP47Q96K76 1375 aa23.81■■□□□ 1.4
BRCA2-204ENST00000530893 PLXNC1O60486 1568 aa23.81■■□□□ 1.4
BRCA2-204ENST00000530893 FAM135AQ9P2D6 1515 aa23.8■■□□□ 1.4
BRCA2-204ENST00000530893 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
BRCA2-204ENST00000530893 UHRF1BP1LA0JNW5 1464 aa23.79■■□□□ 1.4
BRCA2-204ENST00000530893 NEFLP07196 543 aa23.79■■□□□ 1.4
BRCA2-204ENST00000530893 UNC13BO14795 1591 aa23.79■■□□□ 1.4
BRCA2-204ENST00000530893 ERCC6L2Q5T890 1561 aa23.79■■□□□ 1.4
BRCA2-204ENST00000530893 FKBP8Q14318 412 aa23.76■■□□□ 1.39
BRCA2-204ENST00000530893 HNRNPUQ00839 825 aaKnown RBP eCLIP23.75■■□□□ 1.39
BRCA2-204ENST00000530893 BCORL1Q5H9F3 1711 aa23.73■■□□□ 1.39
BRCA2-204ENST00000530893 ZCCHC11Q5TAX3 1644 aaKnown RBP23.73■■□□□ 1.39
BRCA2-204ENST00000530893 ROCK2O75116 1388 aaKnown RBP23.72■■□□□ 1.39
BRCA2-204ENST00000530893 PLCH2O75038 1416 aa23.71■■□□□ 1.39
BRCA2-204ENST00000530893 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
BRCA2-204ENST00000530893 IQGAP3Q86VI3 1631 aa23.7■■□□□ 1.38
BRCA2-204ENST00000530893 ZNF326Q5BKZ1 582 aaKnown RBP23.7■■□□□ 1.38
BRCA2-204ENST00000530893 ERBINQ96RT1 1412 aa23.68■■□□□ 1.38
BRCA2-204ENST00000530893 CCDC144AA2RUR9 1427 aa23.67■■□□□ 1.38
BRCA2-204ENST00000530893 MAGI2Q86UL8 1455 aa23.66■■□□□ 1.38
BRCA2-204ENST00000530893 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms