RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 CFAP74Q9C0B2 1584 aa13.59□□□□□ -0.23
HMBOX1-208ENST00000521516 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
HMBOX1-208ENST00000521516 HSPA1LP34931 641 aa13.59□□□□□ -0.23
HMBOX1-208ENST00000521516 ATP10AO60312 1499 aa13.58□□□□□ -0.24
HMBOX1-208ENST00000521516 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
HMBOX1-208ENST00000521516 C9orf84Q5VXU9 1444 aa13.57□□□□□ -0.24
HMBOX1-208ENST00000521516 SUPT5HO00267 1087 aaKnown RBP13.56□□□□□ -0.24
HMBOX1-208ENST00000521516 ZNF335Q9H4Z2 1342 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-208ENST00000521516 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-208ENST00000521516 TRAPPC8Q9Y2L5 1435 aa13.53□□□□□ -0.24
HMBOX1-208ENST00000521516 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
HMBOX1-208ENST00000521516 C3P01024 1663 aa13.51□□□□□ -0.25
HMBOX1-208ENST00000521516 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
HMBOX1-208ENST00000521516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■□□□ 13.7
HMBOX1-208ENST00000521516 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
HMBOX1-208ENST00000521516 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
HMBOX1-208ENST00000521516 NUP153P49790 1475 aaKnown RBP13.46□□□□□ -0.25
HMBOX1-208ENST00000521516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.45□□□□□ -0.26
HMBOX1-208ENST00000521516 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
HMBOX1-208ENST00000521516 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
HMBOX1-208ENST00000521516 TOM1O60784 492 aa13.44□□□□□ -0.26
HMBOX1-208ENST00000521516 PIP4K2BP78356 416 aa13.44□□□□□ -0.26
HMBOX1-208ENST00000521516 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
HMBOX1-208ENST00000521516 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
HMBOX1-208ENST00000521516 RGS17Q9UGC6 210 aaPredicted RBP13.44□□□□□ -0.26
HMBOX1-208ENST00000521516 PLA2R1Q13018 1463 aa13.43□□□□□ -0.26
HMBOX1-208ENST00000521516 PKD2Q13563 968 aa13.43□□□□□ -0.26
HMBOX1-208ENST00000521516 PLEKHD1A6NEE1 506 aa13.43□□□□□ -0.26
HMBOX1-208ENST00000521516 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
HMBOX1-208ENST00000521516 NPATQ14207 1427 aa13.42□□□□□ -0.26
HMBOX1-208ENST00000521516 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
HMBOX1-208ENST00000521516 AGLP35573 1532 aa13.42□□□□□ -0.26
HMBOX1-208ENST00000521516 PLCH2O75038 1416 aa13.41□□□□□ -0.26
HMBOX1-208ENST00000521516 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
HMBOX1-208ENST00000521516 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
HMBOX1-208ENST00000521516 KDM5CP41229 1560 aa13.38□□□□□ -0.27
HMBOX1-208ENST00000521516 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
HMBOX1-208ENST00000521516 CPS1P31327 1500 aa13.38□□□□□ -0.27
HMBOX1-208ENST00000521516 ALKQ9UM73 1620 aa13.38□□□□□ -0.27
HMBOX1-208ENST00000521516 ZNF518AQ6AHZ1 1483 aa13.37□□□□□ -0.27
HMBOX1-208ENST00000521516 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
HMBOX1-208ENST00000521516 ESF1Q9H501 851 aaKnown RBP13.36□□□□□ -0.27
HMBOX1-208ENST00000521516 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
HMBOX1-208ENST00000521516 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
HMBOX1-208ENST00000521516 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
HMBOX1-208ENST00000521516 MROH2AA6NES4 1674 aa13.33□□□□□ -0.28
HMBOX1-208ENST00000521516 EFCAB2Q5VUJ9 269 aa13.33□□□□□ -0.28
HMBOX1-208ENST00000521516 ABCA6Q8N139 1617 aa13.32□□□□□ -0.28
HMBOX1-208ENST00000521516 AFAP1Q8N556 730 aa13.32□□□□□ -0.28
HMBOX1-208ENST00000521516 MLH3Q9UHC1 1453 aa13.31□□□□□ -0.28
HMBOX1-208ENST00000521516 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
HMBOX1-208ENST00000521516 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
HMBOX1-208ENST00000521516 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
HMBOX1-208ENST00000521516 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
HMBOX1-208ENST00000521516 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
HMBOX1-208ENST00000521516 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
HMBOX1-208ENST00000521516 MYO5CQ9NQX4 1742 aa13.26□□□□□ -0.29
HMBOX1-208ENST00000521516 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
HMBOX1-208ENST00000521516 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
HMBOX1-208ENST00000521516 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
HMBOX1-208ENST00000521516 SRCAPQ6ZRS2 3230 aa13.22□□□□□ -0.29
HMBOX1-208ENST00000521516 A2ML1A8K2U0 1454 aa13.22□□□□□ -0.29
HMBOX1-208ENST00000521516 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.29
HMBOX1-208ENST00000521516 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
HMBOX1-208ENST00000521516 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.3
HMBOX1-208ENST00000521516 POLR1AO95602 1720 aaPredicted RBP13.2□□□□□ -0.3
HMBOX1-208ENST00000521516 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
HMBOX1-208ENST00000521516 ARHGAP5Q13017 1502 aa13.19□□□□□ -0.3
HMBOX1-208ENST00000521516 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
HMBOX1-208ENST00000521516 RNF17Q9BXT8 1623 aaKnown RBP13.18□□□□□ -0.3
HMBOX1-208ENST00000521516 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMBOX1-208ENST00000521516 CLTCQ00610 1675 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-208ENST00000521516 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
HMBOX1-208ENST00000521516 ABCC1P33527 1531 aa13.15□□□□□ -0.3
HMBOX1-208ENST00000521516 KIF14Q15058 1648 aa13.15□□□□□ -0.3
HMBOX1-208ENST00000521516 MED14O60244 1454 aa13.15□□□□□ -0.3
HMBOX1-208ENST00000521516 SYNMO15061 1565 aa13.13□□□□□ -0.31
HMBOX1-208ENST00000521516 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
HMBOX1-208ENST00000521516 STRCP1A6NGW2 1772 aa13.11□□□□□ -0.31
HMBOX1-208ENST00000521516 ANKLE2Q86XL3 938 aa13.11□□□□□ -0.31
HMBOX1-208ENST00000521516 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
HMBOX1-208ENST00000521516 DEPDC5O75140 1603 aa13.11□□□□□ -0.31
HMBOX1-208ENST00000521516 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
HMBOX1-208ENST00000521516 PLXNC1O60486 1568 aa13.1□□□□□ -0.31
HMBOX1-208ENST00000521516 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
HMBOX1-208ENST00000521516 FAM135BQ49AJ0 1406 aa13.09□□□□□ -0.31
HMBOX1-208ENST00000521516 CDK11AQ9UQ88 783 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-208ENST00000521516 SAMD9LQ8IVG5 1584 aa13.08□□□□□ -0.32
HMBOX1-208ENST00000521516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
HMBOX1-208ENST00000521516 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
HMBOX1-208ENST00000521516 TNRQ92752 1358 aa13.06□□□□□ -0.32
HMBOX1-208ENST00000521516 IQGAP1P46940 1657 aa13.06□□□□□ -0.32
HMBOX1-208ENST00000521516 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
HMBOX1-208ENST00000521516 THEMISQ8N1K5 641 aaPredicted RBP13.04□□□□□ -0.32
HMBOX1-208ENST00000521516 CLIP1P30622 1438 aa13.04□□□□□ -0.32
HMBOX1-208ENST00000521516 A2MP01023 1474 aa13.04□□□□□ -0.32
HMBOX1-208ENST00000521516 GGT6Q6P531 493 aa13.03□□□□□ -0.32
HMBOX1-208ENST00000521516 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.33
HMBOX1-208ENST00000521516 ATP7AQ04656 1500 aa13□□□□□ -0.33
HMBOX1-208ENST00000521516 NLRP1Q9C000 1473 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms