RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 GPATCH8Q9UKJ3 1502 aaKnown RBP12.15□□□□□ -0.46
HMGB4-203ENST00000519684 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.46
HMGB4-203ENST00000519684 ABCC5O15440 1437 aa12.15□□□□□ -0.46
HMGB4-203ENST00000519684 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
HMGB4-203ENST00000519684 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
HMGB4-203ENST00000519684 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
HMGB4-203ENST00000519684 KDM6BO15054 1643 aa12.13□□□□□ -0.47
HMGB4-203ENST00000519684 TONSLQ96HA7 1378 aa12.13□□□□□ -0.47
HMGB4-203ENST00000519684 ZNF644Q9H582 1327 aaPredicted RBP12.13□□□□□ -0.47
HMGB4-203ENST00000519684 AEBP2Q6ZN18 517 aaPredicted RBP12.11□□□□□ -0.47
HMGB4-203ENST00000519684 ABCC10Q5T3U5 1492 aa12.11□□□□□ -0.47
HMGB4-203ENST00000519684 ZNF777Q9ULD5 760 aaPredicted RBP12.11□□□□□ -0.47
HMGB4-203ENST00000519684 CLASP1Q7Z460 1538 aa12.1□□□□□ -0.47
HMGB4-203ENST00000519684 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
HMGB4-203ENST00000519684 MIER1Q8N108 512 aa12.1□□□□□ -0.47
HMGB4-203ENST00000519684 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
HMGB4-203ENST00000519684 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
HMGB4-203ENST00000519684 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
HMGB4-203ENST00000519684 ERCC6L2Q5T890 1561 aa12.07□□□□□ -0.48
HMGB4-203ENST00000519684 ANKRD30AQ9BXX3 1397 aa12.06□□□□□ -0.48
HMGB4-203ENST00000519684 PREX2Q70Z35 1606 aa12.06□□□□□ -0.48
HMGB4-203ENST00000519684 MPHOSPH9Q99550 1183 aa12.06□□□□□ -0.48
HMGB4-203ENST00000519684 SHANK2Q9UPX8 1470 aa12.05□□□□□ -0.48
HMGB4-203ENST00000519684 NCOA1Q15788 1441 aa12.05□□□□□ -0.48
HMGB4-203ENST00000519684 DENND4BO75064 1496 aaPredicted RBP12.04□□□□□ -0.48
HMGB4-203ENST00000519684 ARHGEF5Q12774 1597 aa12.04□□□□□ -0.48
HMGB4-203ENST00000519684 CDC42BPBQ9Y5S2 1711 aa12.03□□□□□ -0.48
HMGB4-203ENST00000519684 C9orf84Q5VXU9 1444 aa12.02□□□□□ -0.49
HMGB4-203ENST00000519684 MYO5CQ9NQX4 1742 aa12.01□□□□□ -0.49
HMGB4-203ENST00000519684 ZCCHC11Q5TAX3 1644 aaKnown RBP12.01□□□□□ -0.49
HMGB4-203ENST00000519684 SAMD9LQ8IVG5 1584 aa12.01□□□□□ -0.49
HMGB4-203ENST00000519684 UHRF1BP1LA0JNW5 1464 aa12.01□□□□□ -0.49
HMGB4-203ENST00000519684 TSPY4P0CV99 314 aa12□□□□□ -0.49
HMGB4-203ENST00000519684 TSPY10P0CW01 314 aa12□□□□□ -0.49
HMGB4-203ENST00000519684 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
HMGB4-203ENST00000519684 TTC37Q6PGP7 1564 aa12□□□□□ -0.49
HMGB4-203ENST00000519684 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
HMGB4-203ENST00000519684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.99□□□□□ -0.49
HMGB4-203ENST00000519684 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
HMGB4-203ENST00000519684 CCDC141Q6ZP82 1450 aa11.99□□□□□ -0.49
HMGB4-203ENST00000519684 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
HMGB4-203ENST00000519684 ANKRD50Q9ULJ7 1429 aa11.99□□□□□ -0.49
HMGB4-203ENST00000519684 KDM5BQ9UGL1 1544 aa11.98□□□□□ -0.49
HMGB4-203ENST00000519684 PZPP20742 1482 aa11.98□□□□□ -0.49
HMGB4-203ENST00000519684 ANKRD30BQ9BXX2 1392 aa11.98□□□□□ -0.49
HMGB4-203ENST00000519684 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
HMGB4-203ENST00000519684 HNRNPMP52272 730 aaKnown RBP eCLIP11.97□□□□□ -0.49
HMGB4-203ENST00000519684 FOXD1Q16676 465 aa11.97□□□□□ -0.49
HMGB4-203ENST00000519684 RPRD2Q5VT52 1461 aaKnown RBP11.96□□□□□ -0.49
HMGB4-203ENST00000519684 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.49
HMGB4-203ENST00000519684 MBD5Q9P267 1494 aa11.96□□□□□ -0.49
HMGB4-203ENST00000519684 SYCP2Q9BX26 1530 aa11.95□□□□□ -0.5
HMGB4-203ENST00000519684 KIF15Q9NS87 1388 aa11.95□□□□□ -0.5
HMGB4-203ENST00000519684 KIAA1107Q9UPP5 1409 aa11.94□□□□□ -0.5
HMGB4-203ENST00000519684 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
HMGB4-203ENST00000519684 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
HMGB4-203ENST00000519684 KCNH8Q96L42 1107 aa11.93□□□□□ -0.5
HMGB4-203ENST00000519684 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
HMGB4-203ENST00000519684 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
HMGB4-203ENST00000519684 L3MBTL2Q969R5 705 aa11.92□□□□□ -0.5
HMGB4-203ENST00000519684 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
HMGB4-203ENST00000519684 TEX14Q8IWB6 1497 aa11.91□□□□□ -0.5
HMGB4-203ENST00000519684 NUP155O75694 1391 aa11.91□□□□□ -0.5
HMGB4-203ENST00000519684 PKD2Q13563 968 aa11.91□□□□□ -0.5
HMGB4-203ENST00000519684 PLCH2O75038 1416 aa11.9□□□□□ -0.5
HMGB4-203ENST00000519684 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
HMGB4-203ENST00000519684 EFCAB2Q5VUJ9 269 aa11.88□□□□□ -0.51
HMGB4-203ENST00000519684 ABCC1P33527 1531 aa11.87□□□□□ -0.51
HMGB4-203ENST00000519684 EIF4G2P78344 907 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGB4-203ENST00000519684 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
HMGB4-203ENST00000519684 WDR7Q9Y4E6 1490 aa11.87□□□□□ -0.51
HMGB4-203ENST00000519684 UNC13BO14795 1591 aa11.87□□□□□ -0.51
HMGB4-203ENST00000519684 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
HMGB4-203ENST00000519684 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
HMGB4-203ENST00000519684 FAM135AQ9P2D6 1515 aa11.85□□□□□ -0.51
HMGB4-203ENST00000519684 OSCARQ8IYS5 282 aa11.85□□□□□ -0.51
HMGB4-203ENST00000519684 ARHGEF12Q9NZN5 1544 aa11.84□□□□□ -0.51
HMGB4-203ENST00000519684 ANP32CO43423 234 aa11.84□□□□□ -0.51
HMGB4-203ENST00000519684 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.51
HMGB4-203ENST00000519684 ABCA9Q8IUA7 1624 aa11.83□□□□□ -0.52
HMGB4-203ENST00000519684 ERBINQ96RT1 1412 aa11.83□□□□□ -0.52
HMGB4-203ENST00000519684 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
HMGB4-203ENST00000519684 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
HMGB4-203ENST00000519684 POLR1AO95602 1720 aaPredicted RBP11.8□□□□□ -0.52
HMGB4-203ENST00000519684 ASXL2Q76L83 1435 aa11.8□□□□□ -0.52
HMGB4-203ENST00000519684 TRAPPC8Q9Y2L5 1435 aa11.8□□□□□ -0.52
HMGB4-203ENST00000519684 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
HMGB4-203ENST00000519684 FANCAO15360 1455 aa11.79□□□□□ -0.52
HMGB4-203ENST00000519684 SPAG9O60271 1321 aaKnown RBP11.79□□□□□ -0.52
HMGB4-203ENST00000519684 RTEL1-TNFRSF6BF6WH68 1400 aa11.79□□□□□ -0.52
HMGB4-203ENST00000519684 CCER2I3L3R5 266 aa11.78□□□□□ -0.52
HMGB4-203ENST00000519684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGB4-203ENST00000519684 MAGI2Q86UL8 1455 aa11.78□□□□□ -0.52
HMGB4-203ENST00000519684 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
HMGB4-203ENST00000519684 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
HMGB4-203ENST00000519684 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
HMGB4-203ENST00000519684 CCDC144AA2RUR9 1427 aa11.77□□□□□ -0.53
HMGB4-203ENST00000519684 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
HMGB4-203ENST00000519684 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
HMGB4-203ENST00000519684 CNTLNQ9NXG0 1405 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms