RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 ABCA5Q8WWZ7 1642 aa8.36□□□□□ -1.07
CTNND1-226ENST00000530720 GRIN2BQ13224 1484 aa8.35□□□□□ -1.07
CTNND1-226ENST00000530720 IER5LQ5T953 404 aa8.35□□□□□ -1.07
CTNND1-226ENST00000530720 DCAF8Q5TAQ9 597 aa8.35□□□□□ -1.07
CTNND1-226ENST00000530720 SYNJ2O15056 1496 aa8.34□□□□□ -1.07
CTNND1-226ENST00000530720 SEC24BO95487 1268 aa8.34□□□□□ -1.07
CTNND1-226ENST00000530720 COLQQ9Y215 455 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-226ENST00000530720 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
CTNND1-226ENST00000530720 ABCA10Q8WWZ4 1543 aa8.33□□□□□ -1.08
CTNND1-226ENST00000530720 POTEMA6NI47 508 aa8.32□□□□□ -1.08
CTNND1-226ENST00000530720 TMEM106CQ9BVX2 250 aa8.32□□□□□ -1.08
CTNND1-226ENST00000530720 GAPVD1Q14C86 1478 aa8.32□□□□□ -1.08
CTNND1-226ENST00000530720 PYGBP11216 843 aa8.31□□□□□ -1.08
CTNND1-226ENST00000530720 VASPP50552 380 aaPredicted RBP8.31□□□□□ -1.08
CTNND1-226ENST00000530720 POTEGQ6S5H5 508 aa8.29□□□□□ -1.08
CTNND1-226ENST00000530720 KLHL34Q8N239 644 aa8.29□□□□□ -1.08
CTNND1-226ENST00000530720 ADAMTS12P58397 1594 aa8.29□□□□□ -1.08
CTNND1-226ENST00000530720 ERCC6L2Q5T890 1561 aa8.29□□□□□ -1.08
CTNND1-226ENST00000530720 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
CTNND1-226ENST00000530720 CHMP7Q8WUX9 453 aaPredicted RBP8.28□□□□□ -1.08
CTNND1-226ENST00000530720 CEP170Q5SW79 1584 aa8.27□□□□□ -1.09
CTNND1-226ENST00000530720 GRIN2AQ12879 1464 aa8.27□□□□□ -1.09
CTNND1-226ENST00000530720 TOP2BQ02880 1626 aa8.27□□□□□ -1.09
CTNND1-226ENST00000530720 GSE1Q14687 1217 aa8.26□□□□□ -1.09
CTNND1-226ENST00000530720 NUP160Q12769 1436 aa8.26□□□□□ -1.09
CTNND1-226ENST00000530720 SHROOM2Q13796 1616 aa8.25□□□□□ -1.09
CTNND1-226ENST00000530720 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-226ENST00000530720 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
CTNND1-226ENST00000530720 PCDHB8Q9UN66 801 aa8.25□□□□□ -1.09
CTNND1-226ENST00000530720 WRNQ14191 1432 aaPredicted RBP eCLIP8.24□□□□□ -1.09
CTNND1-226ENST00000530720 IRX5P78411 483 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-226ENST00000530720 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-226ENST00000530720 PLCG2P16885 1265 aa8.23□□□□□ -1.09
CTNND1-226ENST00000530720 ERICH3Q5RHP9 1530 aa8.21□□□□□ -1.1
CTNND1-226ENST00000530720 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
CTNND1-226ENST00000530720 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-226ENST00000530720 PCDH10Q9P2E7 1040 aa8.21□□□□□ -1.1
CTNND1-226ENST00000530720 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
CTNND1-226ENST00000530720 CHRM1P11229 460 aaPredicted RBP8.2□□□□□ -1.1
CTNND1-226ENST00000530720 OCEL1Q9H607 264 aa8.2□□□□□ -1.1
CTNND1-226ENST00000530720 RUSC2Q8N2Y8 1516 aa8.18□□□□□ -1.1
CTNND1-226ENST00000530720 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
CTNND1-226ENST00000530720 SLAIN1Q8ND83 568 aa8.17□□□□□ -1.1
CTNND1-226ENST00000530720 KIF13AQ9H1H9 1805 aa8.17□□□□□ -1.1
CTNND1-226ENST00000530720 SPOCK2Q92563 424 aa8.16□□□□□ -1.1
CTNND1-226ENST00000530720 PRG4Q92954 1404 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-226ENST00000530720 PSEN1P49768 467 aa8.12□□□□□ -1.11
CTNND1-226ENST00000530720 MKRN3Q13064 507 aaKnown RBP8.12□□□□□ -1.11
CTNND1-226ENST00000530720 ADCY10Q96PN6 1610 aa8.11□□□□□ -1.11
CTNND1-226ENST00000530720 GOLGA2Q08379 1002 aa8.11□□□□□ -1.11
CTNND1-226ENST00000530720 PDCD7Q8N8D1 485 aaKnown RBP8.11□□□□□ -1.11
CTNND1-226ENST00000530720 CIZ1Q9ULV3 898 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-226ENST00000530720 JPH4Q96JJ6 628 aa8.1□□□□□ -1.11
CTNND1-226ENST00000530720 MAPKBP1O60336 1514 aa8.09□□□□□ -1.11
CTNND1-226ENST00000530720 ST18O60284 1047 aa8.09□□□□□ -1.11
CTNND1-226ENST00000530720 PDAP1Q13442 181 aaKnown RBP8.09□□□□□ -1.11
CTNND1-226ENST00000530720 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.09□□□□□ -1.11
CTNND1-226ENST00000530720 DIP2BQ9P265 1576 aa8.09□□□□□ -1.11
CTNND1-226ENST00000530720 IGF1RP08069 1367 aa8.09□□□□□ -1.12
CTNND1-226ENST00000530720 CUL7Q14999 1698 aa8.08□□□□□ -1.12
CTNND1-226ENST00000530720 KIAA0586Q9BVV6 1533 aa8.08□□□□□ -1.12
CTNND1-226ENST00000530720 ABCC10Q5T3U5 1492 aa8.07□□□□□ -1.12
CTNND1-226ENST00000530720 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.07□□□□□ -1.122e-7■■□□□ 12.7
CTNND1-226ENST00000530720 L3MBTL3Q96JM7 780 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-226ENST00000530720 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
CTNND1-226ENST00000530720 ILDR1Q86SU0 546 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-226ENST00000530720 SNPHO15079 494 aa8.04□□□□□ -1.12
CTNND1-226ENST00000530720 CDAN1Q8IWY9 1227 aa8.04□□□□□ -1.12
CTNND1-226ENST00000530720 C3orf67Q6ZVT6 689 aa8.03□□□□□ -1.12
CTNND1-226ENST00000530720 TMEM121BQ9BXQ6 578 aaPredicted RBP8.02□□□□□ -1.13
CTNND1-226ENST00000530720 CABP2Q9NPB3 220 aa8.02□□□□□ -1.13
CTNND1-226ENST00000530720 PPRC1Q5VV67 1664 aaKnown RBP8.01□□□□□ -1.13
CTNND1-226ENST00000530720 DISP1Q96F81 1524 aa8□□□□□ -1.13
CTNND1-226ENST00000530720 FAM69CQ0P6D2 419 aa8□□□□□ -1.13
CTNND1-226ENST00000530720 IQGAP2Q13576 1575 aa8□□□□□ -1.13
CTNND1-226ENST00000530720 CARMIL1Q5VZK9 1371 aa7.99□□□□□ -1.13
CTNND1-226ENST00000530720 DPY19L2Q6NUT2 758 aa7.99□□□□□ -1.13
CTNND1-226ENST00000530720 KDM6BO15054 1643 aa7.99□□□□□ -1.13
CTNND1-226ENST00000530720 ABCC2Q92887 1545 aa7.98□□□□□ -1.13
CTNND1-226ENST00000530720 TSPOAP1O95153 1857 aa7.98□□□□□ -1.13
CTNND1-226ENST00000530720 PTPRGP23470 1445 aa7.98□□□□□ -1.13
CTNND1-226ENST00000530720 UHRF1BP1LA0JNW5 1464 aa7.98□□□□□ -1.13
CTNND1-226ENST00000530720 GLI2P10070 1586 aa7.97□□□□□ -1.13
CTNND1-226ENST00000530720 UGGT2Q9NYU1 1516 aa7.97□□□□□ -1.13
CTNND1-226ENST00000530720 TNIKQ9UKE5 1360 aa7.97□□□□□ -1.13
CTNND1-226ENST00000530720 ASXL2Q76L83 1435 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 KDM5BQ9UGL1 1544 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 KDM4FA0A1W2PPD8 638 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 BOLA1Q9Y3E2 137 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 KIAA0556O60303 1618 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 MAP3K4Q9Y6R4 1608 aa7.95□□□□□ -1.14
CTNND1-226ENST00000530720 MARVELD3Q96A59 401 aa7.94□□□□□ -1.14
CTNND1-226ENST00000530720 CARMIL2Q6F5E8 1435 aa7.94□□□□□ -1.14
CTNND1-226ENST00000530720 UACAQ9BZF9 1416 aa7.94□□□□□ -1.14
CTNND1-226ENST00000530720 COL17A1Q9UMD9 1497 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-226ENST00000530720 RAPGEF2Q9Y4G8 1499 aa7.94□□□□□ -1.14
CTNND1-226ENST00000530720 ZCCHC11Q5TAX3 1644 aaKnown RBP7.93□□□□□ -1.14
CTNND1-226ENST00000530720 G3V3G9 751 aa7.93□□□□□ -1.14
CTNND1-226ENST00000530720 EFCAB3Q8N7B9 438 aa7.93□□□□□ -1.14
CTNND1-226ENST00000530720 PLB1Q6P1J6 1458 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms