RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 GTF3C3Q9Y5Q9 886 aa19.82■□□□□ 0.76
LDLRAD3-202ENST00000524419 ROCK1Q13464 1354 aa19.81■□□□□ 0.76
LDLRAD3-202ENST00000524419 ABCC5O15440 1437 aa19.79■□□□□ 0.76
LDLRAD3-202ENST00000524419 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
LDLRAD3-202ENST00000524419 ADGBQ8N7X0 1667 aa19.79■□□□□ 0.76
LDLRAD3-202ENST00000524419 TONSLQ96HA7 1378 aa19.78■□□□□ 0.76
LDLRAD3-202ENST00000524419 SHROOM2Q13796 1616 aa19.78■□□□□ 0.76
LDLRAD3-202ENST00000524419 GPATCH8Q9UKJ3 1502 aaKnown RBP19.78■□□□□ 0.76
LDLRAD3-202ENST00000524419 CROCC2H7BZ55 1655 aa19.77■□□□□ 0.76
LDLRAD3-202ENST00000524419 ATP10BO94823 1461 aa19.76■□□□□ 0.75
LDLRAD3-202ENST00000524419 CDC42BPAQ5VT25 1732 aa19.75■□□□□ 0.75
LDLRAD3-202ENST00000524419 PTPRGP23470 1445 aa19.74■□□□□ 0.75
LDLRAD3-202ENST00000524419 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
LDLRAD3-202ENST00000524419 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
LDLRAD3-202ENST00000524419 CFDP1Q9UEE9 299 aaPredicted RBP19.74■□□□□ 0.75
LDLRAD3-202ENST00000524419 TRIM52Q96A61 297 aa19.73■□□□□ 0.75
LDLRAD3-202ENST00000524419 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
LDLRAD3-202ENST00000524419 RIMBP3CA6NJZ7 1639 aa19.72■□□□□ 0.75
LDLRAD3-202ENST00000524419 RIMBP3BA6NNM3 1639 aa19.72■□□□□ 0.75
LDLRAD3-202ENST00000524419 RIMBP3Q9UFD9 1639 aa19.72■□□□□ 0.75
LDLRAD3-202ENST00000524419 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
LDLRAD3-202ENST00000524419 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
LDLRAD3-202ENST00000524419 DENND4BO75064 1496 aaPredicted RBP19.7■□□□□ 0.74
LDLRAD3-202ENST00000524419 ADGRL2O95490 1459 aa19.67■□□□□ 0.74
LDLRAD3-202ENST00000524419 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
LDLRAD3-202ENST00000524419 KDM5BQ9UGL1 1544 aa19.65■□□□□ 0.74
LDLRAD3-202ENST00000524419 ZNF777Q9ULD5 760 aaPredicted RBP19.64■□□□□ 0.74
LDLRAD3-202ENST00000524419 SHANK2Q9UPX8 1470 aa19.63■□□□□ 0.73
LDLRAD3-202ENST00000524419 NCOA1Q15788 1441 aa19.62■□□□□ 0.73
LDLRAD3-202ENST00000524419 CLASP1Q7Z460 1538 aa19.61■□□□□ 0.73
LDLRAD3-202ENST00000524419 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
LDLRAD3-202ENST00000524419 ANKRD30AQ9BXX3 1397 aa19.6■□□□□ 0.73
LDLRAD3-202ENST00000524419 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
LDLRAD3-202ENST00000524419 ABCC2Q92887 1545 aa19.59■□□□□ 0.73
LDLRAD3-202ENST00000524419 ARHGEF5Q12774 1597 aa19.58■□□□□ 0.73
LDLRAD3-202ENST00000524419 CDC42BPBQ9Y5S2 1711 aa19.58■□□□□ 0.72
LDLRAD3-202ENST00000524419 C9orf84Q5VXU9 1444 aa19.56■□□□□ 0.72
LDLRAD3-202ENST00000524419 PZPP20742 1482 aa19.55■□□□□ 0.72
LDLRAD3-202ENST00000524419 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
LDLRAD3-202ENST00000524419 CYB5RLQ6IPT4 315 aa19.53■□□□□ 0.72
LDLRAD3-202ENST00000524419 SAMD9LQ8IVG5 1584 aa19.53■□□□□ 0.72
LDLRAD3-202ENST00000524419 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
LDLRAD3-202ENST00000524419 RPRD2Q5VT52 1461 aaKnown RBP19.53■□□□□ 0.72
LDLRAD3-202ENST00000524419 TTC37Q6PGP7 1564 aa19.52■□□□□ 0.72
LDLRAD3-202ENST00000524419 FOXD1Q16676 465 aa19.52■□□□□ 0.71
LDLRAD3-202ENST00000524419 MYO5CQ9NQX4 1742 aa19.51■□□□□ 0.71
LDLRAD3-202ENST00000524419 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
LDLRAD3-202ENST00000524419 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
LDLRAD3-202ENST00000524419 CCDC141Q6ZP82 1450 aa19.49■□□□□ 0.71
LDLRAD3-202ENST00000524419 ZCCHC11Q5TAX3 1644 aaKnown RBP19.49■□□□□ 0.71
LDLRAD3-202ENST00000524419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.48■□□□□ 0.71
LDLRAD3-202ENST00000524419 HIRIP3Q9BW71 556 aaPredicted RBP19.48■□□□□ 0.71
LDLRAD3-202ENST00000524419 TSPY4P0CV99 314 aa19.48■□□□□ 0.71
LDLRAD3-202ENST00000524419 TSPY10P0CW01 314 aa19.48■□□□□ 0.71
LDLRAD3-202ENST00000524419 MBD5Q9P267 1494 aa19.48■□□□□ 0.71
LDLRAD3-202ENST00000524419 UHRF1BP1LA0JNW5 1464 aa19.47■□□□□ 0.71
LDLRAD3-202ENST00000524419 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
LDLRAD3-202ENST00000524419 ARHGAP5Q13017 1502 aa19.47■□□□□ 0.71
LDLRAD3-202ENST00000524419 KIAA1107Q9UPP5 1409 aa19.46■□□□□ 0.71
LDLRAD3-202ENST00000524419 KDM5DQ9BY66 1539 aa19.45■□□□□ 0.7
LDLRAD3-202ENST00000524419 L3MBTL2Q969R5 705 aa19.44■□□□□ 0.7
LDLRAD3-202ENST00000524419 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
LDLRAD3-202ENST00000524419 HNRNPMP52272 730 aaKnown RBP eCLIP19.43■□□□□ 0.7
LDLRAD3-202ENST00000524419 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
LDLRAD3-202ENST00000524419 MAST1Q9Y2H9 1570 aa19.43■□□□□ 0.7
LDLRAD3-202ENST00000524419 RSPH4AQ5TD94 716 aa19.42■□□□□ 0.7
LDLRAD3-202ENST00000524419 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
LDLRAD3-202ENST00000524419 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
LDLRAD3-202ENST00000524419 NUP155O75694 1391 aa19.38■□□□□ 0.69
LDLRAD3-202ENST00000524419 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
LDLRAD3-202ENST00000524419 PKD2Q13563 968 aa19.37■□□□□ 0.69
LDLRAD3-202ENST00000524419 PLXNC1O60486 1568 aa19.37■□□□□ 0.69
LDLRAD3-202ENST00000524419 EIF4G2P78344 907 aaKnown RBP eCLIP19.36■□□□□ 0.696e-6■■■■■ 27.4
LDLRAD3-202ENST00000524419 ANP32CO43423 234 aa19.34■□□□□ 0.69
LDLRAD3-202ENST00000524419 PLCH2O75038 1416 aa19.33■□□□□ 0.68
LDLRAD3-202ENST00000524419 UNC13BO14795 1591 aa19.33■□□□□ 0.68
LDLRAD3-202ENST00000524419 KCNH8Q96L42 1107 aa19.32■□□□□ 0.68
LDLRAD3-202ENST00000524419 POLR1AO95602 1720 aaPredicted RBP19.31■□□□□ 0.68
LDLRAD3-202ENST00000524419 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
LDLRAD3-202ENST00000524419 FAM135AQ9P2D6 1515 aa19.3■□□□□ 0.68
LDLRAD3-202ENST00000524419 CCER2I3L3R5 266 aa19.3■□□□□ 0.68
LDLRAD3-202ENST00000524419 ABCC1P33527 1531 aa19.3■□□□□ 0.68
LDLRAD3-202ENST00000524419 ARAP3Q8WWN8 1544 aa19.28■□□□□ 0.68
LDLRAD3-202ENST00000524419 ARHGEF12Q9NZN5 1544 aa19.27■□□□□ 0.68
LDLRAD3-202ENST00000524419 WASHC2AQ641Q2 1341 aa19.27■□□□□ 0.68
LDLRAD3-202ENST00000524419 DUOX2Q9NRD8 1548 aa19.27■□□□□ 0.68
LDLRAD3-202ENST00000524419 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
LDLRAD3-202ENST00000524419 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
LDLRAD3-202ENST00000524419 WDR7Q9Y4E6 1490 aa19.24■□□□□ 0.67
LDLRAD3-202ENST00000524419 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
LDLRAD3-202ENST00000524419 ERBINQ96RT1 1412 aa19.22■□□□□ 0.67
LDLRAD3-202ENST00000524419 CNTLNQ9NXG0 1405 aa19.22■□□□□ 0.67
LDLRAD3-202ENST00000524419 UHRF1BP1Q6BDS2 1440 aa19.22■□□□□ 0.67
LDLRAD3-202ENST00000524419 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
LDLRAD3-202ENST00000524419 ABCA9Q8IUA7 1624 aa19.19■□□□□ 0.66
LDLRAD3-202ENST00000524419 MAGI2Q86UL8 1455 aa19.19■□□□□ 0.66
LDLRAD3-202ENST00000524419 RALGAPBQ86X10 1494 aa19.19■□□□□ 0.66
LDLRAD3-202ENST00000524419 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
LDLRAD3-202ENST00000524419 KDM5CP41229 1560 aa19.17■□□□□ 0.66
LDLRAD3-202ENST00000524419 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms