RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
TM9SF1-210ENST00000530563 ATP10AO60312 1499 aa18.07■□□□□ 0.48
TM9SF1-210ENST00000530563 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
TM9SF1-210ENST00000530563 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
TM9SF1-210ENST00000530563 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
TM9SF1-210ENST00000530563 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
TM9SF1-210ENST00000530563 EEA1Q15075 1411 aa18.04■□□□□ 0.48
TM9SF1-210ENST00000530563 C9orf84Q5VXU9 1444 aa18.02■□□□□ 0.48
TM9SF1-210ENST00000530563 STRCQ7RTU9 1775 aa18.02■□□□□ 0.47
TM9SF1-210ENST00000530563 PREX1Q8TCU6 1659 aa18.01■□□□□ 0.47
TM9SF1-210ENST00000530563 EFCAB2Q5VUJ9 269 aa18■□□□□ 0.47
TM9SF1-210ENST00000530563 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
TM9SF1-210ENST00000530563 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
TM9SF1-210ENST00000530563 DISP3Q9P2K9 1392 aa17.95■□□□□ 0.46
TM9SF1-210ENST00000530563 SOCS7O14512 581 aa17.95■□□□□ 0.46
TM9SF1-210ENST00000530563 KDM5CP41229 1560 aa17.95■□□□□ 0.46
TM9SF1-210ENST00000530563 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
TM9SF1-210ENST00000530563 UHRF1BP1Q6BDS2 1440 aa17.93■□□□□ 0.46
TM9SF1-210ENST00000530563 KIF14Q15058 1648 aa17.93■□□□□ 0.46
TM9SF1-210ENST00000530563 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
TM9SF1-210ENST00000530563 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
TM9SF1-210ENST00000530563 PTPRTO14522 1441 aa17.91■□□□□ 0.46
TM9SF1-210ENST00000530563 REREQ9P2R6 1566 aa17.91■□□□□ 0.46
TM9SF1-210ENST00000530563 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
TM9SF1-210ENST00000530563 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
TM9SF1-210ENST00000530563 FMN1Q68DA7 1419 aa17.89■□□□□ 0.46
TM9SF1-210ENST00000530563 ARHGAP35Q9NRY4 1499 aa17.88■□□□□ 0.45
TM9SF1-210ENST00000530563 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
TM9SF1-210ENST00000530563 LTBP4Q8N2S1 1624 aa17.88■□□□□ 0.45
TM9SF1-210ENST00000530563 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
TM9SF1-210ENST00000530563 ATP1B4Q9UN42 357 aaPredicted RBP17.87■□□□□ 0.45
TM9SF1-210ENST00000530563 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
TM9SF1-210ENST00000530563 AGLP35573 1532 aa17.86■□□□□ 0.45
TM9SF1-210ENST00000530563 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
TM9SF1-210ENST00000530563 C3P01024 1663 aa17.86■□□□□ 0.45
TM9SF1-210ENST00000530563 TRAPPC8Q9Y2L5 1435 aa17.85■□□□□ 0.45
TM9SF1-210ENST00000530563 CDC42BPBQ9Y5S2 1711 aa17.83■□□□□ 0.44
TM9SF1-210ENST00000530563 NCOA1Q15788 1441 aa17.81■□□□□ 0.44
TM9SF1-210ENST00000530563 LRRIQ1Q96JM4 1722 aa17.81■□□□□ 0.44
TM9SF1-210ENST00000530563 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
TM9SF1-210ENST00000530563 CLIP1P30622 1438 aa17.8■□□□□ 0.44
TM9SF1-210ENST00000530563 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
TM9SF1-210ENST00000530563 ABCC1P33527 1531 aa17.79■□□□□ 0.44
TM9SF1-210ENST00000530563 UBTFP17480 764 aaKnown RBP17.79■□□□□ 0.44
TM9SF1-210ENST00000530563 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
TM9SF1-210ENST00000530563 EHMT2Q96KQ7 1210 aa17.78■□□□□ 0.44
TM9SF1-210ENST00000530563 KIDINS220Q9ULH0 1771 aa17.77■□□□□ 0.44
TM9SF1-210ENST00000530563 CNTLNQ9NXG0 1405 aa17.76■□□□□ 0.43
TM9SF1-210ENST00000530563 PREX2Q70Z35 1606 aa17.76■□□□□ 0.43
TM9SF1-210ENST00000530563 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
TM9SF1-210ENST00000530563 NPATQ14207 1427 aa17.74■□□□□ 0.43
TM9SF1-210ENST00000530563 ESF1Q9H501 851 aaKnown RBP17.74■□□□□ 0.43
TM9SF1-210ENST00000530563 CAMSAP1Q5T5Y3 1602 aa17.72■□□□□ 0.43
TM9SF1-210ENST00000530563 ZMYM3Q14202 1370 aa17.72■□□□□ 0.43
TM9SF1-210ENST00000530563 NCKAP5LQ9HCH0 1330 aa17.72■□□□□ 0.43
TM9SF1-210ENST00000530563 CASKIN1Q8WXD9 1431 aa17.7■□□□□ 0.42
TM9SF1-210ENST00000530563 SAMD9LQ8IVG5 1584 aa17.7■□□□□ 0.42
TM9SF1-210ENST00000530563 ZNF335Q9H4Z2 1342 aaPredicted RBP17.7■□□□□ 0.42
TM9SF1-210ENST00000530563 MROH2AA6NES4 1674 aa17.69■□□□□ 0.42
TM9SF1-210ENST00000530563 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
TM9SF1-210ENST00000530563 CCDC18Q5T9S5 1454 aa17.67■□□□□ 0.42
TM9SF1-210ENST00000530563 TCOF1Q13428 1488 aaKnown RBP17.65■□□□□ 0.42
TM9SF1-210ENST00000530563 PTPRKQ15262 1439 aa17.64■□□□□ 0.42
TM9SF1-210ENST00000530563 PLA2R1Q13018 1463 aa17.64■□□□□ 0.41
TM9SF1-210ENST00000530563 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-210ENST00000530563 UBAP1LF5GYI3 381 aa17.64■□□□□ 0.41
TM9SF1-210ENST00000530563 HNRNPMP52272 730 aaKnown RBP eCLIP17.64■□□□□ 0.41
TM9SF1-210ENST00000530563 SPAG9O60271 1321 aaKnown RBP17.64■□□□□ 0.41
TM9SF1-210ENST00000530563 PLXNC1O60486 1568 aa17.63■□□□□ 0.41
TM9SF1-210ENST00000530563 PKD2Q13563 968 aa17.63■□□□□ 0.41
TM9SF1-210ENST00000530563 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
TM9SF1-210ENST00000530563 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
TM9SF1-210ENST00000530563 ZNF142P52746 1687 aaPredicted RBP17.61■□□□□ 0.41
TM9SF1-210ENST00000530563 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
TM9SF1-210ENST00000530563 SUPT6HQ7KZ85 1726 aaKnown RBP17.61■□□□□ 0.41
TM9SF1-210ENST00000530563 MYO3AQ8NEV4 1616 aa17.6■□□□□ 0.41
TM9SF1-210ENST00000530563 CLTCQ00610 1675 aaKnown RBP17.6■□□□□ 0.41
TM9SF1-210ENST00000530563 INO80Q9ULG1 1556 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-210ENST00000530563 CEP170BQ9Y4F5 1589 aaPredicted RBP17.59■□□□□ 0.41
TM9SF1-210ENST00000530563 ATP7AQ04656 1500 aa17.59■□□□□ 0.41
TM9SF1-210ENST00000530563 A2MP01023 1474 aa17.59■□□□□ 0.41
TM9SF1-210ENST00000530563 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
TM9SF1-210ENST00000530563 CHIC1Q5VXU3 224 aa17.57■□□□□ 0.4
TM9SF1-210ENST00000530563 GGT6Q6P531 493 aa17.56■□□□□ 0.4
TM9SF1-210ENST00000530563 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
TM9SF1-210ENST00000530563 PLEKHH2Q8IVE3 1493 aa17.53■□□□□ 0.4
TM9SF1-210ENST00000530563 CFDP1Q9UEE9 299 aaPredicted RBP17.53■□□□□ 0.4
TM9SF1-210ENST00000530563 A2ML1A8K2U0 1454 aa17.52■□□□□ 0.4
TM9SF1-210ENST00000530563 DNMT1P26358 1616 aaKnown RBP17.52■□□□□ 0.4
TM9SF1-210ENST00000530563 HSPA1LP34931 641 aa17.52■□□□□ 0.4
TM9SF1-210ENST00000530563 MBD5Q9P267 1494 aa17.5■□□□□ 0.39
TM9SF1-210ENST00000530563 ZNF644Q9H582 1327 aaPredicted RBP17.5■□□□□ 0.39
TM9SF1-210ENST00000530563 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
TM9SF1-210ENST00000530563 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
TM9SF1-210ENST00000530563 FBXO31Q5XUX0 539 aaPredicted RBP17.48■□□□□ 0.39
TM9SF1-210ENST00000530563 MED1Q15648 1581 aaPredicted RBP17.47■□□□□ 0.39
TM9SF1-210ENST00000530563 ADGBQ8N7X0 1667 aa17.47■□□□□ 0.39
TM9SF1-210ENST00000530563 SHANK2Q9UPX8 1470 aa17.46■□□□□ 0.39
TM9SF1-210ENST00000530563 DHX29Q7Z478 1369 aaKnown RBP17.46■□□□□ 0.39
TM9SF1-210ENST00000530563 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms