RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.22
TSKU-203ENST00000527881 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
TSKU-203ENST00000527881 SLC24A1O60721 1099 aa16.42■□□□□ 0.22
TSKU-203ENST00000527881 HFM1A2PYH4 1435 aa16.42■□□□□ 0.22
TSKU-203ENST00000527881 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
TSKU-203ENST00000527881 FHOD3Q2V2M9 1422 aa16.41■□□□□ 0.22
TSKU-203ENST00000527881 CARMIL1Q5VZK9 1371 aa16.4■□□□□ 0.22
TSKU-203ENST00000527881 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.22
TSKU-203ENST00000527881 ZMYND15Q9H091 742 aa16.39■□□□□ 0.21
TSKU-203ENST00000527881 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
TSKU-203ENST00000527881 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
TSKU-203ENST00000527881 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
TSKU-203ENST00000527881 MPHOSPH9Q99550 1183 aa16.38■□□□□ 0.21
TSKU-203ENST00000527881 NAIPQ13075 1403 aa16.38■□□□□ 0.21
TSKU-203ENST00000527881 BIVM-ERCC5R4GMW8 1640 aa16.36■□□□□ 0.21
TSKU-203ENST00000527881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.36■□□□□ 0.21
TSKU-203ENST00000527881 RGS3P49796 1198 aa16.36■□□□□ 0.21
TSKU-203ENST00000527881 HSP90AA2PQ14568 343 aaPredicted RBP16.36■□□□□ 0.21
TSKU-203ENST00000527881 CRBNQ96SW2 442 aa16.36■□□□□ 0.21
TSKU-203ENST00000527881 PCF11O94913 1555 aaKnown RBP16.36■□□□□ 0.21
TSKU-203ENST00000527881 PTPN23Q9H3S7 1636 aa16.35■□□□□ 0.21
TSKU-203ENST00000527881 IGF1RP08069 1367 aa16.35■□□□□ 0.21
TSKU-203ENST00000527881 KDM5BQ9UGL1 1544 aa16.34■□□□□ 0.21
TSKU-203ENST00000527881 CUX1P39880 1505 aa16.34■□□□□ 0.21
TSKU-203ENST00000527881 PNNQ9H307 717 aaKnown RBP16.33■□□□□ 0.21
TSKU-203ENST00000527881 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.2
TSKU-203ENST00000527881 RRAGDQ9NQL2 400 aaPredicted RBP16.32■□□□□ 0.2
TSKU-203ENST00000527881 POGKQ9P215 609 aa16.32■□□□□ 0.2
TSKU-203ENST00000527881 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
TSKU-203ENST00000527881 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
TSKU-203ENST00000527881 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
TSKU-203ENST00000527881 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
TSKU-203ENST00000527881 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
TSKU-203ENST00000527881 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
TSKU-203ENST00000527881 DHX29Q7Z478 1369 aaKnown RBP16.26■□□□□ 0.19
TSKU-203ENST00000527881 CFAP43Q8NDM7 1665 aa16.26■□□□□ 0.19
TSKU-203ENST00000527881 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
TSKU-203ENST00000527881 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
TSKU-203ENST00000527881 ARID3CA6NKF2 412 aa16.23■□□□□ 0.19
TSKU-203ENST00000527881 USP47Q96K76 1375 aa16.22■□□□□ 0.19
TSKU-203ENST00000527881 PDE3BQ13370 1112 aa16.22■□□□□ 0.19
TSKU-203ENST00000527881 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
TSKU-203ENST00000527881 MYBBP1AQ9BQG0 1328 aaKnown RBP16.22■□□□□ 0.19
TSKU-203ENST00000527881 MYOM3Q5VTT5 1437 aa16.21■□□□□ 0.19
TSKU-203ENST00000527881 UNC13AQ9UPW8 1703 aa16.21■□□□□ 0.19
TSKU-203ENST00000527881 C20orf194Q5TEA3 1177 aa16.21■□□□□ 0.19
TSKU-203ENST00000527881 KTN1Q86UP2 1357 aaKnown RBP16.2■□□□□ 0.18
TSKU-203ENST00000527881 CENPQQ7L2Z9 268 aaPredicted RBP16.2■□□□□ 0.18
TSKU-203ENST00000527881 BECN1Q14457 450 aa16.2■□□□□ 0.18
TSKU-203ENST00000527881 RRP9O43818 475 aaKnown RBP16.19■□□□□ 0.18
TSKU-203ENST00000527881 KIF15Q9NS87 1388 aa16.19■□□□□ 0.18
TSKU-203ENST00000527881 GOLGA6L3A6NEY3 463 aa16.18■□□□□ 0.18
TSKU-203ENST00000527881 C8orf34Q49A92 452 aa16.18■□□□□ 0.18
TSKU-203ENST00000527881 PODXL2Q9NZ53 605 aa16.18■□□□□ 0.18
TSKU-203ENST00000527881 RALBP1Q15311 655 aa16.17■□□□□ 0.18
TSKU-203ENST00000527881 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
TSKU-203ENST00000527881 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
TSKU-203ENST00000527881 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
TSKU-203ENST00000527881 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
TSKU-203ENST00000527881 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
TSKU-203ENST00000527881 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
TSKU-203ENST00000527881 CFTRP13569 1480 aa16.15■□□□□ 0.18
TSKU-203ENST00000527881 NLRP13Q86W25 1043 aa16.15■□□□□ 0.18
TSKU-203ENST00000527881 CC2D1BQ5T0F9 858 aaKnown RBP16.12■□□□□ 0.17
TSKU-203ENST00000527881 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
TSKU-203ENST00000527881 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
TSKU-203ENST00000527881 DENND4BO75064 1496 aaPredicted RBP16.12■□□□□ 0.17
TSKU-203ENST00000527881 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
TSKU-203ENST00000527881 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
TSKU-203ENST00000527881 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.11■□□□□ 0.17
TSKU-203ENST00000527881 MIA2Q96PC5 1412 aa16.11■□□□□ 0.17
TSKU-203ENST00000527881 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.17
TSKU-203ENST00000527881 RPRD2Q5VT52 1461 aaKnown RBP16.1■□□□□ 0.17
TSKU-203ENST00000527881 ST20-MTHFSA0A0A6YYL1 179 aa16.1■□□□□ 0.17
TSKU-203ENST00000527881 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
TSKU-203ENST00000527881 CLCN1P35523 988 aa16.09■□□□□ 0.17
TSKU-203ENST00000527881 TRIM44Q96DX7 344 aaPredicted RBP16.09■□□□□ 0.17
TSKU-203ENST00000527881 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.17
TSKU-203ENST00000527881 KDM2BQ8NHM5 1336 aa16.08■□□□□ 0.16
TSKU-203ENST00000527881 HECW1Q76N89 1606 aa16.06■□□□□ 0.16
TSKU-203ENST00000527881 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
TSKU-203ENST00000527881 TEX14Q8IWB6 1497 aa16.06■□□□□ 0.16
TSKU-203ENST00000527881 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
TSKU-203ENST00000527881 KDM6BO15054 1643 aa16.05■□□□□ 0.16
TSKU-203ENST00000527881 ABCA5Q8WWZ7 1642 aa16.05■□□□□ 0.16
TSKU-203ENST00000527881 CANXP27824 592 aaKnown RBP16.02■□□□□ 0.16
TSKU-203ENST00000527881 A0A0U1RQG5 324 aaPredicted RBP16.02■□□□□ 0.16
TSKU-203ENST00000527881 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
TSKU-203ENST00000527881 ESPNB1AK53 854 aa16.01■□□□□ 0.15
TSKU-203ENST00000527881 SEC24BO95487 1268 aa16.01■□□□□ 0.15
TSKU-203ENST00000527881 PKD2Q13563 968 aa16.01■□□□□ 0.15
TSKU-203ENST00000527881 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
TSKU-203ENST00000527881 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
TSKU-203ENST00000527881 BCORL1Q5H9F3 1711 aa15.98■□□□□ 0.15
TSKU-203ENST00000527881 MRE11P49959 708 aa15.98■□□□□ 0.15
TSKU-203ENST00000527881 TRAK2O60296 914 aa15.97■□□□□ 0.15
TSKU-203ENST00000527881 MCM4P33991 863 aa15.97■□□□□ 0.15
TSKU-203ENST00000527881 ARID3AQ99856 593 aa15.97■□□□□ 0.15
TSKU-203ENST00000527881 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
TSKU-203ENST00000527881 GOLGA2Q08379 1002 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms