RNA–Protein interactions for RNA: ENST00000522841.6

SMG1P3-206, Transcript of SMG1 pseudogene 3, humanhuman

TSL 2 BASIC

Gene SMG1P3, Length 2,774 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-206ENST00000522841 PLB1Q6P1J6 1458 aa22.97■■□□□ 1.27
SMG1P3-206ENST00000522841 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
SMG1P3-206ENST00000522841 CDK11AQ9UQ88 783 aaPredicted RBP22.96■■□□□ 1.27
SMG1P3-206ENST00000522841 ABCC5O15440 1437 aa22.95■■□□□ 1.26
SMG1P3-206ENST00000522841 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
SMG1P3-206ENST00000522841 MAGI1Q96QZ7 1491 aaPredicted RBP22.94■■□□□ 1.26
SMG1P3-206ENST00000522841 ZNF777Q9ULD5 760 aaPredicted RBP22.93■■□□□ 1.26
SMG1P3-206ENST00000522841 SYNJ2O15056 1496 aa22.93■■□□□ 1.26
SMG1P3-206ENST00000522841 HSPA5P11021 654 aaKnown RBP22.93■■□□□ 1.26
SMG1P3-206ENST00000522841 ANP32EQ9BTT0 268 aa22.93■■□□□ 1.26
SMG1P3-206ENST00000522841 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
SMG1P3-206ENST00000522841 DNMT1P26358 1616 aaKnown RBP22.92■■□□□ 1.26
SMG1P3-206ENST00000522841 JPH4Q96JJ6 628 aa22.89■■□□□ 1.25
SMG1P3-206ENST00000522841 CFDP1Q9UEE9 299 aaPredicted RBP22.89■■□□□ 1.25
SMG1P3-206ENST00000522841 TROQ12816 1431 aaPredicted RBP22.88■■□□□ 1.25
SMG1P3-206ENST00000522841 KIF14Q15058 1648 aa22.87■■□□□ 1.25
SMG1P3-206ENST00000522841 BCANQ96GW7 911 aa22.86■■□□□ 1.25
SMG1P3-206ENST00000522841 WASHC2AQ641Q2 1341 aa22.86■■□□□ 1.25
SMG1P3-206ENST00000522841 ROCK1Q13464 1354 aa22.86■■□□□ 1.25
SMG1P3-206ENST00000522841 SLC4A1APQ9BWU0 796 aaKnown RBP22.85■■□□□ 1.25
SMG1P3-206ENST00000522841 TSHZ2Q9NRE2 1034 aa22.85■■□□□ 1.25
SMG1P3-206ENST00000522841 CAMSAP2Q08AD1 1489 aa22.84■■□□□ 1.25
SMG1P3-206ENST00000522841 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
SMG1P3-206ENST00000522841 CARMIL2Q6F5E8 1435 aa22.82■■□□□ 1.24
SMG1P3-206ENST00000522841 FKBP8Q14318 412 aa22.82■■□□□ 1.24
SMG1P3-206ENST00000522841 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
SMG1P3-206ENST00000522841 GPATCH8Q9UKJ3 1502 aaKnown RBP22.81■■□□□ 1.24
SMG1P3-206ENST00000522841 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
SMG1P3-206ENST00000522841 NUP160Q12769 1436 aa22.8■■□□□ 1.24
SMG1P3-206ENST00000522841 C11orf95C9JLR9 678 aaPredicted RBP22.78■■□□□ 1.24
SMG1P3-206ENST00000522841 ITSN2Q9NZM3 1697 aa22.77■■□□□ 1.24
SMG1P3-206ENST00000522841 RPRD2Q5VT52 1461 aaKnown RBP22.75■■□□□ 1.23
SMG1P3-206ENST00000522841 NCOA1Q15788 1441 aa22.73■■□□□ 1.23
SMG1P3-206ENST00000522841 PLEKHD1A6NEE1 506 aa22.73■■□□□ 1.23
SMG1P3-206ENST00000522841 ADCY10Q96PN6 1610 aa22.72■■□□□ 1.23
SMG1P3-206ENST00000522841 PZPP20742 1482 aa22.72■■□□□ 1.23
SMG1P3-206ENST00000522841 TEX14Q8IWB6 1497 aa22.71■■□□□ 1.23
SMG1P3-206ENST00000522841 ADGBQ8N7X0 1667 aa22.71■■□□□ 1.23
SMG1P3-206ENST00000522841 ATP10BO94823 1461 aa22.69■■□□□ 1.22
SMG1P3-206ENST00000522841 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMG1P3-206ENST00000522841 CCDC184Q52MB2 194 aa22.67■■□□□ 1.22
SMG1P3-206ENST00000522841 ABCA8O94911 1581 aa22.67■■□□□ 1.22
SMG1P3-206ENST00000522841 CROCC2H7BZ55 1655 aa22.67■■□□□ 1.22
SMG1P3-206ENST00000522841 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
SMG1P3-206ENST00000522841 ZNF326Q5BKZ1 582 aaKnown RBP22.67■■□□□ 1.22
SMG1P3-206ENST00000522841 CCDC7Q96M83 1385 aa22.65■■□□□ 1.22
SMG1P3-206ENST00000522841 PKD2Q13563 968 aa22.65■■□□□ 1.22
SMG1P3-206ENST00000522841 ANKRD30AQ9BXX3 1397 aa22.65■■□□□ 1.22
SMG1P3-206ENST00000522841 NEFLP07196 543 aa22.65■■□□□ 1.22
SMG1P3-206ENST00000522841 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.21
SMG1P3-206ENST00000522841 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
SMG1P3-206ENST00000522841 ABCC10Q5T3U5 1492 aa22.61■■□□□ 1.21
SMG1P3-206ENST00000522841 ANKRD50Q9ULJ7 1429 aa22.61■■□□□ 1.21
SMG1P3-206ENST00000522841 HNRNPMP52272 730 aaKnown RBP eCLIP22.61■■□□□ 1.212e-6■■□□□ 13.7
SMG1P3-206ENST00000522841 KIAA1107Q9UPP5 1409 aa22.6■■□□□ 1.21
SMG1P3-206ENST00000522841 KIF7Q2M1P5 1343 aa22.58■■□□□ 1.21
SMG1P3-206ENST00000522841 PTPRGP23470 1445 aa22.58■■□□□ 1.21
SMG1P3-206ENST00000522841 C9orf84Q5VXU9 1444 aa22.58■■□□□ 1.21
SMG1P3-206ENST00000522841 PRKRIP1Q9H875 184 aaPredicted RBP22.58■■□□□ 1.2
SMG1P3-206ENST00000522841 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
SMG1P3-206ENST00000522841 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
SMG1P3-206ENST00000522841 NUP155O75694 1391 aa22.56■■□□□ 1.2
SMG1P3-206ENST00000522841 POLR3GLQ9BT43 218 aa22.56■■□□□ 1.2
SMG1P3-206ENST00000522841 TSPY4P0CV99 314 aa22.55■■□□□ 1.2
SMG1P3-206ENST00000522841 TSPY10P0CW01 314 aa22.55■■□□□ 1.2
SMG1P3-206ENST00000522841 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
SMG1P3-206ENST00000522841 CHD1O14646 1710 aa22.52■■□□□ 1.19
SMG1P3-206ENST00000522841 IRX6P78412 446 aaPredicted RBP22.5■■□□□ 1.19
SMG1P3-206ENST00000522841 MRS2Q9HD23 443 aa22.5■■□□□ 1.19
SMG1P3-206ENST00000522841 MBD5Q9P267 1494 aa22.49■■□□□ 1.19
SMG1P3-206ENST00000522841 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
SMG1P3-206ENST00000522841 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
SMG1P3-206ENST00000522841 KDM2AQ9Y2K7 1162 aa22.47■■□□□ 1.19
SMG1P3-206ENST00000522841 USP47Q96K76 1375 aa22.46■■□□□ 1.19
SMG1P3-206ENST00000522841 CDC42BPBQ9Y5S2 1711 aa22.45■■□□□ 1.18
SMG1P3-206ENST00000522841 SAMD9LQ8IVG5 1584 aa22.44■■□□□ 1.18
SMG1P3-206ENST00000522841 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
SMG1P3-206ENST00000522841 BCORL1Q5H9F3 1711 aa22.43■■□□□ 1.18
SMG1P3-206ENST00000522841 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
SMG1P3-206ENST00000522841 PREX2Q70Z35 1606 aa22.39■■□□□ 1.18
SMG1P3-206ENST00000522841 ARHGEF5Q12774 1597 aa22.39■■□□□ 1.17
SMG1P3-206ENST00000522841 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
SMG1P3-206ENST00000522841 TTC37Q6PGP7 1564 aa22.38■■□□□ 1.17
SMG1P3-206ENST00000522841 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
SMG1P3-206ENST00000522841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.37■■□□□ 1.174e-10■■□□□ 11.4
SMG1P3-206ENST00000522841 CARD11Q9BXL7 1154 aa22.37■■□□□ 1.17
SMG1P3-206ENST00000522841 SYCP2Q9BX26 1530 aa22.37■■□□□ 1.17
SMG1P3-206ENST00000522841 KDM5CP41229 1560 aa22.36■■□□□ 1.17
SMG1P3-206ENST00000522841 ARHGAP5Q13017 1502 aa22.36■■□□□ 1.17
SMG1P3-206ENST00000522841 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
SMG1P3-206ENST00000522841 KDM5DQ9BY66 1539 aa22.35■■□□□ 1.17
SMG1P3-206ENST00000522841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.32■■□□□ 1.162e-6■□□□□ 9.7
SMG1P3-206ENST00000522841 FAM135AQ9P2D6 1515 aa22.31■■□□□ 1.16
SMG1P3-206ENST00000522841 UHRF1BP1Q6BDS2 1440 aa22.31■■□□□ 1.16
SMG1P3-206ENST00000522841 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
SMG1P3-206ENST00000522841 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
SMG1P3-206ENST00000522841 ST20-MTHFSA0A0A6YYL1 179 aa22.31■■□□□ 1.16
SMG1P3-206ENST00000522841 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
SMG1P3-206ENST00000522841 RGL3Q3MIN7 710 aa22.3■■□□□ 1.16
SMG1P3-206ENST00000522841 ZBED9Q6R2W3 1325 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms