RNA–Protein interactions for RNA: ENST00000521017.5

CCNC-211, Transcript of cyclin C, humanhuman

TSL 4

Gene CCNC, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-211ENST00000521017 RAPGEF6Q8TEU7 1601 aa17.94■□□□□ 0.46
CCNC-211ENST00000521017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCNC-211ENST00000521017 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
CCNC-211ENST00000521017 HECW1Q76N89 1606 aa17.94■□□□□ 0.46
CCNC-211ENST00000521017 SCAPERQ9BY12 1400 aa17.93■□□□□ 0.46
CCNC-211ENST00000521017 LTBP4Q8N2S1 1624 aa17.91■□□□□ 0.46
CCNC-211ENST00000521017 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
CCNC-211ENST00000521017 EFCAB5A4FU69 1503 aa17.9■□□□□ 0.46
CCNC-211ENST00000521017 SAMD9Q5K651 1589 aa17.9■□□□□ 0.46
CCNC-211ENST00000521017 ATP10AO60312 1499 aa17.89■□□□□ 0.45
CCNC-211ENST00000521017 FER1L4A9Z1Z3 1794 aa17.89■□□□□ 0.45
CCNC-211ENST00000521017 PTPRTO14522 1441 aa17.89■□□□□ 0.45
CCNC-211ENST00000521017 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
CCNC-211ENST00000521017 C9orf84Q5VXU9 1444 aa17.85■□□□□ 0.45
CCNC-211ENST00000521017 AFAP1Q8N556 730 aa17.85■□□□□ 0.45
CCNC-211ENST00000521017 PREX1Q8TCU6 1659 aa17.85■□□□□ 0.45
CCNC-211ENST00000521017 PLCH2O75038 1416 aa17.84■□□□□ 0.45
CCNC-211ENST00000521017 ZNF335Q9H4Z2 1342 aaPredicted RBP17.8■□□□□ 0.44
CCNC-211ENST00000521017 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
CCNC-211ENST00000521017 UBAP1LF5GYI3 381 aa17.79■□□□□ 0.44
CCNC-211ENST00000521017 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
CCNC-211ENST00000521017 NCOA1Q15788 1441 aa17.78■□□□□ 0.44
CCNC-211ENST00000521017 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
CCNC-211ENST00000521017 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
CCNC-211ENST00000521017 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
CCNC-211ENST00000521017 IQSEC2Q5JU85 1478 aa17.75■□□□□ 0.43
CCNC-211ENST00000521017 TRAPPC8Q9Y2L5 1435 aa17.74■□□□□ 0.43
CCNC-211ENST00000521017 SETD1BQ9UPS6 1966 aaKnown RBP17.72■□□□□ 0.43
CCNC-211ENST00000521017 HSPA1LP34931 641 aa17.71■□□□□ 0.43
CCNC-211ENST00000521017 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
CCNC-211ENST00000521017 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
CCNC-211ENST00000521017 C3P01024 1663 aa17.67■□□□□ 0.42
CCNC-211ENST00000521017 ZNF518AQ6AHZ1 1483 aa17.67■□□□□ 0.42
CCNC-211ENST00000521017 KDM5CP41229 1560 aa17.66■□□□□ 0.42
CCNC-211ENST00000521017 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
CCNC-211ENST00000521017 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
CCNC-211ENST00000521017 PIP4K2BP78356 416 aa17.63■□□□□ 0.41
CCNC-211ENST00000521017 ESF1Q9H501 851 aaKnown RBP17.63■□□□□ 0.41
CCNC-211ENST00000521017 MLH3Q9UHC1 1453 aa17.62■□□□□ 0.41
CCNC-211ENST00000521017 ABCA6Q8N139 1617 aa17.61■□□□□ 0.41
CCNC-211ENST00000521017 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
CCNC-211ENST00000521017 AGLP35573 1532 aa17.61■□□□□ 0.41
CCNC-211ENST00000521017 KIF14Q15058 1648 aa17.61■□□□□ 0.41
CCNC-211ENST00000521017 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
CCNC-211ENST00000521017 REREQ9P2R6 1566 aa17.6■□□□□ 0.41
CCNC-211ENST00000521017 SCAF1Q9H7N4 1312 aaKnown RBP17.59■□□□□ 0.41
CCNC-211ENST00000521017 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.41
CCNC-211ENST00000521017 PKD2Q13563 968 aa17.56■□□□□ 0.4
CCNC-211ENST00000521017 NPATQ14207 1427 aa17.55■□□□□ 0.4
CCNC-211ENST00000521017 EHMT2Q96KQ7 1210 aa17.55■□□□□ 0.4
CCNC-211ENST00000521017 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
CCNC-211ENST00000521017 TROQ12816 1431 aaPredicted RBP17.55■□□□□ 0.4
CCNC-211ENST00000521017 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
CCNC-211ENST00000521017 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CCNC-211ENST00000521017 MYO5CQ9NQX4 1742 aa17.52■□□□□ 0.4
CCNC-211ENST00000521017 CDK11AQ9UQ88 783 aaPredicted RBP17.52■□□□□ 0.4
CCNC-211ENST00000521017 PTPRKQ15262 1439 aa17.51■□□□□ 0.39
CCNC-211ENST00000521017 PLA2R1Q13018 1463 aa17.5■□□□□ 0.39
CCNC-211ENST00000521017 RGS17Q9UGC6 210 aaPredicted RBP17.5■□□□□ 0.39
CCNC-211ENST00000521017 TOM1O60784 492 aa17.48■□□□□ 0.39
CCNC-211ENST00000521017 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
CCNC-211ENST00000521017 ABCC1P33527 1531 aa17.47■□□□□ 0.39
CCNC-211ENST00000521017 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
CCNC-211ENST00000521017 ARHGAP35Q9NRY4 1499 aa17.46■□□□□ 0.39
CCNC-211ENST00000521017 HNRNPMP52272 730 aaKnown RBP eCLIP17.45■□□□□ 0.388e-10■■■■□ 20.8
CCNC-211ENST00000521017 CDC42BPBQ9Y5S2 1711 aa17.44■□□□□ 0.38
CCNC-211ENST00000521017 GGT6Q6P531 493 aa17.44■□□□□ 0.38
CCNC-211ENST00000521017 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
CCNC-211ENST00000521017 FMN1Q68DA7 1419 aa17.43■□□□□ 0.38
CCNC-211ENST00000521017 CEP170BQ9Y4F5 1589 aaPredicted RBP17.43■□□□□ 0.38
CCNC-211ENST00000521017 FOXD1Q16676 465 aa17.42■□□□□ 0.38
CCNC-211ENST00000521017 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
CCNC-211ENST00000521017 SPAG9O60271 1321 aaKnown RBP17.42■□□□□ 0.38
CCNC-211ENST00000521017 CLIP1P30622 1438 aa17.41■□□□□ 0.38
CCNC-211ENST00000521017 MYO3AQ8NEV4 1616 aa17.41■□□□□ 0.38
CCNC-211ENST00000521017 SHANK2Q9UPX8 1470 aa17.41■□□□□ 0.38
CCNC-211ENST00000521017 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
CCNC-211ENST00000521017 EEA1Q15075 1411 aa17.39■□□□□ 0.38
CCNC-211ENST00000521017 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
CCNC-211ENST00000521017 MROH2AA6NES4 1674 aa17.38■□□□□ 0.37
CCNC-211ENST00000521017 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
CCNC-211ENST00000521017 ZNF142P52746 1687 aaPredicted RBP17.37■□□□□ 0.37
CCNC-211ENST00000521017 A2ML1A8K2U0 1454 aa17.37■□□□□ 0.37
CCNC-211ENST00000521017 NEURL4Q96JN8 1562 aa17.36■□□□□ 0.37
CCNC-211ENST00000521017 CLTCQ00610 1675 aaKnown RBP17.36■□□□□ 0.37
CCNC-211ENST00000521017 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
CCNC-211ENST00000521017 LRRIQ1Q96JM4 1722 aa17.35■□□□□ 0.37
CCNC-211ENST00000521017 CPS1P31327 1500 aa17.35■□□□□ 0.37
CCNC-211ENST00000521017 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
CCNC-211ENST00000521017 A2MP01023 1474 aa17.34■□□□□ 0.37
CCNC-211ENST00000521017 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
CCNC-211ENST00000521017 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.37
CCNC-211ENST00000521017 SYCP2Q9BX26 1530 aa17.33■□□□□ 0.37
CCNC-211ENST00000521017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCNC-211ENST00000521017 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
CCNC-211ENST00000521017 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
CCNC-211ENST00000521017 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CCNC-211ENST00000521017 TNRQ92752 1358 aa17.29■□□□□ 0.36
CCNC-211ENST00000521017 ZNF644Q9H582 1327 aaPredicted RBP17.29■□□□□ 0.36
CCNC-211ENST00000521017 ANKLE2Q86XL3 938 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms