RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.47□□□□□ -0.09
TGFBR3-208ENST00000529608 HNRNPUL2Q1KMD3 747 aaKnown RBP14.47□□□□□ -0.09
TGFBR3-208ENST00000529608 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.09
TGFBR3-208ENST00000529608 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
TGFBR3-208ENST00000529608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.46□□□□□ -0.1
TGFBR3-208ENST00000529608 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
TGFBR3-208ENST00000529608 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
TGFBR3-208ENST00000529608 FAM9AQ8IZU1 332 aaPredicted RBP14.43□□□□□ -0.1
TGFBR3-208ENST00000529608 AKNAQ7Z591 1439 aa14.42□□□□□ -0.1
TGFBR3-208ENST00000529608 DENND4BO75064 1496 aaPredicted RBP14.42□□□□□ -0.1
TGFBR3-208ENST00000529608 FBXO41Q8TF61 875 aa14.41□□□□□ -0.1
TGFBR3-208ENST00000529608 FANCAO15360 1455 aa14.41□□□□□ -0.1
TGFBR3-208ENST00000529608 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
TGFBR3-208ENST00000529608 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
TGFBR3-208ENST00000529608 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
TGFBR3-208ENST00000529608 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
TGFBR3-208ENST00000529608 ZMYM4Q5VZL5 1548 aa14.4□□□□□ -0.1
TGFBR3-208ENST00000529608 HECW1Q76N89 1606 aa14.38□□□□□ -0.11
TGFBR3-208ENST00000529608 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
TGFBR3-208ENST00000529608 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
TGFBR3-208ENST00000529608 EFCAB5A4FU69 1503 aa14.37□□□□□ -0.11
TGFBR3-208ENST00000529608 ZBTB22O15209 634 aa14.37□□□□□ -0.11
TGFBR3-208ENST00000529608 EEA1Q15075 1411 aa14.37□□□□□ -0.11
TGFBR3-208ENST00000529608 ZFYVE16Q7Z3T8 1539 aa14.36□□□□□ -0.11
TGFBR3-208ENST00000529608 HSPA2P54652 639 aa14.35□□□□□ -0.11
TGFBR3-208ENST00000529608 FER1L4A9Z1Z3 1794 aa14.34□□□□□ -0.11
TGFBR3-208ENST00000529608 LRRIQ1Q96JM4 1722 aa14.33□□□□□ -0.12
TGFBR3-208ENST00000529608 KIF14Q15058 1648 aa14.32□□□□□ -0.12
TGFBR3-208ENST00000529608 PLCH2O75038 1416 aa14.32□□□□□ -0.12
TGFBR3-208ENST00000529608 MYO5CQ9NQX4 1742 aa14.31□□□□□ -0.12
TGFBR3-208ENST00000529608 POGZQ7Z3K3 1410 aa14.31□□□□□ -0.12
TGFBR3-208ENST00000529608 SCAPERQ9BY12 1400 aa14.31□□□□□ -0.12
TGFBR3-208ENST00000529608 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
TGFBR3-208ENST00000529608 MLECQ14165 292 aa14.3□□□□□ -0.12
TGFBR3-208ENST00000529608 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
TGFBR3-208ENST00000529608 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
TGFBR3-208ENST00000529608 ARHGAP35Q9NRY4 1499 aa14.28□□□□□ -0.12
TGFBR3-208ENST00000529608 ARHGEF12Q9NZN5 1544 aa14.28□□□□□ -0.12
TGFBR3-208ENST00000529608 ATP10AO60312 1499 aa14.25□□□□□ -0.13
TGFBR3-208ENST00000529608 PREX1Q8TCU6 1659 aa14.25□□□□□ -0.13
TGFBR3-208ENST00000529608 STRCQ7RTU9 1775 aa14.24□□□□□ -0.13
TGFBR3-208ENST00000529608 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
TGFBR3-208ENST00000529608 C9orf84Q5VXU9 1444 aa14.24□□□□□ -0.13
TGFBR3-208ENST00000529608 KDM5CP41229 1560 aa14.23□□□□□ -0.13
TGFBR3-208ENST00000529608 CEBPAP49715 358 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-208ENST00000529608 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-208ENST00000529608 ATP1B4Q9UN42 357 aaPredicted RBP14.23□□□□□ -0.13
TGFBR3-208ENST00000529608 DIP2CQ9Y2E4 1556 aa14.22□□□□□ -0.13
TGFBR3-208ENST00000529608 ABCA6Q8N139 1617 aa14.21□□□□□ -0.13
TGFBR3-208ENST00000529608 FMN1Q68DA7 1419 aa14.21□□□□□ -0.13
TGFBR3-208ENST00000529608 EFCAB2Q5VUJ9 269 aa14.2□□□□□ -0.14
TGFBR3-208ENST00000529608 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
TGFBR3-208ENST00000529608 CERKQ8TCT0 537 aa14.2□□□□□ -0.14
TGFBR3-208ENST00000529608 ARHGAP5Q13017 1502 aa14.2□□□□□ -0.14
TGFBR3-208ENST00000529608 TROQ12816 1431 aaPredicted RBP14.19□□□□□ -0.14
TGFBR3-208ENST00000529608 UBTFP17480 764 aaKnown RBP14.19□□□□□ -0.14
TGFBR3-208ENST00000529608 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
TGFBR3-208ENST00000529608 ZNF518AQ6AHZ1 1483 aa14.18□□□□□ -0.14
TGFBR3-208ENST00000529608 C3P01024 1663 aa14.18□□□□□ -0.14
TGFBR3-208ENST00000529608 PREX2Q70Z35 1606 aa14.17□□□□□ -0.14
TGFBR3-208ENST00000529608 ITSN2Q9NZM3 1697 aa14.17□□□□□ -0.14
TGFBR3-208ENST00000529608 REREQ9P2R6 1566 aa14.16□□□□□ -0.14
TGFBR3-208ENST00000529608 CDC42BPAQ5VT25 1732 aa14.15□□□□□ -0.14
TGFBR3-208ENST00000529608 ABCC1P33527 1531 aa14.15□□□□□ -0.14
TGFBR3-208ENST00000529608 TRAPPC8Q9Y2L5 1435 aa14.15□□□□□ -0.14
TGFBR3-208ENST00000529608 KIDINS220Q9ULH0 1771 aa14.14□□□□□ -0.15
TGFBR3-208ENST00000529608 MLH3Q9UHC1 1453 aa14.13□□□□□ -0.15
TGFBR3-208ENST00000529608 CAPN15O75808 1086 aa14.13□□□□□ -0.15
TGFBR3-208ENST00000529608 CDK11AQ9UQ88 783 aaPredicted RBP14.13□□□□□ -0.15
TGFBR3-208ENST00000529608 CLIP1P30622 1438 aa14.11□□□□□ -0.15
TGFBR3-208ENST00000529608 APLP2Q06481 763 aa14.11□□□□□ -0.15
TGFBR3-208ENST00000529608 UHRF1BP1Q6BDS2 1440 aa14.1□□□□□ -0.15
TGFBR3-208ENST00000529608 SETD1BQ9UPS6 1966 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-208ENST00000529608 AGLP35573 1532 aa14.1□□□□□ -0.15
TGFBR3-208ENST00000529608 CASKIN1Q8WXD9 1431 aa14.08□□□□□ -0.15
TGFBR3-208ENST00000529608 MYT1LQ9UL68 1186 aa14.08□□□□□ -0.16
TGFBR3-208ENST00000529608 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
TGFBR3-208ENST00000529608 LTBP4Q8N2S1 1624 aa14.07□□□□□ -0.16
TGFBR3-208ENST00000529608 CCDC18Q5T9S5 1454 aa14.06□□□□□ -0.16
TGFBR3-208ENST00000529608 SUPT6HQ7KZ85 1726 aaKnown RBP14.04□□□□□ -0.16
TGFBR3-208ENST00000529608 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
TGFBR3-208ENST00000529608 PTPRTO14522 1441 aa14.04□□□□□ -0.16
TGFBR3-208ENST00000529608 SYCP2Q9BX26 1530 aa14.04□□□□□ -0.16
TGFBR3-208ENST00000529608 MROH2AA6NES4 1674 aa14.03□□□□□ -0.16
TGFBR3-208ENST00000529608 GPATCH8Q9UKJ3 1502 aaKnown RBP14.02□□□□□ -0.16
TGFBR3-208ENST00000529608 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
TGFBR3-208ENST00000529608 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
TGFBR3-208ENST00000529608 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
TGFBR3-208ENST00000529608 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
TGFBR3-208ENST00000529608 INO80Q9ULG1 1556 aaPredicted RBP14□□□□□ -0.17
TGFBR3-208ENST00000529608 FYCO1Q9BQS8 1478 aa14□□□□□ -0.17
TGFBR3-208ENST00000529608 PLXNC1O60486 1568 aa14□□□□□ -0.17
TGFBR3-208ENST00000529608 DSG3P32926 999 aa13.99□□□□□ -0.17
TGFBR3-208ENST00000529608 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
TGFBR3-208ENST00000529608 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
TGFBR3-208ENST00000529608 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
TGFBR3-208ENST00000529608 DISP3Q9P2K9 1392 aa13.98□□□□□ -0.17
TGFBR3-208ENST00000529608 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
TGFBR3-208ENST00000529608 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
TGFBR3-208ENST00000529608 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms