RNA–Protein interactions for RNA: ENST00000526118.1

CAPN11-203, Transcript of calpain 11, humanhuman

TSL 4

Gene CAPN11, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-203ENST00000526118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.49■□□□□ 0.71
CAPN11-203ENST00000526118 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
CAPN11-203ENST00000526118 SPATA31D1Q6ZQQ2 1576 aa19.48■□□□□ 0.71
CAPN11-203ENST00000526118 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
CAPN11-203ENST00000526118 ARHGEF12Q9NZN5 1544 aa19.44■□□□□ 0.7
CAPN11-203ENST00000526118 STRCQ7RTU9 1775 aa19.43■□□□□ 0.7
CAPN11-203ENST00000526118 CEBPAP49715 358 aaPredicted RBP19.43■□□□□ 0.7
CAPN11-203ENST00000526118 SCAPERQ9BY12 1400 aa19.42■□□□□ 0.7
CAPN11-203ENST00000526118 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
CAPN11-203ENST00000526118 ATP10AO60312 1499 aa19.41■□□□□ 0.7
CAPN11-203ENST00000526118 UHRF1BP1Q6BDS2 1440 aa19.41■□□□□ 0.7
CAPN11-203ENST00000526118 SETD1BQ9UPS6 1966 aaKnown RBP19.4■□□□□ 0.7
CAPN11-203ENST00000526118 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
CAPN11-203ENST00000526118 PLCH2O75038 1416 aa19.35■□□□□ 0.69
CAPN11-203ENST00000526118 PTPRTO14522 1441 aa19.33■□□□□ 0.68
CAPN11-203ENST00000526118 MYT1LQ9UL68 1186 aa19.32■□□□□ 0.68
CAPN11-203ENST00000526118 MYO5CQ9NQX4 1742 aa19.31■□□□□ 0.68
CAPN11-203ENST00000526118 CDK13Q14004 1512 aaKnown RBP19.31■□□□□ 0.68
CAPN11-203ENST00000526118 EFCAB2Q5VUJ9 269 aa19.31■□□□□ 0.68
CAPN11-203ENST00000526118 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
CAPN11-203ENST00000526118 ZNF518AQ6AHZ1 1483 aa19.28■□□□□ 0.68
CAPN11-203ENST00000526118 IQSEC2Q5JU85 1478 aa19.27■□□□□ 0.67
CAPN11-203ENST00000526118 C3P01024 1663 aa19.27■□□□□ 0.67
CAPN11-203ENST00000526118 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
CAPN11-203ENST00000526118 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
CAPN11-203ENST00000526118 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
CAPN11-203ENST00000526118 KDM5CP41229 1560 aa19.23■□□□□ 0.67
CAPN11-203ENST00000526118 ARHGAP5Q13017 1502 aa19.22■□□□□ 0.67
CAPN11-203ENST00000526118 CDK11AQ9UQ88 783 aaPredicted RBP19.22■□□□□ 0.67
CAPN11-203ENST00000526118 DIP2CQ9Y2E4 1556 aa19.22■□□□□ 0.67
CAPN11-203ENST00000526118 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
CAPN11-203ENST00000526118 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
CAPN11-203ENST00000526118 EEA1Q15075 1411 aa19.19■□□□□ 0.66
CAPN11-203ENST00000526118 NCOA1Q15788 1441 aa19.19■□□□□ 0.66
CAPN11-203ENST00000526118 KIF14Q15058 1648 aa19.19■□□□□ 0.66
CAPN11-203ENST00000526118 ABCA6Q8N139 1617 aa19.18■□□□□ 0.66
CAPN11-203ENST00000526118 UBAP1LF5GYI3 381 aa19.16■□□□□ 0.66
CAPN11-203ENST00000526118 AGLP35573 1532 aa19.15■□□□□ 0.66
CAPN11-203ENST00000526118 CLIP1P30622 1438 aa19.14■□□□□ 0.65
CAPN11-203ENST00000526118 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
CAPN11-203ENST00000526118 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
CAPN11-203ENST00000526118 CAMSAP1Q5T5Y3 1602 aa19.14■□□□□ 0.65
CAPN11-203ENST00000526118 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
CAPN11-203ENST00000526118 TROQ12816 1431 aaPredicted RBP19.12■□□□□ 0.65
CAPN11-203ENST00000526118 ZNF335Q9H4Z2 1342 aaPredicted RBP19.1■□□□□ 0.65
CAPN11-203ENST00000526118 CDC42BPBQ9Y5S2 1711 aa19.1■□□□□ 0.65
CAPN11-203ENST00000526118 NCKAP5LQ9HCH0 1330 aa19.08■□□□□ 0.65
CAPN11-203ENST00000526118 NPATQ14207 1427 aa19.08■□□□□ 0.64
CAPN11-203ENST00000526118 ABCC1P33527 1531 aa19.06■□□□□ 0.64
CAPN11-203ENST00000526118 SUPT6HQ7KZ85 1726 aaKnown RBP19.06■□□□□ 0.64
CAPN11-203ENST00000526118 MROH2AA6NES4 1674 aa19.06■□□□□ 0.64
CAPN11-203ENST00000526118 ITSN2Q9NZM3 1697 aa19.06■□□□□ 0.64
CAPN11-203ENST00000526118 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
CAPN11-203ENST00000526118 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
CAPN11-203ENST00000526118 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
CAPN11-203ENST00000526118 PKD2Q13563 968 aa19.03■□□□□ 0.64
CAPN11-203ENST00000526118 ZMYM3Q14202 1370 aa19.03■□□□□ 0.64
CAPN11-203ENST00000526118 SCAF1Q9H7N4 1312 aaKnown RBP19.02■□□□□ 0.64
CAPN11-203ENST00000526118 EHMT2Q96KQ7 1210 aa19.02■□□□□ 0.64
CAPN11-203ENST00000526118 PLA2R1Q13018 1463 aa19■□□□□ 0.63
CAPN11-203ENST00000526118 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
CAPN11-203ENST00000526118 LRRIQ1Q96JM4 1722 aa19■□□□□ 0.63
CAPN11-203ENST00000526118 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
CAPN11-203ENST00000526118 ZNF142P52746 1687 aaPredicted RBP18.99■□□□□ 0.63
CAPN11-203ENST00000526118 MED1Q15648 1581 aaPredicted RBP18.99■□□□□ 0.63
CAPN11-203ENST00000526118 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
CAPN11-203ENST00000526118 CLTCQ00610 1675 aaKnown RBP18.98■□□□□ 0.63
CAPN11-203ENST00000526118 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
CAPN11-203ENST00000526118 PIP4K2BP78356 416 aa18.97■□□□□ 0.63
CAPN11-203ENST00000526118 HSPA1LP34931 641 aa18.96■□□□□ 0.63
CAPN11-203ENST00000526118 TCOF1Q13428 1488 aaKnown RBP18.96■□□□□ 0.63
CAPN11-203ENST00000526118 CDC42BPAQ5VT25 1732 aa18.95■□□□□ 0.62
CAPN11-203ENST00000526118 SAMD9LQ8IVG5 1584 aa18.95■□□□□ 0.62
CAPN11-203ENST00000526118 ZNF777Q9ULD5 760 aaPredicted RBP18.95■□□□□ 0.62
CAPN11-203ENST00000526118 SPAG9O60271 1321 aaKnown RBP18.94■□□□□ 0.62
CAPN11-203ENST00000526118 TOM1O60784 492 aa18.93■□□□□ 0.62
CAPN11-203ENST00000526118 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
CAPN11-203ENST00000526118 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
CAPN11-203ENST00000526118 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
CAPN11-203ENST00000526118 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
CAPN11-203ENST00000526118 GGT6Q6P531 493 aa18.89■□□□□ 0.61
CAPN11-203ENST00000526118 CPS1P31327 1500 aa18.88■□□□□ 0.61
CAPN11-203ENST00000526118 ATP7AQ04656 1500 aa18.88■□□□□ 0.61
CAPN11-203ENST00000526118 A2MP01023 1474 aa18.87■□□□□ 0.61
CAPN11-203ENST00000526118 HNRNPMP52272 730 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN11-203ENST00000526118 PLXNC1O60486 1568 aa18.85■□□□□ 0.61
CAPN11-203ENST00000526118 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
CAPN11-203ENST00000526118 POLR1AO95602 1720 aaPredicted RBP18.85■□□□□ 0.61
CAPN11-203ENST00000526118 DNMT1P26358 1616 aaKnown RBP18.84■□□□□ 0.61
CAPN11-203ENST00000526118 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.61
CAPN11-203ENST00000526118 INO80Q9ULG1 1556 aaPredicted RBP18.83■□□□□ 0.6
CAPN11-203ENST00000526118 SHANK2Q9UPX8 1470 aa18.83■□□□□ 0.6
CAPN11-203ENST00000526118 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
CAPN11-203ENST00000526118 GPATCH8Q9UKJ3 1502 aaKnown RBP18.79■□□□□ 0.6
CAPN11-203ENST00000526118 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
CAPN11-203ENST00000526118 KIAA1107Q9UPP5 1409 aa18.79■□□□□ 0.6
CAPN11-203ENST00000526118 NEURL4Q96JN8 1562 aa18.78■□□□□ 0.6
CAPN11-203ENST00000526118 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
CAPN11-203ENST00000526118 SENP3Q9H4L4 574 aaPredicted RBP18.76■□□□□ 0.59
CAPN11-203ENST00000526118 TNRQ92752 1358 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms