RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 MAGI2Q86UL8 1455 aa32.07■■■□□ 2.72
SSRP1-204ENST00000529002 CEBPAP49715 358 aaPredicted RBP32.05■■■□□ 2.72
SSRP1-204ENST00000529002 PREX1Q8TCU6 1659 aa32.02■■■□□ 2.72
SSRP1-204ENST00000529002 ARHGEF12Q9NZN5 1544 aa32.01■■■□□ 2.72
SSRP1-204ENST00000529002 PLCH2O75038 1416 aa32■■■□□ 2.71
SSRP1-204ENST00000529002 ATP10AO60312 1499 aa31.98■■■□□ 2.71
SSRP1-204ENST00000529002 STRCQ7RTU9 1775 aa31.98■■■□□ 2.71
SSRP1-204ENST00000529002 ILDR2Q71H61 639 aa31.96■■■□□ 2.71
SSRP1-204ENST00000529002 C9orf84Q5VXU9 1444 aa31.95■■■□□ 2.71
SSRP1-204ENST00000529002 MYO5CQ9NQX4 1742 aa31.95■■■□□ 2.7
SSRP1-204ENST00000529002 ATP1B4Q9UN42 357 aaPredicted RBP31.91■■■□□ 2.7
SSRP1-204ENST00000529002 EEA1Q15075 1411 aa31.91■■■□□ 2.7
SSRP1-204ENST00000529002 DISP3Q9P2K9 1392 aa31.9■■■□□ 2.7
SSRP1-204ENST00000529002 KIF14Q15058 1648 aa31.89■■■□□ 2.7
SSRP1-204ENST00000529002 EHMT2Q96KQ7 1210 aa31.88■■■□□ 2.69
SSRP1-204ENST00000529002 EFCAB2Q5VUJ9 269 aa31.87■■■□□ 2.69
SSRP1-204ENST00000529002 SETD1BQ9UPS6 1966 aaKnown RBP31.85■■■□□ 2.69
SSRP1-204ENST00000529002 AFAP1Q8N556 730 aa31.84■■■□□ 2.69
SSRP1-204ENST00000529002 UHRF1BP1Q6BDS2 1440 aa31.79■■■□□ 2.68
SSRP1-204ENST00000529002 MYT1LQ9UL68 1186 aa31.78■■■□□ 2.68
SSRP1-204ENST00000529002 ZNF518AQ6AHZ1 1483 aa31.78■■■□□ 2.68
SSRP1-204ENST00000529002 KDM5CP41229 1560 aa31.77■■■□□ 2.68
SSRP1-204ENST00000529002 DIP2CQ9Y2E4 1556 aa31.77■■■□□ 2.68
SSRP1-204ENST00000529002 ARHGAP5Q13017 1502 aa31.77■■■□□ 2.68
SSRP1-204ENST00000529002 C3P01024 1663 aa31.76■■■□□ 2.68
SSRP1-204ENST00000529002 DMRT2Q9Y5R5 561 aa31.76■■■□□ 2.67
SSRP1-204ENST00000529002 LRRIQ1Q96JM4 1722 aa31.75■■■□□ 2.67
SSRP1-204ENST00000529002 ABCA6Q8N139 1617 aa31.74■■■□□ 2.67
SSRP1-204ENST00000529002 SOCS7O14512 581 aa31.73■■■□□ 2.67
SSRP1-204ENST00000529002 CDC42BPBQ9Y5S2 1711 aa31.72■■■□□ 2.67
SSRP1-204ENST00000529002 ARHGAP35Q9NRY4 1499 aa31.71■■■□□ 2.67
SSRP1-204ENST00000529002 TROQ12816 1431 aaPredicted RBP31.69■■■□□ 2.66
SSRP1-204ENST00000529002 FMN1Q68DA7 1419 aa31.69■■■□□ 2.66
SSRP1-204ENST00000529002 CDK11AQ9UQ88 783 aaPredicted RBP31.68■■■□□ 2.66
SSRP1-204ENST00000529002 UBTFP17480 764 aaKnown RBP31.67■■■□□ 2.66
SSRP1-204ENST00000529002 SPATA31D1Q6ZQQ2 1576 aa31.66■■■□□ 2.66
SSRP1-204ENST00000529002 PTPRTO14522 1441 aa31.65■■■□□ 2.66
SSRP1-204ENST00000529002 REREQ9P2R6 1566 aa31.64■■■□□ 2.66
SSRP1-204ENST00000529002 LTBP4Q8N2S1 1624 aa31.64■■■□□ 2.65
SSRP1-204ENST00000529002 TRAPPC8Q9Y2L5 1435 aa31.63■■■□□ 2.65
SSRP1-204ENST00000529002 MLH3Q9UHC1 1453 aa31.6■■■□□ 2.65
SSRP1-204ENST00000529002 CLIP1P30622 1438 aa31.58■■■□□ 2.65
SSRP1-204ENST00000529002 ITSN2Q9NZM3 1697 aa31.58■■■□□ 2.65
SSRP1-204ENST00000529002 KIDINS220Q9ULH0 1771 aa31.56■■■□□ 2.64
SSRP1-204ENST00000529002 ABCC1P33527 1531 aa31.56■■■□□ 2.64
SSRP1-204ENST00000529002 AGLP35573 1532 aa31.56■■■□□ 2.64
SSRP1-204ENST00000529002 ESF1Q9H501 851 aaKnown RBP31.56■■■□□ 2.64
SSRP1-204ENST00000529002 PREX2Q70Z35 1606 aa31.56■■■□□ 2.64
SSRP1-204ENST00000529002 NCOA1Q15788 1441 aa31.53■■■□□ 2.64
SSRP1-204ENST00000529002 CDC42BPAQ5VT25 1732 aa31.49■■■□□ 2.63
SSRP1-204ENST00000529002 CAMSAP1Q5T5Y3 1602 aa31.48■■■□□ 2.63
SSRP1-204ENST00000529002 NCKAP5LQ9HCH0 1330 aa31.43■■■□□ 2.62
SSRP1-204ENST00000529002 IQSEC2Q5JU85 1478 aa31.42■■■□□ 2.62
SSRP1-204ENST00000529002 SUPT6HQ7KZ85 1726 aaKnown RBP31.42■■■□□ 2.62
SSRP1-204ENST00000529002 CNTLNQ9NXG0 1405 aa31.41■■■□□ 2.62
SSRP1-204ENST00000529002 SAMD9LQ8IVG5 1584 aa31.39■■■□□ 2.62
SSRP1-204ENST00000529002 MROH2AA6NES4 1674 aa31.39■■■□□ 2.62
SSRP1-204ENST00000529002 ZNF335Q9H4Z2 1342 aaPredicted RBP31.39■■■□□ 2.62
SSRP1-204ENST00000529002 ZNF777Q9ULD5 760 aaPredicted RBP31.38■■■□□ 2.61
SSRP1-204ENST00000529002 ZMYM3Q14202 1370 aa31.37■■■□□ 2.61
SSRP1-204ENST00000529002 CLTCQ00610 1675 aaKnown RBP31.35■■■□□ 2.61
SSRP1-204ENST00000529002 NPATQ14207 1427 aa31.34■■■□□ 2.61
SSRP1-204ENST00000529002 SYCP2Q9BX26 1530 aa31.33■■■□□ 2.61
SSRP1-204ENST00000529002 CASKIN1Q8WXD9 1431 aa31.32■■■□□ 2.61
SSRP1-204ENST00000529002 UBAP1LF5GYI3 381 aa31.32■■■□□ 2.6
SSRP1-204ENST00000529002 CCDC18Q5T9S5 1454 aa31.32■■■□□ 2.6
SSRP1-204ENST00000529002 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.6
SSRP1-204ENST00000529002 MYO3AQ8NEV4 1616 aa31.3■■■□□ 2.6
SSRP1-204ENST00000529002 SPAG9O60271 1321 aaKnown RBP31.27■■■□□ 2.6
SSRP1-204ENST00000529002 ZNF142P52746 1687 aaPredicted RBP31.27■■■□□ 2.6
SSRP1-204ENST00000529002 ATP7AQ04656 1500 aa31.24■■■□□ 2.59
SSRP1-204ENST00000529002 GPATCH8Q9UKJ3 1502 aaKnown RBP31.24■■■□□ 2.59
SSRP1-204ENST00000529002 CEP170BQ9Y4F5 1589 aaPredicted RBP31.23■■■□□ 2.59
SSRP1-204ENST00000529002 PTPRKQ15262 1439 aa31.22■■■□□ 2.59
SSRP1-204ENST00000529002 PLXNC1O60486 1568 aa31.21■■■□□ 2.59
SSRP1-204ENST00000529002 GGT6Q6P531 493 aa31.2■■■□□ 2.59
SSRP1-204ENST00000529002 INO80Q9ULG1 1556 aaPredicted RBP31.2■■■□□ 2.58
SSRP1-204ENST00000529002 PLA2R1Q13018 1463 aa31.19■■■□□ 2.58
SSRP1-204ENST00000529002 TCOF1Q13428 1488 aaKnown RBP31.19■■■□□ 2.58
SSRP1-204ENST00000529002 PKD2Q13563 968 aa31.18■■■□□ 2.58
SSRP1-204ENST00000529002 A2MP01023 1474 aa31.18■■■□□ 2.58
SSRP1-204ENST00000529002 CHIC1Q5VXU3 224 aa31.15■■■□□ 2.58
SSRP1-204ENST00000529002 FYCO1Q9BQS8 1478 aa31.14■■■□□ 2.57
SSRP1-204ENST00000529002 PPP6R1Q9UPN7 881 aa31.11■■■□□ 2.57
SSRP1-204ENST00000529002 CFDP1Q9UEE9 299 aaPredicted RBP31.1■■■□□ 2.57
SSRP1-204ENST00000529002 KIAA1107Q9UPP5 1409 aa31.09■■■□□ 2.57
SSRP1-204ENST00000529002 SCAF1Q9H7N4 1312 aaKnown RBP31.08■■■□□ 2.57
SSRP1-204ENST00000529002 DNMT1P26358 1616 aaKnown RBP31.08■■■□□ 2.57
SSRP1-204ENST00000529002 ADGBQ8N7X0 1667 aa31.07■■■□□ 2.56
SSRP1-204ENST00000529002 HSPA1LP34931 641 aa31.07■■■□□ 2.56
SSRP1-204ENST00000529002 PIP4K2BP78356 416 aa31.05■■■□□ 2.56
SSRP1-204ENST00000529002 CCNB3Q8WWL7 1395 aa31.05■■■□□ 2.56
SSRP1-204ENST00000529002 ZNF644Q9H582 1327 aaPredicted RBP31.04■■■□□ 2.56
SSRP1-204ENST00000529002 A2ML1A8K2U0 1454 aa31.04■■■□□ 2.56
SSRP1-204ENST00000529002 PLEKHH2Q8IVE3 1493 aa31.04■■■□□ 2.56
SSRP1-204ENST00000529002 MED1Q15648 1581 aaPredicted RBP31.03■■■□□ 2.56
SSRP1-204ENST00000529002 POLR1AO95602 1720 aaPredicted RBP31.03■■■□□ 2.56
SSRP1-204ENST00000529002 NEURL4Q96JN8 1562 aa31■■■□□ 2.55
SSRP1-204ENST00000529002 FBXO31Q5XUX0 539 aaPredicted RBP30.99■■■□□ 2.55
SSRP1-204ENST00000529002 TIAM1Q13009 1591 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms