RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 ARHGAP35Q9NRY4 1499 aa10.52□□□□□ -0.72
SLIT3-205ENST00000519486 A0A0G2JS52 829 aa10.52□□□□□ -0.72
SLIT3-205ENST00000519486 PRXQ9BXM0 1461 aa10.52□□□□□ -0.73
SLIT3-205ENST00000519486 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
SLIT3-205ENST00000519486 KIAA0586Q9BVV6 1533 aa10.52□□□□□ -0.73
SLIT3-205ENST00000519486 MRS2Q9HD23 443 aa10.51□□□□□ -0.73
SLIT3-205ENST00000519486 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
SLIT3-205ENST00000519486 UACAQ9BZF9 1416 aa10.51□□□□□ -0.73
SLIT3-205ENST00000519486 WASHC2CQ9Y4E1 1318 aa10.5□□□□□ -0.73
SLIT3-205ENST00000519486 SENP3-EIF4A1A0A087X0R7 540 aa10.5□□□□□ -0.73
SLIT3-205ENST00000519486 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
SLIT3-205ENST00000519486 ABCA10Q8WWZ4 1543 aa10.5□□□□□ -0.73
SLIT3-205ENST00000519486 TIMELESSQ9UNS1 1208 aa10.49□□□□□ -0.73
SLIT3-205ENST00000519486 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.49□□□□□ -0.73
SLIT3-205ENST00000519486 KDM2AQ9Y2K7 1162 aa10.49□□□□□ -0.73
SLIT3-205ENST00000519486 CUX1P39880 1505 aa10.48□□□□□ -0.73
SLIT3-205ENST00000519486 KIF3BO15066 747 aa10.48□□□□□ -0.73
SLIT3-205ENST00000519486 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
SLIT3-205ENST00000519486 DAXXQ9UER7 740 aaPredicted RBP10.48□□□□□ -0.73
SLIT3-205ENST00000519486 PHLDB1Q86UU1 1377 aa10.48□□□□□ -0.73
SLIT3-205ENST00000519486 CD109Q6YHK3 1445 aa10.47□□□□□ -0.73
SLIT3-205ENST00000519486 DCAF8L1A6NGE4 600 aa10.47□□□□□ -0.73
SLIT3-205ENST00000519486 ERICH3Q5RHP9 1530 aa10.47□□□□□ -0.73
SLIT3-205ENST00000519486 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.74
SLIT3-205ENST00000519486 CCDC18Q5T9S5 1454 aa10.44□□□□□ -0.74
SLIT3-205ENST00000519486 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
SLIT3-205ENST00000519486 ZBTB47Q9UFB7 747 aaPredicted RBP10.44□□□□□ -0.74
SLIT3-205ENST00000519486 HSPA5P11021 654 aaKnown RBP10.43□□□□□ -0.74
SLIT3-205ENST00000519486 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
SLIT3-205ENST00000519486 KIF21AQ7Z4S6 1674 aa10.43□□□□□ -0.74
SLIT3-205ENST00000519486 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
SLIT3-205ENST00000519486 TMC1Q8TDI8 760 aa10.42□□□□□ -0.74
SLIT3-205ENST00000519486 CCER2I3L3R5 266 aa10.41□□□□□ -0.74
SLIT3-205ENST00000519486 NOP58Q9Y2X3 529 aaKnown RBP10.41□□□□□ -0.74
SLIT3-205ENST00000519486 LRRC9Q6ZRR7 1453 aa10.41□□□□□ -0.74
SLIT3-205ENST00000519486 THEMISQ8N1K5 641 aaPredicted RBP10.41□□□□□ -0.74
SLIT3-205ENST00000519486 AKNAQ7Z591 1439 aa10.4□□□□□ -0.74
SLIT3-205ENST00000519486 MPHOSPH9Q99550 1183 aa10.4□□□□□ -0.74
SLIT3-205ENST00000519486 L3MBTL2Q969R5 705 aa10.38□□□□□ -0.75
SLIT3-205ENST00000519486 FANCIQ9NVI1 1328 aa10.38□□□□□ -0.75
SLIT3-205ENST00000519486 RAPGEF3O95398 923 aa10.38□□□□□ -0.75
SLIT3-205ENST00000519486 RGL3Q3MIN7 710 aa10.38□□□□□ -0.75
SLIT3-205ENST00000519486 ANKLE2Q86XL3 938 aa10.37□□□□□ -0.75
SLIT3-205ENST00000519486 TOM1O60784 492 aa10.36□□□□□ -0.75
SLIT3-205ENST00000519486 CCDC9Q9Y3X0 531 aaKnown RBP10.36□□□□□ -0.75
SLIT3-205ENST00000519486 HNRNPMP52272 730 aaKnown RBP eCLIP10.36□□□□□ -0.75
SLIT3-205ENST00000519486 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
SLIT3-205ENST00000519486 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
SLIT3-205ENST00000519486 POGKQ9P215 609 aa10.35□□□□□ -0.75
SLIT3-205ENST00000519486 UBE2Q2Q8WVN8 375 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 FGD6Q6ZV73 1430 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 WDR97A6NE52 1622 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 ATF3P18847 181 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 NEFMP07197 916 aa10.34□□□□□ -0.75
SLIT3-205ENST00000519486 THOC2Q8NI27 1593 aaKnown RBP10.33□□□□□ -0.76
SLIT3-205ENST00000519486 UBAP1LF5GYI3 381 aa10.33□□□□□ -0.76
SLIT3-205ENST00000519486 PIP4K2BP78356 416 aa10.33□□□□□ -0.76
SLIT3-205ENST00000519486 NPM2Q86SE8 214 aaKnown RBP10.33□□□□□ -0.76
SLIT3-205ENST00000519486 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.33□□□□□ -0.76
SLIT3-205ENST00000519486 ASXL2Q76L83 1435 aa10.33□□□□□ -0.76
SLIT3-205ENST00000519486 DENND4BO75064 1496 aaPredicted RBP10.32□□□□□ -0.76
SLIT3-205ENST00000519486 PKD2Q13563 968 aa10.32□□□□□ -0.76
SLIT3-205ENST00000519486 PKNOX2Q96KN3 472 aa10.32□□□□□ -0.76
SLIT3-205ENST00000519486 SF3B2Q13435 895 aaKnown RBP10.32□□□□□ -0.76
SLIT3-205ENST00000519486 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
SLIT3-205ENST00000519486 ANKRD30AQ9BXX3 1397 aa10.31□□□□□ -0.76
SLIT3-205ENST00000519486 TIAM1Q13009 1591 aa10.31□□□□□ -0.76
SLIT3-205ENST00000519486 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
SLIT3-205ENST00000519486 CASKIN1Q8WXD9 1431 aa10.31□□□□□ -0.76
SLIT3-205ENST00000519486 SCAPERQ9BY12 1400 aa10.31□□□□□ -0.76
SLIT3-205ENST00000519486 IQGAP2Q13576 1575 aa10.3□□□□□ -0.76
SLIT3-205ENST00000519486 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
SLIT3-205ENST00000519486 PLEKHH2Q8IVE3 1493 aa10.29□□□□□ -0.76
SLIT3-205ENST00000519486 PROSER2Q86WR7 435 aaPredicted RBP10.29□□□□□ -0.76
SLIT3-205ENST00000519486 ZNF644Q9H582 1327 aaPredicted RBP10.29□□□□□ -0.76
SLIT3-205ENST00000519486 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
SLIT3-205ENST00000519486 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
SLIT3-205ENST00000519486 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
SLIT3-205ENST00000519486 MYOM3Q5VTT5 1437 aa10.28□□□□□ -0.76
SLIT3-205ENST00000519486 MSH5O43196 834 aa10.28□□□□□ -0.76
SLIT3-205ENST00000519486 PPP4R2Q9NY27 417 aa10.28□□□□□ -0.76
SLIT3-205ENST00000519486 ARHGAP5Q13017 1502 aa10.27□□□□□ -0.76
SLIT3-205ENST00000519486 AFAP1Q8N556 730 aa10.27□□□□□ -0.77
SLIT3-205ENST00000519486 NCOA2Q15596 1464 aa10.26□□□□□ -0.77
SLIT3-205ENST00000519486 CUL7Q14999 1698 aa10.26□□□□□ -0.77
SLIT3-205ENST00000519486 NUP160Q12769 1436 aa10.26□□□□□ -0.77
SLIT3-205ENST00000519486 FYCO1Q9BQS8 1478 aa10.26□□□□□ -0.77
SLIT3-205ENST00000519486 TXNDC2Q86VQ3 553 aa10.25□□□□□ -0.77
SLIT3-205ENST00000519486 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
SLIT3-205ENST00000519486 PRKRIP1Q9H875 184 aaPredicted RBP10.24□□□□□ -0.77
SLIT3-205ENST00000519486 NUP155O75694 1391 aa10.24□□□□□ -0.77
SLIT3-205ENST00000519486 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
SLIT3-205ENST00000519486 PPM1GO15355 546 aaPredicted RBP10.23□□□□□ -0.77
SLIT3-205ENST00000519486 ABCC2Q92887 1545 aa10.23□□□□□ -0.77
SLIT3-205ENST00000519486 FANCAO15360 1455 aa10.23□□□□□ -0.77
SLIT3-205ENST00000519486 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
SLIT3-205ENST00000519486 PCF11O94913 1555 aaKnown RBP10.22□□□□□ -0.77
SLIT3-205ENST00000519486 LAS1LQ9Y4W2 734 aaKnown RBP10.21□□□□□ -0.77
SLIT3-205ENST00000519486 CC2D1BQ5T0F9 858 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms