RNA–Protein interactions for RNA: ENST00000519550.1

LINC01289-201, Transcript of long intergenic non-protein coding RNA 1289, humanhuman

TSL 1 (best) BASIC

Gene LINC01289, Length 3,712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01289-201ENST00000519550 PCF11O94913 1555 aaKnown RBP7.58□□□□□ -1.2
LINC01289-201ENST00000519550 BRPF1P55201 1214 aaPredicted RBP7.57□□□□□ -1.2
LINC01289-201ENST00000519550 KIF13AQ9H1H9 1805 aa7.56□□□□□ -1.2
LINC01289-201ENST00000519550 MAP3K4Q9Y6R4 1608 aa7.56□□□□□ -1.2
LINC01289-201ENST00000519550 DNAJC5Q9H3Z4 198 aa7.56□□□□□ -1.2
LINC01289-201ENST00000519550 ARAP3Q8WWN8 1544 aa7.55□□□□□ -1.2
LINC01289-201ENST00000519550 MKRN4PQ13434 485 aaPredicted RBP7.54□□□□□ -1.2
LINC01289-201ENST00000519550 PPRC1Q5VV67 1664 aaKnown RBP7.54□□□□□ -1.2
LINC01289-201ENST00000519550 APLP2Q06481 763 aa7.53□□□□□ -1.2
LINC01289-201ENST00000519550 ABCA9Q8IUA7 1624 aa7.53□□□□□ -1.2
LINC01289-201ENST00000519550 CCDC18Q5T9S5 1454 aa7.53□□□□□ -1.2
LINC01289-201ENST00000519550 CASKIN1Q8WXD9 1431 aa7.53□□□□□ -1.2
LINC01289-201ENST00000519550 TIAM1Q13009 1591 aa7.51□□□□□ -1.21
LINC01289-201ENST00000519550 LOC105371045A0A1W2PR82 267 aa7.51□□□□□ -1.21
LINC01289-201ENST00000519550 CARMIL2Q6F5E8 1435 aa7.51□□□□□ -1.21
LINC01289-201ENST00000519550 CEP162Q5TB80 1403 aa7.51□□□□□ -1.21
LINC01289-201ENST00000519550 FMN1Q68DA7 1419 aa7.51□□□□□ -1.21
LINC01289-201ENST00000519550 PRG4Q92954 1404 aaPredicted RBP7.51□□□□□ -1.21
LINC01289-201ENST00000519550 NUP153P49790 1475 aaKnown RBP7.5□□□□□ -1.21
LINC01289-201ENST00000519550 PROM2Q8N271 834 aa7.5□□□□□ -1.21
LINC01289-201ENST00000519550 ITSN2Q9NZM3 1697 aa7.5□□□□□ -1.21
LINC01289-201ENST00000519550 CFAP74Q9C0B2 1584 aa7.5□□□□□ -1.21
LINC01289-201ENST00000519550 PREX2Q70Z35 1606 aa7.5□□□□□ -1.21
LINC01289-201ENST00000519550 DIP2BQ9P265 1576 aa7.5□□□□□ -1.21
LINC01289-201ENST00000519550 HOXD11P31277 338 aaPredicted RBP7.49□□□□□ -1.21
LINC01289-201ENST00000519550 CDC42BPAQ5VT25 1732 aa7.49□□□□□ -1.21
LINC01289-201ENST00000519550 CROCC2H7BZ55 1655 aa7.49□□□□□ -1.21
LINC01289-201ENST00000519550 EHBP1L1Q8N3D4 1523 aa7.48□□□□□ -1.21
LINC01289-201ENST00000519550 VPS8Q8N3P4 1428 aa7.48□□□□□ -1.21
LINC01289-201ENST00000519550 MYO5CQ9NQX4 1742 aa7.48□□□□□ -1.21
LINC01289-201ENST00000519550 OSCARQ8IYS5 282 aa7.48□□□□□ -1.21
LINC01289-201ENST00000519550 C1orf115Q9H7X2 142 aa7.48□□□□□ -1.21
LINC01289-201ENST00000519550 BCORL1Q5H9F3 1711 aa7.47□□□□□ -1.21
LINC01289-201ENST00000519550 UACAQ9BZF9 1416 aa7.46□□□□□ -1.21
LINC01289-201ENST00000519550 SUPT6HQ7KZ85 1726 aaKnown RBP7.46□□□□□ -1.21
LINC01289-201ENST00000519550 CDC42BPBQ9Y5S2 1711 aa7.46□□□□□ -1.21
LINC01289-201ENST00000519550 MAGI3Q5TCQ9 1506 aa7.46□□□□□ -1.22
LINC01289-201ENST00000519550 CLIP1P30622 1438 aa7.46□□□□□ -1.22
LINC01289-201ENST00000519550 ARID3CA6NKF2 412 aa7.46□□□□□ -1.22
LINC01289-201ENST00000519550 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.22
LINC01289-201ENST00000519550 EPRSP07814 1512 aaKnown RBP7.46□□□□□ -1.22
LINC01289-201ENST00000519550 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
LINC01289-201ENST00000519550 NEUROD2Q15784 382 aa7.45□□□□□ -1.22
LINC01289-201ENST00000519550 POTEDQ86YR6 584 aa7.44□□□□□ -1.22
LINC01289-201ENST00000519550 KIF14Q15058 1648 aa7.44□□□□□ -1.22
LINC01289-201ENST00000519550 ABCC10Q5T3U5 1492 aa7.44□□□□□ -1.22
LINC01289-201ENST00000519550 MSH5O43196 834 aa7.44□□□□□ -1.22
LINC01289-201ENST00000519550 MAST1Q9Y2H9 1570 aa7.42□□□□□ -1.22
LINC01289-201ENST00000519550 JPH4Q96JJ6 628 aa7.42□□□□□ -1.22
LINC01289-201ENST00000519550 ATP10BO94823 1461 aa7.42□□□□□ -1.22
LINC01289-201ENST00000519550 TTC37Q6PGP7 1564 aa7.42□□□□□ -1.22
LINC01289-201ENST00000519550 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
LINC01289-201ENST00000519550 PLB1Q6P1J6 1458 aa7.41□□□□□ -1.22
LINC01289-201ENST00000519550 LMOD2Q6P5Q4 547 aa7.41□□□□□ -1.22
LINC01289-201ENST00000519550 RICTORQ6R327 1708 aa7.41□□□□□ -1.22
LINC01289-201ENST00000519550 FHOD3Q2V2M9 1422 aa7.41□□□□□ -1.22
LINC01289-201ENST00000519550 ZNF219Q9P2Y4 722 aaPredicted RBP7.41□□□□□ -1.22
LINC01289-201ENST00000519550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01289-201ENST00000519550 NECTIN2Q92692 538 aa7.4□□□□□ -1.22
LINC01289-201ENST00000519550 WDR7Q9Y4E6 1490 aa7.4□□□□□ -1.22
LINC01289-201ENST00000519550 ARHGEF5Q12774 1597 aa7.4□□□□□ -1.22
LINC01289-201ENST00000519550 ADGBQ8N7X0 1667 aa7.4□□□□□ -1.22
LINC01289-201ENST00000519550 TCOF1Q13428 1488 aaKnown RBP7.4□□□□□ -1.23
LINC01289-201ENST00000519550 REREQ9P2R6 1566 aa7.4□□□□□ -1.23
LINC01289-201ENST00000519550 ZMYM4Q5VZL5 1548 aa7.39□□□□□ -1.23
LINC01289-201ENST00000519550 PTPRGP23470 1445 aa7.39□□□□□ -1.23
LINC01289-201ENST00000519550 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
LINC01289-201ENST00000519550 FRMPD1Q5SYB0 1578 aa7.38□□□□□ -1.23
LINC01289-201ENST00000519550 LRRC9Q6ZRR7 1453 aa7.38□□□□□ -1.23
LINC01289-201ENST00000519550 KDM5CP41229 1560 aa7.38□□□□□ -1.23
LINC01289-201ENST00000519550 CIZ1Q9ULV3 898 aaPredicted RBP7.38□□□□□ -1.23
LINC01289-201ENST00000519550 SLC24A3Q9HC58 644 aa7.38□□□□□ -1.23
LINC01289-201ENST00000519550 INO80Q9ULG1 1556 aaPredicted RBP7.37□□□□□ -1.23
LINC01289-201ENST00000519550 CDK13Q14004 1512 aaKnown RBP7.37□□□□□ -1.23
LINC01289-201ENST00000519550 PLXNC1O60486 1568 aa7.36□□□□□ -1.23
LINC01289-201ENST00000519550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.36□□□□□ -1.23
LINC01289-201ENST00000519550 TROQ12816 1431 aaPredicted RBP7.36□□□□□ -1.23
LINC01289-201ENST00000519550 ABCC1P33527 1531 aa7.36□□□□□ -1.23
LINC01289-201ENST00000519550 DNMT1P26358 1616 aaKnown RBP7.36□□□□□ -1.23
LINC01289-201ENST00000519550 GCC2Q8IWJ2 1684 aa7.36□□□□□ -1.23
LINC01289-201ENST00000519550 SAMD9LQ8IVG5 1584 aa7.35□□□□□ -1.23
LINC01289-201ENST00000519550 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC01289-201ENST00000519550 U3KPZ7 1027 aaPredicted RBP7.35□□□□□ -1.23
LINC01289-201ENST00000519550 EIF2AK4Q9P2K8 1649 aaKnown RBP7.34□□□□□ -1.23
LINC01289-201ENST00000519550 IGSF3O75054 1194 aa7.34□□□□□ -1.23
LINC01289-201ENST00000519550 DMRT2Q9Y5R5 561 aa7.34□□□□□ -1.24
LINC01289-201ENST00000519550 NEO1Q92859 1461 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 FAM135AQ9P2D6 1515 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 SHANK2Q9UPX8 1470 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 DEPDC5O75140 1603 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 ASXL2Q76L83 1435 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 GTPBP6O43824 516 aaPredicted RBP7.33□□□□□ -1.24
LINC01289-201ENST00000519550 KCNV2Q8TDN2 545 aa7.33□□□□□ -1.24
LINC01289-201ENST00000519550 ZNF428Q96B54 188 aa7.32□□□□□ -1.24
LINC01289-201ENST00000519550 MIA2Q96PC5 1412 aa7.32□□□□□ -1.24
LINC01289-201ENST00000519550 PTPN23Q9H3S7 1636 aa7.32□□□□□ -1.24
LINC01289-201ENST00000519550 GPBP1L1Q9HC44 474 aaPredicted RBP7.32□□□□□ -1.24
LINC01289-201ENST00000519550 PHLDB1Q86UU1 1377 aa7.31□□□□□ -1.24
LINC01289-201ENST00000519550 RRBP1Q9P2E9 1410 aaKnown RBP7.31□□□□□ -1.24
LINC01289-201ENST00000519550 PPARGC1BQ86YN6 1023 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms