RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 YEATS2Q9ULM3 1422 aa19.02■□□□□ 0.64
MRPS28-206ENST00000520946 TTC37Q6PGP7 1564 aa19.02■□□□□ 0.63
MRPS28-206ENST00000520946 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
MRPS28-206ENST00000520946 ZMYM4Q5VZL5 1548 aa19■□□□□ 0.63
MRPS28-206ENST00000520946 PLCH2O75038 1416 aa19■□□□□ 0.63
MRPS28-206ENST00000520946 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
MRPS28-206ENST00000520946 CERKQ8TCT0 537 aa18.97■□□□□ 0.63
MRPS28-206ENST00000520946 FMN1Q68DA7 1419 aa18.97■□□□□ 0.63
MRPS28-206ENST00000520946 ESF1Q9H501 851 aaKnown RBP18.96■□□□□ 0.63
MRPS28-206ENST00000520946 ATP10AO60312 1499 aa18.96■□□□□ 0.63
MRPS28-206ENST00000520946 FER1L4A9Z1Z3 1794 aa18.93■□□□□ 0.62
MRPS28-206ENST00000520946 C9orf84Q5VXU9 1444 aa18.93■□□□□ 0.62
MRPS28-206ENST00000520946 DMRT2Q9Y5R5 561 aa18.93■□□□□ 0.62
MRPS28-206ENST00000520946 CLIP1P30622 1438 aa18.92■□□□□ 0.62
MRPS28-206ENST00000520946 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
MRPS28-206ENST00000520946 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
MRPS28-206ENST00000520946 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
MRPS28-206ENST00000520946 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
MRPS28-206ENST00000520946 ZNF518AQ6AHZ1 1483 aa18.88■□□□□ 0.61
MRPS28-206ENST00000520946 SIGLEC1Q9BZZ2 1709 aa18.86■□□□□ 0.61
MRPS28-206ENST00000520946 KIF14Q15058 1648 aa18.86■□□□□ 0.61
MRPS28-206ENST00000520946 TROQ12816 1431 aaPredicted RBP18.85■□□□□ 0.61
MRPS28-206ENST00000520946 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
MRPS28-206ENST00000520946 UHRF1BP1Q6BDS2 1440 aa18.84■□□□□ 0.61
MRPS28-206ENST00000520946 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
MRPS28-206ENST00000520946 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
MRPS28-206ENST00000520946 ZNF777Q9ULD5 760 aaPredicted RBP18.77■□□□□ 0.6
MRPS28-206ENST00000520946 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
MRPS28-206ENST00000520946 DISP3Q9P2K9 1392 aa18.75■□□□□ 0.59
MRPS28-206ENST00000520946 KDM5CP41229 1560 aa18.74■□□□□ 0.59
MRPS28-206ENST00000520946 CCDC18Q5T9S5 1454 aa18.72■□□□□ 0.59
MRPS28-206ENST00000520946 MLH3Q9UHC1 1453 aa18.72■□□□□ 0.59
MRPS28-206ENST00000520946 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
MRPS28-206ENST00000520946 DIP2CQ9Y2E4 1556 aa18.72■□□□□ 0.59
MRPS28-206ENST00000520946 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.59
MRPS28-206ENST00000520946 CDC42BPBQ9Y5S2 1711 aa18.69■□□□□ 0.58
MRPS28-206ENST00000520946 CASKIN1Q8WXD9 1431 aa18.68■□□□□ 0.58
MRPS28-206ENST00000520946 CNTLNQ9NXG0 1405 aa18.68■□□□□ 0.58
MRPS28-206ENST00000520946 REREQ9P2R6 1566 aa18.68■□□□□ 0.58
MRPS28-206ENST00000520946 ABCA6Q8N139 1617 aa18.67■□□□□ 0.58
MRPS28-206ENST00000520946 PTPRTO14522 1441 aa18.67■□□□□ 0.58
MRPS28-206ENST00000520946 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
MRPS28-206ENST00000520946 SPAG9O60271 1321 aaKnown RBP18.67■□□□□ 0.58
MRPS28-206ENST00000520946 ABCC1P33527 1531 aa18.66■□□□□ 0.58
MRPS28-206ENST00000520946 AGLP35573 1532 aa18.66■□□□□ 0.58
MRPS28-206ENST00000520946 PREX2Q70Z35 1606 aa18.66■□□□□ 0.58
MRPS28-206ENST00000520946 C3P01024 1663 aa18.66■□□□□ 0.58
MRPS28-206ENST00000520946 HNRNPMP52272 730 aaKnown RBP eCLIP18.64■□□□□ 0.57
MRPS28-206ENST00000520946 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
MRPS28-206ENST00000520946 CFDP1Q9UEE9 299 aaPredicted RBP18.63■□□□□ 0.57
MRPS28-206ENST00000520946 ITSN2Q9NZM3 1697 aa18.63■□□□□ 0.57
MRPS28-206ENST00000520946 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
MRPS28-206ENST00000520946 GGT6Q6P531 493 aa18.6■□□□□ 0.57
MRPS28-206ENST00000520946 ILDR2Q71H61 639 aa18.59■□□□□ 0.57
MRPS28-206ENST00000520946 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.57
MRPS28-206ENST00000520946 CCNB3Q8WWL7 1395 aa18.58■□□□□ 0.57
MRPS28-206ENST00000520946 SOCS7O14512 581 aa18.58■□□□□ 0.56
MRPS28-206ENST00000520946 FYCO1Q9BQS8 1478 aa18.58■□□□□ 0.56
MRPS28-206ENST00000520946 NPATQ14207 1427 aa18.57■□□□□ 0.56
MRPS28-206ENST00000520946 NCOA1Q15788 1441 aa18.57■□□□□ 0.56
MRPS28-206ENST00000520946 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
MRPS28-206ENST00000520946 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
MRPS28-206ENST00000520946 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
MRPS28-206ENST00000520946 SYCP2Q9BX26 1530 aa18.55■□□□□ 0.56
MRPS28-206ENST00000520946 PLEKHH2Q8IVE3 1493 aa18.55■□□□□ 0.56
MRPS28-206ENST00000520946 CAMSAP1Q5T5Y3 1602 aa18.55■□□□□ 0.56
MRPS28-206ENST00000520946 MTUS2Q5JR59 1369 aa18.55■□□□□ 0.56
MRPS28-206ENST00000520946 SUPT6HQ7KZ85 1726 aaKnown RBP18.54■□□□□ 0.56
MRPS28-206ENST00000520946 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
MRPS28-206ENST00000520946 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
MRPS28-206ENST00000520946 PKD2Q13563 968 aa18.54■□□□□ 0.56
MRPS28-206ENST00000520946 A2MP01023 1474 aa18.52■□□□□ 0.55
MRPS28-206ENST00000520946 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
MRPS28-206ENST00000520946 KIAA1107Q9UPP5 1409 aa18.51■□□□□ 0.55
MRPS28-206ENST00000520946 ATP7AQ04656 1500 aa18.51■□□□□ 0.55
MRPS28-206ENST00000520946 PPP6R1Q9UPN7 881 aa18.51■□□□□ 0.55
MRPS28-206ENST00000520946 MROH2AA6NES4 1674 aa18.5■□□□□ 0.55
MRPS28-206ENST00000520946 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
MRPS28-206ENST00000520946 LTBP4Q8N2S1 1624 aa18.5■□□□□ 0.55
MRPS28-206ENST00000520946 SPATA31D1Q6ZQQ2 1576 aa18.5■□□□□ 0.55
MRPS28-206ENST00000520946 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
MRPS28-206ENST00000520946 CLTCQ00610 1675 aaKnown RBP18.47■□□□□ 0.55
MRPS28-206ENST00000520946 PTPRKQ15262 1439 aa18.44■□□□□ 0.54
MRPS28-206ENST00000520946 ZNF644Q9H582 1327 aaPredicted RBP18.44■□□□□ 0.54
MRPS28-206ENST00000520946 PLA2R1Q13018 1463 aa18.43■□□□□ 0.54
MRPS28-206ENST00000520946 KIF3BO15066 747 aa18.42■□□□□ 0.54
MRPS28-206ENST00000520946 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-206ENST00000520946 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
MRPS28-206ENST00000520946 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
MRPS28-206ENST00000520946 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
MRPS28-206ENST00000520946 PLXNC1O60486 1568 aa18.39■□□□□ 0.53
MRPS28-206ENST00000520946 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.53
MRPS28-206ENST00000520946 WASHC2CQ9Y4E1 1318 aa18.39■□□□□ 0.53
MRPS28-206ENST00000520946 TOM1O60784 492 aa18.38■□□□□ 0.53
MRPS28-206ENST00000520946 DHX29Q7Z478 1369 aaKnown RBP18.38■□□□□ 0.53
MRPS28-206ENST00000520946 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
MRPS28-206ENST00000520946 RSPH4AQ5TD94 716 aa18.37■□□□□ 0.53
MRPS28-206ENST00000520946 ANKLE2Q86XL3 938 aa18.37■□□□□ 0.53
MRPS28-206ENST00000520946 A2ML1A8K2U0 1454 aa18.37■□□□□ 0.53
MRPS28-206ENST00000520946 RTEL1-TNFRSF6BF6WH68 1400 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms