RNA–Protein interactions for RNA: ENST00000520178.3

CNOT7-208, Transcript of CCR4-NOT transcription complex subunit 7, humanhuman

TSL 5

Gene CNOT7, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT7-208ENST00000520178 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
CNOT7-208ENST00000520178 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
CNOT7-208ENST00000520178 IQSEC2Q5JU85 1478 aa18.65■□□□□ 0.58
CNOT7-208ENST00000520178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
CNOT7-208ENST00000520178 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
CNOT7-208ENST00000520178 ATP10AO60312 1499 aa18.63■□□□□ 0.57
CNOT7-208ENST00000520178 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
CNOT7-208ENST00000520178 PTPRTO14522 1441 aa18.62■□□□□ 0.57
CNOT7-208ENST00000520178 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
CNOT7-208ENST00000520178 C3P01024 1663 aa18.61■□□□□ 0.57
CNOT7-208ENST00000520178 LTBP4Q8N2S1 1624 aa18.61■□□□□ 0.57
CNOT7-208ENST00000520178 PLEKHD1A6NEE1 506 aa18.61■□□□□ 0.57
CNOT7-208ENST00000520178 UHRF1BP1Q6BDS2 1440 aa18.6■□□□□ 0.57
CNOT7-208ENST00000520178 MLECQ14165 292 aa18.6■□□□□ 0.57
CNOT7-208ENST00000520178 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
CNOT7-208ENST00000520178 REREQ9P2R6 1566 aa18.56■□□□□ 0.56
CNOT7-208ENST00000520178 PLCH2O75038 1416 aa18.56■□□□□ 0.56
CNOT7-208ENST00000520178 KDM5CP41229 1560 aa18.55■□□□□ 0.56
CNOT7-208ENST00000520178 CEBPAP49715 358 aaPredicted RBP18.52■□□□□ 0.56
CNOT7-208ENST00000520178 ZNF518AQ6AHZ1 1483 aa18.51■□□□□ 0.55
CNOT7-208ENST00000520178 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
CNOT7-208ENST00000520178 CDK13Q14004 1512 aaKnown RBP18.48■□□□□ 0.55
CNOT7-208ENST00000520178 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
CNOT7-208ENST00000520178 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
CNOT7-208ENST00000520178 AGLP35573 1532 aa18.46■□□□□ 0.55
CNOT7-208ENST00000520178 MROH2AA6NES4 1674 aa18.45■□□□□ 0.54
CNOT7-208ENST00000520178 SUPT6HQ7KZ85 1726 aaKnown RBP18.44■□□□□ 0.54
CNOT7-208ENST00000520178 TRAPPC8Q9Y2L5 1435 aa18.43■□□□□ 0.54
CNOT7-208ENST00000520178 EFCAB2Q5VUJ9 269 aa18.43■□□□□ 0.54
CNOT7-208ENST00000520178 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CNOT7-208ENST00000520178 KIF14Q15058 1648 aa18.42■□□□□ 0.54
CNOT7-208ENST00000520178 CSRNP3Q8WYN3 585 aa18.41■□□□□ 0.54
CNOT7-208ENST00000520178 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
CNOT7-208ENST00000520178 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
CNOT7-208ENST00000520178 CAMSAP1Q5T5Y3 1602 aa18.4■□□□□ 0.54
CNOT7-208ENST00000520178 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
CNOT7-208ENST00000520178 ARHGAP5Q13017 1502 aa18.38■□□□□ 0.53
CNOT7-208ENST00000520178 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
CNOT7-208ENST00000520178 KIDINS220Q9ULH0 1771 aa18.37■□□□□ 0.53
CNOT7-208ENST00000520178 NPATQ14207 1427 aa18.36■□□□□ 0.53
CNOT7-208ENST00000520178 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
CNOT7-208ENST00000520178 PREX2Q70Z35 1606 aa18.34■□□□□ 0.53
CNOT7-208ENST00000520178 EEA1Q15075 1411 aa18.33■□□□□ 0.53
CNOT7-208ENST00000520178 AFAP1Q8N556 730 aa18.33■□□□□ 0.52
CNOT7-208ENST00000520178 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.52
CNOT7-208ENST00000520178 MYO3AQ8NEV4 1616 aa18.32■□□□□ 0.52
CNOT7-208ENST00000520178 ABCC1P33527 1531 aa18.32■□□□□ 0.52
CNOT7-208ENST00000520178 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
CNOT7-208ENST00000520178 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
CNOT7-208ENST00000520178 PLA2R1Q13018 1463 aa18.31■□□□□ 0.52
CNOT7-208ENST00000520178 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
CNOT7-208ENST00000520178 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
CNOT7-208ENST00000520178 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
CNOT7-208ENST00000520178 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
CNOT7-208ENST00000520178 CDC42BPAQ5VT25 1732 aa18.28■□□□□ 0.52
CNOT7-208ENST00000520178 TCOF1Q13428 1488 aaKnown RBP18.27■□□□□ 0.52
CNOT7-208ENST00000520178 CEP170BQ9Y4F5 1589 aaPredicted RBP18.27■□□□□ 0.52
CNOT7-208ENST00000520178 CLTCQ00610 1675 aaKnown RBP18.27■□□□□ 0.52
CNOT7-208ENST00000520178 ZNF335Q9H4Z2 1342 aaPredicted RBP18.26■□□□□ 0.51
CNOT7-208ENST00000520178 CLIP1P30622 1438 aa18.26■□□□□ 0.51
CNOT7-208ENST00000520178 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
CNOT7-208ENST00000520178 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
CNOT7-208ENST00000520178 PKD2Q13563 968 aa18.24■□□□□ 0.51
CNOT7-208ENST00000520178 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CNOT7-208ENST00000520178 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
CNOT7-208ENST00000520178 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
CNOT7-208ENST00000520178 PLXNC1O60486 1568 aa18.19■□□□□ 0.5
CNOT7-208ENST00000520178 CPS1P31327 1500 aa18.18■□□□□ 0.5
CNOT7-208ENST00000520178 ARHGAP35Q9NRY4 1499 aa18.17■□□□□ 0.5
CNOT7-208ENST00000520178 DNMT1P26358 1616 aaKnown RBP18.16■□□□□ 0.5
CNOT7-208ENST00000520178 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
CNOT7-208ENST00000520178 HSPA1LP34931 641 aa18.15■□□□□ 0.5
CNOT7-208ENST00000520178 INO80Q9ULG1 1556 aaPredicted RBP18.15■□□□□ 0.5
CNOT7-208ENST00000520178 ADGBQ8N7X0 1667 aa18.13■□□□□ 0.49
CNOT7-208ENST00000520178 ATP1B4Q9UN42 357 aaPredicted RBP18.13■□□□□ 0.49
CNOT7-208ENST00000520178 ATP7AQ04656 1500 aa18.13■□□□□ 0.49
CNOT7-208ENST00000520178 NEURL4Q96JN8 1562 aa18.13■□□□□ 0.49
CNOT7-208ENST00000520178 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
CNOT7-208ENST00000520178 A2ML1A8K2U0 1454 aa18.12■□□□□ 0.49
CNOT7-208ENST00000520178 ALKQ9UM73 1620 aa18.1■□□□□ 0.49
CNOT7-208ENST00000520178 SYCP2Q9BX26 1530 aa18.1■□□□□ 0.49
CNOT7-208ENST00000520178 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
CNOT7-208ENST00000520178 TOM1O60784 492 aa18.1■□□□□ 0.49
CNOT7-208ENST00000520178 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
CNOT7-208ENST00000520178 A2MP01023 1474 aa18.07■□□□□ 0.48
CNOT7-208ENST00000520178 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
CNOT7-208ENST00000520178 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
CNOT7-208ENST00000520178 PIP4K2BP78356 416 aa18.05■□□□□ 0.48
CNOT7-208ENST00000520178 SPAG9O60271 1321 aaKnown RBP18.04■□□□□ 0.48
CNOT7-208ENST00000520178 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
CNOT7-208ENST00000520178 DEPDC5O75140 1603 aa18.04■□□□□ 0.48
CNOT7-208ENST00000520178 CASKIN1Q8WXD9 1431 aa18.02■□□□□ 0.48
CNOT7-208ENST00000520178 KIAA1107Q9UPP5 1409 aa18.02■□□□□ 0.48
CNOT7-208ENST00000520178 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.47
CNOT7-208ENST00000520178 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
CNOT7-208ENST00000520178 FAM135AQ9P2D6 1515 aa18.01■□□□□ 0.47
CNOT7-208ENST00000520178 RNF17Q9BXT8 1623 aaKnown RBP18.01■□□□□ 0.47
CNOT7-208ENST00000520178 SYNMO15061 1565 aa18■□□□□ 0.47
CNOT7-208ENST00000520178 GPATCH8Q9UKJ3 1502 aaKnown RBP18■□□□□ 0.47
CNOT7-208ENST00000520178 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms