RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 KIF21BO75037 1637 aa13.69□□□□□ -0.22
VPS13B-210ENST00000521932 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
VPS13B-210ENST00000521932 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
VPS13B-210ENST00000521932 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
VPS13B-210ENST00000521932 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
VPS13B-210ENST00000521932 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
VPS13B-210ENST00000521932 DCAF8Q5TAQ9 597 aa13.62□□□□□ -0.23
VPS13B-210ENST00000521932 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
VPS13B-210ENST00000521932 PELP1Q8IZL8 1130 aaKnown RBP13.61□□□□□ -0.23
VPS13B-210ENST00000521932 IQGAP2Q13576 1575 aa13.61□□□□□ -0.23
VPS13B-210ENST00000521932 UBTFP17480 764 aaKnown RBP13.6□□□□□ -0.23
VPS13B-210ENST00000521932 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
VPS13B-210ENST00000521932 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
VPS13B-210ENST00000521932 CTTNBP2Q8WZ74 1663 aa13.58□□□□□ -0.24
VPS13B-210ENST00000521932 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
VPS13B-210ENST00000521932 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
VPS13B-210ENST00000521932 PYGBP11216 843 aa13.57□□□□□ -0.24
VPS13B-210ENST00000521932 ASTLQ6HA08 431 aaPredicted RBP13.57□□□□□ -0.24
VPS13B-210ENST00000521932 UGGT2Q9NYU1 1516 aa13.57□□□□□ -0.24
VPS13B-210ENST00000521932 PCDHB13Q9Y5F0 798 aa13.56□□□□□ -0.24
VPS13B-210ENST00000521932 LHX8Q68G74 356 aa13.55□□□□□ -0.24
VPS13B-210ENST00000521932 IFNL1Q8IU54 200 aa13.55□□□□□ -0.24
VPS13B-210ENST00000521932 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
VPS13B-210ENST00000521932 LOC105371045A0A1W2PR82 267 aa13.54□□□□□ -0.24
VPS13B-210ENST00000521932 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
VPS13B-210ENST00000521932 RIMBP3CA6NJZ7 1639 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 RIMBP3BA6NNM3 1639 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 RIMBP3Q9UFD9 1639 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 CARMIL2Q6F5E8 1435 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 DISP1Q96F81 1524 aa13.53□□□□□ -0.24
VPS13B-210ENST00000521932 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
VPS13B-210ENST00000521932 ATN1P54259 1190 aaPredicted RBP13.51□□□□□ -0.25
VPS13B-210ENST00000521932 GSE1Q14687 1217 aa13.5□□□□□ -0.25
VPS13B-210ENST00000521932 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
VPS13B-210ENST00000521932 KIAA0556O60303 1618 aa13.47□□□□□ -0.25
VPS13B-210ENST00000521932 TIE1P35590 1138 aa13.47□□□□□ -0.25
VPS13B-210ENST00000521932 CYB5RLQ6IPT4 315 aa13.47□□□□□ -0.25
VPS13B-210ENST00000521932 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
VPS13B-210ENST00000521932 TTLL13PA6NNM8 815 aa13.46□□□□□ -0.25
VPS13B-210ENST00000521932 AMER1Q5JTC6 1135 aaPredicted RBP13.46□□□□□ -0.25
VPS13B-210ENST00000521932 PTPRGP23470 1445 aa13.46□□□□□ -0.26
VPS13B-210ENST00000521932 RANGAP1P46060 587 aaPredicted RBP13.45□□□□□ -0.26
VPS13B-210ENST00000521932 PCDHB8Q9UN66 801 aa13.45□□□□□ -0.26
VPS13B-210ENST00000521932 EFCAB5A4FU69 1503 aa13.44□□□□□ -0.26
VPS13B-210ENST00000521932 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
VPS13B-210ENST00000521932 P3H3Q8IVL6 736 aa13.43□□□□□ -0.26
VPS13B-210ENST00000521932 CIZ1Q9ULV3 898 aaPredicted RBP13.43□□□□□ -0.26
VPS13B-210ENST00000521932 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
VPS13B-210ENST00000521932 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
VPS13B-210ENST00000521932 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
VPS13B-210ENST00000521932 CLIP1P30622 1438 aa13.4□□□□□ -0.26
VPS13B-210ENST00000521932 METRNQ9UJH8 293 aa13.4□□□□□ -0.26
VPS13B-210ENST00000521932 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
VPS13B-210ENST00000521932 CEP162Q5TB80 1403 aa13.39□□□□□ -0.27
VPS13B-210ENST00000521932 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
VPS13B-210ENST00000521932 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
VPS13B-210ENST00000521932 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
VPS13B-210ENST00000521932 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
VPS13B-210ENST00000521932 TMEM106CQ9BVX2 250 aa13.36□□□□□ -0.27
VPS13B-210ENST00000521932 UHRF1BP1LA0JNW5 1464 aa13.36□□□□□ -0.27
VPS13B-210ENST00000521932 C7P10643 843 aa13.35□□□□□ -0.27
VPS13B-210ENST00000521932 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
VPS13B-210ENST00000521932 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
VPS13B-210ENST00000521932 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
VPS13B-210ENST00000521932 ABCA8O94911 1581 aa13.32□□□□□ -0.28
VPS13B-210ENST00000521932 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
VPS13B-210ENST00000521932 ADCY10Q96PN6 1610 aa13.31□□□□□ -0.28
VPS13B-210ENST00000521932 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
VPS13B-210ENST00000521932 ZNF467Q7Z7K2 595 aaPredicted RBP13.3□□□□□ -0.28
VPS13B-210ENST00000521932 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
VPS13B-210ENST00000521932 COLQQ9Y215 455 aaPredicted RBP13.29□□□□□ -0.28
VPS13B-210ENST00000521932 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
VPS13B-210ENST00000521932 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
VPS13B-210ENST00000521932 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
VPS13B-210ENST00000521932 ATP10BO94823 1461 aa13.25□□□□□ -0.29
VPS13B-210ENST00000521932 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
VPS13B-210ENST00000521932 OTUD5Q96G74 571 aa13.24□□□□□ -0.29
VPS13B-210ENST00000521932 PSEN1P49768 467 aa13.23□□□□□ -0.29
VPS13B-210ENST00000521932 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
VPS13B-210ENST00000521932 IER5LQ5T953 404 aa13.22□□□□□ -0.29
VPS13B-210ENST00000521932 MAPKBP1O60336 1514 aa13.22□□□□□ -0.29
VPS13B-210ENST00000521932 FYCO1Q9BQS8 1478 aa13.22□□□□□ -0.29
VPS13B-210ENST00000521932 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
VPS13B-210ENST00000521932 ZCCHC11Q5TAX3 1644 aaKnown RBP13.21□□□□□ -0.3
VPS13B-210ENST00000521932 HECW1Q76N89 1606 aa13.21□□□□□ -0.3
VPS13B-210ENST00000521932 EPRSP07814 1512 aaKnown RBP13.2□□□□□ -0.3
VPS13B-210ENST00000521932 PCF11O94913 1555 aaKnown RBP13.2□□□□□ -0.3
VPS13B-210ENST00000521932 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
VPS13B-210ENST00000521932 PDAP1Q13442 181 aaKnown RBP13.19□□□□□ -0.3
VPS13B-210ENST00000521932 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
VPS13B-210ENST00000521932 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
VPS13B-210ENST00000521932 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
VPS13B-210ENST00000521932 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
VPS13B-210ENST00000521932 PKD2Q13563 968 aa13.16□□□□□ -0.3
VPS13B-210ENST00000521932 CDK11AQ9UQ88 783 aaPredicted RBP13.16□□□□□ -0.3
VPS13B-210ENST00000521932 CDK13Q14004 1512 aaKnown RBP13.15□□□□□ -0.3
VPS13B-210ENST00000521932 SEC24BO95487 1268 aa13.15□□□□□ -0.3
VPS13B-210ENST00000521932 ABCC10Q5T3U5 1492 aa13.15□□□□□ -0.3
VPS13B-210ENST00000521932 WDR7Q9Y4E6 1490 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms