RNA–Protein interactions for RNA: ENST00000524815.5

PACS1-203, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4 BASIC

Gene PACS1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-203ENST00000524815 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
PACS1-203ENST00000524815 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
PACS1-203ENST00000524815 EEA1Q15075 1411 aa25.06■■□□□ 1.6
PACS1-203ENST00000524815 ARHGEF12Q9NZN5 1544 aa25.05■■□□□ 1.6
PACS1-203ENST00000524815 ATP10AO60312 1499 aa25.03■■□□□ 1.6
PACS1-203ENST00000524815 CEBPAP49715 358 aaPredicted RBP25.01■■□□□ 1.59
PACS1-203ENST00000524815 C9orf84Q5VXU9 1444 aa25■■□□□ 1.59
PACS1-203ENST00000524815 EFCAB2Q5VUJ9 269 aa24.97■■□□□ 1.59
PACS1-203ENST00000524815 PREX1Q8TCU6 1659 aa24.96■■□□□ 1.59
PACS1-203ENST00000524815 STRCQ7RTU9 1775 aa24.92■■□□□ 1.58
PACS1-203ENST00000524815 ILDR2Q71H61 639 aa24.91■■□□□ 1.58
PACS1-203ENST00000524815 DMRT2Q9Y5R5 561 aa24.91■■□□□ 1.58
PACS1-203ENST00000524815 AFAP1Q8N556 730 aa24.9■■□□□ 1.58
PACS1-203ENST00000524815 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
PACS1-203ENST00000524815 MYO5CQ9NQX4 1742 aa24.89■■□□□ 1.58
PACS1-203ENST00000524815 DISP3Q9P2K9 1392 aa24.88■■□□□ 1.57
PACS1-203ENST00000524815 ZNF518AQ6AHZ1 1483 aa24.88■■□□□ 1.57
PACS1-203ENST00000524815 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
PACS1-203ENST00000524815 KIF14Q15058 1648 aa24.86■■□□□ 1.57
PACS1-203ENST00000524815 KDM5CP41229 1560 aa24.86■■□□□ 1.57
PACS1-203ENST00000524815 CDK11AQ9UQ88 783 aaPredicted RBP24.85■■□□□ 1.57
PACS1-203ENST00000524815 FMN1Q68DA7 1419 aa24.85■■□□□ 1.57
PACS1-203ENST00000524815 SETD1BQ9UPS6 1966 aaKnown RBP24.82■■□□□ 1.56
PACS1-203ENST00000524815 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
PACS1-203ENST00000524815 DIP2CQ9Y2E4 1556 aa24.81■■□□□ 1.56
PACS1-203ENST00000524815 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
PACS1-203ENST00000524815 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
PACS1-203ENST00000524815 SOCS7O14512 581 aa24.8■■□□□ 1.56
PACS1-203ENST00000524815 MYT1LQ9UL68 1186 aa24.8■■□□□ 1.56
PACS1-203ENST00000524815 PTPRTO14522 1441 aa24.79■■□□□ 1.56
PACS1-203ENST00000524815 REREQ9P2R6 1566 aa24.79■■□□□ 1.56
PACS1-203ENST00000524815 EHMT2Q96KQ7 1210 aa24.78■■□□□ 1.56
PACS1-203ENST00000524815 UBTFP17480 764 aaKnown RBP24.77■■□□□ 1.56
PACS1-203ENST00000524815 MLH3Q9UHC1 1453 aa24.77■■□□□ 1.56
PACS1-203ENST00000524815 C3P01024 1663 aa24.75■■□□□ 1.55
PACS1-203ENST00000524815 ABCA6Q8N139 1617 aa24.75■■□□□ 1.55
PACS1-203ENST00000524815 CLIP1P30622 1438 aa24.74■■□□□ 1.55
PACS1-203ENST00000524815 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
PACS1-203ENST00000524815 AGLP35573 1532 aa24.72■■□□□ 1.55
PACS1-203ENST00000524815 LTBP4Q8N2S1 1624 aa24.72■■□□□ 1.55
PACS1-203ENST00000524815 CDC42BPBQ9Y5S2 1711 aa24.71■■□□□ 1.55
PACS1-203ENST00000524815 LRRIQ1Q96JM4 1722 aa24.7■■□□□ 1.54
PACS1-203ENST00000524815 ESF1Q9H501 851 aaKnown RBP24.68■■□□□ 1.54
PACS1-203ENST00000524815 NCOA1Q15788 1441 aa24.67■■□□□ 1.54
PACS1-203ENST00000524815 ABCC1P33527 1531 aa24.66■■□□□ 1.54
PACS1-203ENST00000524815 SPATA31D1Q6ZQQ2 1576 aa24.66■■□□□ 1.54
PACS1-203ENST00000524815 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
PACS1-203ENST00000524815 CNTLNQ9NXG0 1405 aa24.63■■□□□ 1.53
PACS1-203ENST00000524815 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
PACS1-203ENST00000524815 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
PACS1-203ENST00000524815 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
PACS1-203ENST00000524815 NPATQ14207 1427 aa24.57■■□□□ 1.52
PACS1-203ENST00000524815 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
PACS1-203ENST00000524815 ZMYM3Q14202 1370 aa24.55■■□□□ 1.52
PACS1-203ENST00000524815 NCKAP5LQ9HCH0 1330 aa24.55■■□□□ 1.52
PACS1-203ENST00000524815 CASKIN1Q8WXD9 1431 aa24.54■■□□□ 1.52
PACS1-203ENST00000524815 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
PACS1-203ENST00000524815 CCDC18Q5T9S5 1454 aa24.53■■□□□ 1.52
PACS1-203ENST00000524815 CDC42BPAQ5VT25 1732 aa24.53■■□□□ 1.52
PACS1-203ENST00000524815 ZNF335Q9H4Z2 1342 aaPredicted RBP24.52■■□□□ 1.52
PACS1-203ENST00000524815 MROH2AA6NES4 1674 aa24.52■■□□□ 1.52
PACS1-203ENST00000524815 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
PACS1-203ENST00000524815 SPAG9O60271 1321 aaKnown RBP24.49■■□□□ 1.51
PACS1-203ENST00000524815 HNRNPMP52272 730 aaKnown RBP eCLIP24.48■■□□□ 1.51
PACS1-203ENST00000524815 SYCP2Q9BX26 1530 aa24.46■■□□□ 1.51
PACS1-203ENST00000524815 UBAP1LF5GYI3 381 aa24.46■■□□□ 1.51
PACS1-203ENST00000524815 GPATCH8Q9UKJ3 1502 aaKnown RBP24.45■■□□□ 1.51
PACS1-203ENST00000524815 SUPT6HQ7KZ85 1726 aaKnown RBP24.45■■□□□ 1.5
PACS1-203ENST00000524815 PKD2Q13563 968 aa24.45■■□□□ 1.5
PACS1-203ENST00000524815 PLA2R1Q13018 1463 aa24.43■■□□□ 1.5
PACS1-203ENST00000524815 PTPRKQ15262 1439 aa24.43■■□□□ 1.5
PACS1-203ENST00000524815 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
PACS1-203ENST00000524815 CLTCQ00610 1675 aaKnown RBP24.42■■□□□ 1.5
PACS1-203ENST00000524815 MYO3AQ8NEV4 1616 aa24.41■■□□□ 1.5
PACS1-203ENST00000524815 PLXNC1O60486 1568 aa24.41■■□□□ 1.5
PACS1-203ENST00000524815 ATP7AQ04656 1500 aa24.4■■□□□ 1.5
PACS1-203ENST00000524815 ZNF142P52746 1687 aaPredicted RBP24.4■■□□□ 1.5
PACS1-203ENST00000524815 A2MP01023 1474 aa24.4■■□□□ 1.5
PACS1-203ENST00000524815 CHIC1Q5VXU3 224 aa24.4■■□□□ 1.5
PACS1-203ENST00000524815 KIAA1107Q9UPP5 1409 aa24.39■■□□□ 1.5
PACS1-203ENST00000524815 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
PACS1-203ENST00000524815 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
PACS1-203ENST00000524815 GGT6Q6P531 493 aa24.38■■□□□ 1.49
PACS1-203ENST00000524815 INO80Q9ULG1 1556 aaPredicted RBP24.37■■□□□ 1.49
PACS1-203ENST00000524815 CFDP1Q9UEE9 299 aaPredicted RBP24.35■■□□□ 1.49
PACS1-203ENST00000524815 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
PACS1-203ENST00000524815 PLEKHH2Q8IVE3 1493 aa24.33■■□□□ 1.49
PACS1-203ENST00000524815 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
PACS1-203ENST00000524815 A2ML1A8K2U0 1454 aa24.28■■□□□ 1.48
PACS1-203ENST00000524815 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
PACS1-203ENST00000524815 DNMT1P26358 1616 aaKnown RBP24.27■■□□□ 1.48
PACS1-203ENST00000524815 HSPA1LP34931 641 aa24.26■■□□□ 1.47
PACS1-203ENST00000524815 ADGBQ8N7X0 1667 aa24.24■■□□□ 1.47
PACS1-203ENST00000524815 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
PACS1-203ENST00000524815 PIP4K2BP78356 416 aa24.22■■□□□ 1.47
PACS1-203ENST00000524815 FBXO31Q5XUX0 539 aaPredicted RBP24.22■■□□□ 1.47
PACS1-203ENST00000524815 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.47
PACS1-203ENST00000524815 MTUS2Q5JR59 1369 aa24.2■■□□□ 1.46
PACS1-203ENST00000524815 DHX29Q7Z478 1369 aaKnown RBP24.2■■□□□ 1.46
PACS1-203ENST00000524815 SCAF1Q9H7N4 1312 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms