RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 ARHGEF12Q9NZN5 1544 aa19.8■□□□□ 0.76
AMBRA1-207ENST00000529553 SCAPERQ9BY12 1400 aa19.79■□□□□ 0.76
AMBRA1-207ENST00000529553 CEBPAP49715 358 aaPredicted RBP19.79■□□□□ 0.76
AMBRA1-207ENST00000529553 PTPRTO14522 1441 aa19.77■□□□□ 0.76
AMBRA1-207ENST00000529553 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
AMBRA1-207ENST00000529553 PLCH2O75038 1416 aa19.76■□□□□ 0.75
AMBRA1-207ENST00000529553 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
AMBRA1-207ENST00000529553 C9orf84Q5VXU9 1444 aa19.76■□□□□ 0.75
AMBRA1-207ENST00000529553 UHRF1BP1Q6BDS2 1440 aa19.76■□□□□ 0.75
AMBRA1-207ENST00000529553 FER1L4A9Z1Z3 1794 aa19.75■□□□□ 0.75
AMBRA1-207ENST00000529553 PREX1Q8TCU6 1659 aa19.75■□□□□ 0.75
AMBRA1-207ENST00000529553 EFCAB2Q5VUJ9 269 aa19.74■□□□□ 0.75
AMBRA1-207ENST00000529553 SPATA31D1Q6ZQQ2 1576 aa19.71■□□□□ 0.75
AMBRA1-207ENST00000529553 STRCQ7RTU9 1775 aa19.71■□□□□ 0.75
AMBRA1-207ENST00000529553 IQSEC2Q5JU85 1478 aa19.71■□□□□ 0.75
AMBRA1-207ENST00000529553 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
AMBRA1-207ENST00000529553 RANGAP1P46060 587 aaPredicted RBP19.68■□□□□ 0.74
AMBRA1-207ENST00000529553 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.73
AMBRA1-207ENST00000529553 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
AMBRA1-207ENST00000529553 ZNF518AQ6AHZ1 1483 aa19.63■□□□□ 0.73
AMBRA1-207ENST00000529553 TRAPPC8Q9Y2L5 1435 aa19.63■□□□□ 0.73
AMBRA1-207ENST00000529553 AFAP1Q8N556 730 aa19.63■□□□□ 0.73
AMBRA1-207ENST00000529553 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
AMBRA1-207ENST00000529553 MYT1LQ9UL68 1186 aa19.58■□□□□ 0.72
AMBRA1-207ENST00000529553 EEA1Q15075 1411 aa19.57■□□□□ 0.72
AMBRA1-207ENST00000529553 NCOA1Q15788 1441 aa19.57■□□□□ 0.72
AMBRA1-207ENST00000529553 REREQ9P2R6 1566 aa19.57■□□□□ 0.72
AMBRA1-207ENST00000529553 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
AMBRA1-207ENST00000529553 KDM5CP41229 1560 aa19.55■□□□□ 0.72
AMBRA1-207ENST00000529553 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
AMBRA1-207ENST00000529553 CNTLNQ9NXG0 1405 aa19.54■□□□□ 0.72
AMBRA1-207ENST00000529553 AGLP35573 1532 aa19.54■□□□□ 0.72
AMBRA1-207ENST00000529553 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
AMBRA1-207ENST00000529553 ATP1B4Q9UN42 357 aaPredicted RBP19.51■□□□□ 0.71
AMBRA1-207ENST00000529553 NPATQ14207 1427 aa19.5■□□□□ 0.71
AMBRA1-207ENST00000529553 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
AMBRA1-207ENST00000529553 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
AMBRA1-207ENST00000529553 C3P01024 1663 aa19.49■□□□□ 0.71
AMBRA1-207ENST00000529553 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
AMBRA1-207ENST00000529553 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
AMBRA1-207ENST00000529553 PKD2Q13563 968 aa19.48■□□□□ 0.71
AMBRA1-207ENST00000529553 TROQ12816 1431 aaPredicted RBP19.47■□□□□ 0.71
AMBRA1-207ENST00000529553 ZNF335Q9H4Z2 1342 aaPredicted RBP19.46■□□□□ 0.71
AMBRA1-207ENST00000529553 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
AMBRA1-207ENST00000529553 CLIP1P30622 1438 aa19.45■□□□□ 0.7
AMBRA1-207ENST00000529553 ZMYM3Q14202 1370 aa19.44■□□□□ 0.7
AMBRA1-207ENST00000529553 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
AMBRA1-207ENST00000529553 KIF14Q15058 1648 aa19.42■□□□□ 0.7
AMBRA1-207ENST00000529553 ABCA6Q8N139 1617 aa19.41■□□□□ 0.7
AMBRA1-207ENST00000529553 PLA2R1Q13018 1463 aa19.39■□□□□ 0.69
AMBRA1-207ENST00000529553 TOM1O60784 492 aa19.35■□□□□ 0.69
AMBRA1-207ENST00000529553 PPP6R1Q9UPN7 881 aa19.35■□□□□ 0.69
AMBRA1-207ENST00000529553 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
AMBRA1-207ENST00000529553 HSPA1LP34931 641 aa19.34■□□□□ 0.69
AMBRA1-207ENST00000529553 ABCC1P33527 1531 aa19.34■□□□□ 0.69
AMBRA1-207ENST00000529553 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
AMBRA1-207ENST00000529553 UBTFP17480 764 aaKnown RBP19.33■□□□□ 0.68
AMBRA1-207ENST00000529553 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
AMBRA1-207ENST00000529553 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
AMBRA1-207ENST00000529553 SPAG9O60271 1321 aaKnown RBP19.3■□□□□ 0.68
AMBRA1-207ENST00000529553 KIDINS220Q9ULH0 1771 aa19.3■□□□□ 0.68
AMBRA1-207ENST00000529553 PTPRKQ15262 1439 aa19.3■□□□□ 0.68
AMBRA1-207ENST00000529553 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
AMBRA1-207ENST00000529553 MED1Q15648 1581 aaPredicted RBP19.27■□□□□ 0.67
AMBRA1-207ENST00000529553 SCAF1Q9H7N4 1312 aaKnown RBP19.26■□□□□ 0.67
AMBRA1-207ENST00000529553 PREX2Q70Z35 1606 aa19.26■□□□□ 0.67
AMBRA1-207ENST00000529553 ITSN2Q9NZM3 1697 aa19.26■□□□□ 0.67
AMBRA1-207ENST00000529553 SAMD9LQ8IVG5 1584 aa19.25■□□□□ 0.67
AMBRA1-207ENST00000529553 ZNF142P52746 1687 aaPredicted RBP19.24■□□□□ 0.67
AMBRA1-207ENST00000529553 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
AMBRA1-207ENST00000529553 GGT6Q6P531 493 aa19.24■□□□□ 0.67
AMBRA1-207ENST00000529553 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.672e-8■■□□□ 13.5
AMBRA1-207ENST00000529553 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
AMBRA1-207ENST00000529553 ZNF777Q9ULD5 760 aaPredicted RBP19.23■□□□□ 0.67
AMBRA1-207ENST00000529553 CPS1P31327 1500 aa19.23■□□□□ 0.67
AMBRA1-207ENST00000529553 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
AMBRA1-207ENST00000529553 KIAA1107Q9UPP5 1409 aa19.21■□□□□ 0.67
AMBRA1-207ENST00000529553 MYO3AQ8NEV4 1616 aa19.21■□□□□ 0.67
AMBRA1-207ENST00000529553 A2ML1A8K2U0 1454 aa19.21■□□□□ 0.67
AMBRA1-207ENST00000529553 A2MP01023 1474 aa19.21■□□□□ 0.67
AMBRA1-207ENST00000529553 SHANK2Q9UPX8 1470 aa19.2■□□□□ 0.66
AMBRA1-207ENST00000529553 CASKIN1Q8WXD9 1431 aa19.19■□□□□ 0.66
AMBRA1-207ENST00000529553 ANKLE2Q86XL3 938 aa19.17■□□□□ 0.66
AMBRA1-207ENST00000529553 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
AMBRA1-207ENST00000529553 CLTCQ00610 1675 aaKnown RBP19.17■□□□□ 0.66
AMBRA1-207ENST00000529553 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
AMBRA1-207ENST00000529553 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
AMBRA1-207ENST00000529553 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
AMBRA1-207ENST00000529553 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
AMBRA1-207ENST00000529553 ATP7AQ04656 1500 aa19.15■□□□□ 0.66
AMBRA1-207ENST00000529553 SUPT6HQ7KZ85 1726 aaKnown RBP19.14■□□□□ 0.66
AMBRA1-207ENST00000529553 THEMISQ8N1K5 641 aaPredicted RBP19.14■□□□□ 0.65
AMBRA1-207ENST00000529553 SYCP2Q9BX26 1530 aa19.14■□□□□ 0.65
AMBRA1-207ENST00000529553 DNMT1P26358 1616 aaKnown RBP19.14■□□□□ 0.65
AMBRA1-207ENST00000529553 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
AMBRA1-207ENST00000529553 CDC42BPAQ5VT25 1732 aa19.12■□□□□ 0.65
AMBRA1-207ENST00000529553 TNRQ92752 1358 aa19.11■□□□□ 0.65
AMBRA1-207ENST00000529553 FBXO31Q5XUX0 539 aaPredicted RBP19.09■□□□□ 0.65
AMBRA1-207ENST00000529553 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
AMBRA1-207ENST00000529553 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms