RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 CFAP74Q9C0B2 1584 aa18.42■□□□□ 0.54
PPP1CA-206ENST00000529724 SETD1BQ9UPS6 1966 aaKnown RBP18.42■□□□□ 0.54
PPP1CA-206ENST00000529724 RAPGEF6Q8TEU7 1601 aa18.41■□□□□ 0.54
PPP1CA-206ENST00000529724 ATP10AO60312 1499 aa18.39■□□□□ 0.53
PPP1CA-206ENST00000529724 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
PPP1CA-206ENST00000529724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
PPP1CA-206ENST00000529724 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
PPP1CA-206ENST00000529724 C9orf84Q5VXU9 1444 aa18.38■□□□□ 0.53
PPP1CA-206ENST00000529724 FAM9AQ8IZU1 332 aaPredicted RBP18.37■□□□□ 0.53
PPP1CA-206ENST00000529724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
PPP1CA-206ENST00000529724 MED1Q15648 1581 aaPredicted RBP18.36■□□□□ 0.53
PPP1CA-206ENST00000529724 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
PPP1CA-206ENST00000529724 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
PPP1CA-206ENST00000529724 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
PPP1CA-206ENST00000529724 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
PPP1CA-206ENST00000529724 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
PPP1CA-206ENST00000529724 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
PPP1CA-206ENST00000529724 C3P01024 1663 aa18.28■□□□□ 0.52
PPP1CA-206ENST00000529724 ZNF335Q9H4Z2 1342 aaPredicted RBP18.28■□□□□ 0.52
PPP1CA-206ENST00000529724 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
PPP1CA-206ENST00000529724 HSPA1LP34931 641 aa18.24■□□□□ 0.51
PPP1CA-206ENST00000529724 PLCH2O75038 1416 aa18.23■□□□□ 0.51
PPP1CA-206ENST00000529724 CAMSAP1Q5T5Y3 1602 aa18.23■□□□□ 0.51
PPP1CA-206ENST00000529724 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
PPP1CA-206ENST00000529724 DIP2CQ9Y2E4 1556 aa18.19■□□□□ 0.5
PPP1CA-206ENST00000529724 NCKAP5LQ9HCH0 1330 aa18.19■□□□□ 0.5
PPP1CA-206ENST00000529724 KDM5CP41229 1560 aa18.18■□□□□ 0.5
PPP1CA-206ENST00000529724 ZNF518AQ6AHZ1 1483 aa18.16■□□□□ 0.5
PPP1CA-206ENST00000529724 AGLP35573 1532 aa18.15■□□□□ 0.5
PPP1CA-206ENST00000529724 AFAP1Q8N556 730 aa18.14■□□□□ 0.49
PPP1CA-206ENST00000529724 PHF23Q9BUL5 403 aaPredicted RBP18.14■□□□□ 0.49
PPP1CA-206ENST00000529724 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
PPP1CA-206ENST00000529724 ABCA6Q8N139 1617 aa18.12■□□□□ 0.49
PPP1CA-206ENST00000529724 NPATQ14207 1427 aa18.12■□□□□ 0.49
PPP1CA-206ENST00000529724 CDK13Q14004 1512 aaKnown RBP18.12■□□□□ 0.49
PPP1CA-206ENST00000529724 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
PPP1CA-206ENST00000529724 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
PPP1CA-206ENST00000529724 TCOF1Q13428 1488 aaKnown RBP18.11■□□□□ 0.49
PPP1CA-206ENST00000529724 PLA2R1Q13018 1463 aa18.1■□□□□ 0.49
PPP1CA-206ENST00000529724 CNTLNQ9NXG0 1405 aa18.1■□□□□ 0.49
PPP1CA-206ENST00000529724 ESF1Q9H501 851 aaKnown RBP18.09■□□□□ 0.49
PPP1CA-206ENST00000529724 PKD2Q13563 968 aa18.08■□□□□ 0.48
PPP1CA-206ENST00000529724 MYO5CQ9NQX4 1742 aa18.08■□□□□ 0.48
PPP1CA-206ENST00000529724 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
PPP1CA-206ENST00000529724 TOM1O60784 492 aa18.05■□□□□ 0.48
PPP1CA-206ENST00000529724 ZNF142P52746 1687 aaPredicted RBP18.05■□□□□ 0.48
PPP1CA-206ENST00000529724 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
PPP1CA-206ENST00000529724 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
PPP1CA-206ENST00000529724 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
PPP1CA-206ENST00000529724 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
PPP1CA-206ENST00000529724 MYO3AQ8NEV4 1616 aa18.02■□□□□ 0.48
PPP1CA-206ENST00000529724 RANGAP1P46060 587 aaPredicted RBP18.02■□□□□ 0.48
PPP1CA-206ENST00000529724 ZMYM3Q14202 1370 aa18.02■□□□□ 0.47
PPP1CA-206ENST00000529724 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
PPP1CA-206ENST00000529724 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
PPP1CA-206ENST00000529724 CPS1P31327 1500 aa18■□□□□ 0.47
PPP1CA-206ENST00000529724 ARHGAP5Q13017 1502 aa18■□□□□ 0.47
PPP1CA-206ENST00000529724 KIF14Q15058 1648 aa18■□□□□ 0.47
PPP1CA-206ENST00000529724 KIDINS220Q9ULH0 1771 aa17.96■□□□□ 0.47
PPP1CA-206ENST00000529724 PTPRKQ15262 1439 aa17.96■□□□□ 0.47
PPP1CA-206ENST00000529724 SHANK2Q9UPX8 1470 aa17.95■□□□□ 0.46
PPP1CA-206ENST00000529724 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
PPP1CA-206ENST00000529724 ABCC1P33527 1531 aa17.93■□□□□ 0.46
PPP1CA-206ENST00000529724 NEURL4Q96JN8 1562 aa17.92■□□□□ 0.46
PPP1CA-206ENST00000529724 CSRNP3Q8WYN3 585 aa17.91■□□□□ 0.46
PPP1CA-206ENST00000529724 CDC42BPBQ9Y5S2 1711 aa17.9■□□□□ 0.46
PPP1CA-206ENST00000529724 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
PPP1CA-206ENST00000529724 ITSN2Q9NZM3 1697 aa17.9■□□□□ 0.46
PPP1CA-206ENST00000529724 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
PPP1CA-206ENST00000529724 A2ML1A8K2U0 1454 aa17.88■□□□□ 0.45
PPP1CA-206ENST00000529724 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
PPP1CA-206ENST00000529724 DNMT1P26358 1616 aaKnown RBP17.88■□□□□ 0.45
PPP1CA-206ENST00000529724 SENP3Q9H4L4 574 aaPredicted RBP17.88■□□□□ 0.45
PPP1CA-206ENST00000529724 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
PPP1CA-206ENST00000529724 POTEAQ6S8J7 498 aa17.85■□□□□ 0.45
PPP1CA-206ENST00000529724 CDK11AQ9UQ88 783 aaPredicted RBP17.85■□□□□ 0.45
PPP1CA-206ENST00000529724 PREX2Q70Z35 1606 aa17.83■□□□□ 0.45
PPP1CA-206ENST00000529724 SAMD9LQ8IVG5 1584 aa17.83■□□□□ 0.45
PPP1CA-206ENST00000529724 PLXNC1O60486 1568 aa17.82■□□□□ 0.44
PPP1CA-206ENST00000529724 CLIP1P30622 1438 aa17.81■□□□□ 0.44
PPP1CA-206ENST00000529724 ATP1B4Q9UN42 357 aaPredicted RBP17.81■□□□□ 0.44
PPP1CA-206ENST00000529724 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.44
PPP1CA-206ENST00000529724 RNF17Q9BXT8 1623 aaKnown RBP17.77■□□□□ 0.44
PPP1CA-206ENST00000529724 FMN1Q68DA7 1419 aa17.77■□□□□ 0.44
PPP1CA-206ENST00000529724 STRCP1A6NGW2 1772 aa17.76■□□□□ 0.43
PPP1CA-206ENST00000529724 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
PPP1CA-206ENST00000529724 GGT6Q6P531 493 aa17.75■□□□□ 0.43
PPP1CA-206ENST00000529724 MED14O60244 1454 aa17.75■□□□□ 0.43
PPP1CA-206ENST00000529724 A2MP01023 1474 aa17.75■□□□□ 0.43
PPP1CA-206ENST00000529724 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
PPP1CA-206ENST00000529724 NPHP4O75161 1426 aaPredicted RBP17.74■□□□□ 0.43
PPP1CA-206ENST00000529724 LRRIQ1Q96JM4 1722 aa17.74■□□□□ 0.43
PPP1CA-206ENST00000529724 ATP7AQ04656 1500 aa17.73■□□□□ 0.43
PPP1CA-206ENST00000529724 ANKLE2Q86XL3 938 aa17.73■□□□□ 0.43
PPP1CA-206ENST00000529724 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.73■□□□□ 0.435e-6■■■■■ 46.2
PPP1CA-206ENST00000529724 TNRQ92752 1358 aa17.72■□□□□ 0.43
PPP1CA-206ENST00000529724 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
PPP1CA-206ENST00000529724 INO80Q9ULG1 1556 aaPredicted RBP17.71■□□□□ 0.43
PPP1CA-206ENST00000529724 DEPDC5O75140 1603 aa17.71■□□□□ 0.43
PPP1CA-206ENST00000529724 SYNMO15061 1565 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms