RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 NEFMP07197 916 aa10.04□□□□□ -0.8
SOX6-208ENST00000527619 ZBED9Q6R2W3 1325 aa10.04□□□□□ -0.8
SOX6-208ENST00000527619 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
SOX6-208ENST00000527619 PRDM2Q13029 1718 aa10.03□□□□□ -0.8
SOX6-208ENST00000527619 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.8
SOX6-208ENST00000527619 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
SOX6-208ENST00000527619 TONSLQ96HA7 1378 aa10.01□□□□□ -0.81
SOX6-208ENST00000527619 PPM1GO15355 546 aaPredicted RBP10□□□□□ -0.81
SOX6-208ENST00000527619 THOC2Q8NI27 1593 aaKnown RBP10□□□□□ -0.81
SOX6-208ENST00000527619 FHAD1B1AJZ9 1412 aa10□□□□□ -0.81
SOX6-208ENST00000527619 BRPF3Q9ULD4 1205 aa10□□□□□ -0.81
SOX6-208ENST00000527619 MAP3K1Q13233 1512 aa9.99□□□□□ -0.81
SOX6-208ENST00000527619 TIAM1Q13009 1591 aa9.99□□□□□ -0.81
SOX6-208ENST00000527619 LAS1LQ9Y4W2 734 aaKnown RBP9.99□□□□□ -0.81
SOX6-208ENST00000527619 URB2Q14146 1524 aaKnown RBP9.97□□□□□ -0.81
SOX6-208ENST00000527619 TOP2BQ02880 1626 aa9.97□□□□□ -0.81
SOX6-208ENST00000527619 ARHGAP35Q9NRY4 1499 aa9.97□□□□□ -0.81
SOX6-208ENST00000527619 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
SOX6-208ENST00000527619 WDR62O43379 1518 aa9.96□□□□□ -0.81
SOX6-208ENST00000527619 SMG6Q86US8 1419 aaKnown RBP9.96□□□□□ -0.81
SOX6-208ENST00000527619 GSE1Q14687 1217 aa9.96□□□□□ -0.81
SOX6-208ENST00000527619 CNTLNQ9NXG0 1405 aa9.96□□□□□ -0.82
SOX6-208ENST00000527619 CCDC184Q52MB2 194 aa9.96□□□□□ -0.82
SOX6-208ENST00000527619 FAM9BQ8IZU0 186 aa9.96□□□□□ -0.82
SOX6-208ENST00000527619 CHMP4BQ9H444 224 aaKnown RBP9.96□□□□□ -0.82
SOX6-208ENST00000527619 RNF123Q5XPI4 1314 aa9.95□□□□□ -0.82
SOX6-208ENST00000527619 IPO4Q8TEX9 1081 aaKnown RBP9.95□□□□□ -0.82
SOX6-208ENST00000527619 BBXQ8WY36 941 aaPredicted RBP9.95□□□□□ -0.82
SOX6-208ENST00000527619 AKNAQ7Z591 1439 aa9.94□□□□□ -0.82
SOX6-208ENST00000527619 TOPBP1Q92547 1522 aa9.94□□□□□ -0.82
SOX6-208ENST00000527619 ARID3AQ99856 593 aa9.94□□□□□ -0.82
SOX6-208ENST00000527619 PHLDB1Q86UU1 1377 aa9.94□□□□□ -0.82
SOX6-208ENST00000527619 LRRC9Q6ZRR7 1453 aa9.93□□□□□ -0.82
SOX6-208ENST00000527619 FAM50AQ14320 339 aaKnown RBP9.93□□□□□ -0.82
SOX6-208ENST00000527619 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
SOX6-208ENST00000527619 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
SOX6-208ENST00000527619 BCCIPQ9P287 314 aaKnown RBP eCLIP9.93□□□□□ -0.82
SOX6-208ENST00000527619 HSP90AA2PQ14568 343 aaPredicted RBP9.92□□□□□ -0.82
SOX6-208ENST00000527619 RRP9O43818 475 aaKnown RBP9.92□□□□□ -0.82
SOX6-208ENST00000527619 POLR3GLQ9BT43 218 aa9.92□□□□□ -0.82
SOX6-208ENST00000527619 PRKRIP1Q9H875 184 aaPredicted RBP9.92□□□□□ -0.82
SOX6-208ENST00000527619 DNMBPQ6XZF7 1577 aa9.92□□□□□ -0.82
SOX6-208ENST00000527619 TCERG1O14776 1098 aaKnown RBP9.91□□□□□ -0.82
SOX6-208ENST00000527619 NUDCQ9Y266 331 aa9.91□□□□□ -0.82
SOX6-208ENST00000527619 KDM5BQ9UGL1 1544 aa9.91□□□□□ -0.82
SOX6-208ENST00000527619 FAM43AQ8N2R8 423 aa9.91□□□□□ -0.82
SOX6-208ENST00000527619 HSP90B1P14625 803 aaKnown RBP9.9□□□□□ -0.82
SOX6-208ENST00000527619 HSPA5P11021 654 aaKnown RBP9.9□□□□□ -0.82
SOX6-208ENST00000527619 CUX1P39880 1505 aa9.89□□□□□ -0.83
SOX6-208ENST00000527619 PDE4AP27815 886 aa9.89□□□□□ -0.83
SOX6-208ENST00000527619 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
SOX6-208ENST00000527619 CFAP43Q8NDM7 1665 aa9.89□□□□□ -0.83
SOX6-208ENST00000527619 FRAT1Q92837 279 aaPredicted RBP9.89□□□□□ -0.83
SOX6-208ENST00000527619 DDRGK1Q96HY6 314 aa9.89□□□□□ -0.83
SOX6-208ENST00000527619 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.83
SOX6-208ENST00000527619 BACH2Q9BYV9 841 aa9.88□□□□□ -0.83
SOX6-208ENST00000527619 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
SOX6-208ENST00000527619 CCDC18Q5T9S5 1454 aa9.87□□□□□ -0.83
SOX6-208ENST00000527619 MS4A1P11836 297 aa9.87□□□□□ -0.83
SOX6-208ENST00000527619 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
SOX6-208ENST00000527619 NFKBIBQ15653 356 aa9.87□□□□□ -0.83
SOX6-208ENST00000527619 CANXP27824 592 aaKnown RBP9.86□□□□□ -0.83
SOX6-208ENST00000527619 POLA1P09884 1462 aaPredicted RBP9.86□□□□□ -0.83
SOX6-208ENST00000527619 EIF4G2P78344 907 aaKnown RBP eCLIP9.86□□□□□ -0.83
SOX6-208ENST00000527619 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
SOX6-208ENST00000527619 CCDC7Q96M83 1385 aa9.85□□□□□ -0.83
SOX6-208ENST00000527619 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
SOX6-208ENST00000527619 IFT140Q96RY7 1462 aa9.85□□□□□ -0.83
SOX6-208ENST00000527619 TEX2Q8IWB9 1127 aa9.84□□□□□ -0.83
SOX6-208ENST00000527619 RAD54L2Q9Y4B4 1467 aa9.84□□□□□ -0.83
SOX6-208ENST00000527619 KIF27Q86VH2 1401 aa9.83□□□□□ -0.84
SOX6-208ENST00000527619 ABCA5Q8WWZ7 1642 aa9.83□□□□□ -0.84
SOX6-208ENST00000527619 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
SOX6-208ENST00000527619 FTSJ3Q8IY81 847 aaKnown RBP9.82□□□□□ -0.84
SOX6-208ENST00000527619 PRDM4Q9UKN5 801 aa9.82□□□□□ -0.84
SOX6-208ENST00000527619 CNGB1Q14028 1251 aaPredicted RBP9.82□□□□□ -0.84
SOX6-208ENST00000527619 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
SOX6-208ENST00000527619 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
SOX6-208ENST00000527619 HFM1A2PYH4 1435 aa9.82□□□□□ -0.84
SOX6-208ENST00000527619 STAC3Q96MF2 364 aa9.81□□□□□ -0.84
SOX6-208ENST00000527619 SECISBP2LQ93073 1101 aaKnown RBP9.81□□□□□ -0.84
SOX6-208ENST00000527619 ZNF608Q9ULD9 1512 aaPredicted RBP9.81□□□□□ -0.84
SOX6-208ENST00000527619 CALD1Q05682 793 aaKnown RBP9.8□□□□□ -0.84
SOX6-208ENST00000527619 TDRD9Q8NDG6 1382 aaKnown RBP9.8□□□□□ -0.84
SOX6-208ENST00000527619 CHRM1P11229 460 aaPredicted RBP9.79□□□□□ -0.84
SOX6-208ENST00000527619 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
SOX6-208ENST00000527619 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
SOX6-208ENST00000527619 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
SOX6-208ENST00000527619 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
SOX6-208ENST00000527619 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.84
SOX6-208ENST00000527619 PCF11O94913 1555 aaKnown RBP9.79□□□□□ -0.84
SOX6-208ENST00000527619 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
SOX6-208ENST00000527619 RRP1P56182 461 aaKnown RBP9.79□□□□□ -0.84
SOX6-208ENST00000527619 DCAF11Q8TEB1 546 aa9.79□□□□□ -0.84
SOX6-208ENST00000527619 EXOC6Q8TAG9 804 aa9.78□□□□□ -0.84
SOX6-208ENST00000527619 RGS3P49796 1198 aa9.77□□□□□ -0.85
SOX6-208ENST00000527619 FGD6Q6ZV73 1430 aa9.76□□□□□ -0.85
SOX6-208ENST00000527619 NAIPQ13075 1403 aa9.76□□□□□ -0.85
SOX6-208ENST00000527619 FMN1Q68DA7 1419 aa9.76□□□□□ -0.85
SOX6-208ENST00000527619 CNPY4Q8N129 248 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms