RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 GSE1Q14687 1217 aa12.04□□□□□ -0.48
PABPC1-207ENST00000518716 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
PABPC1-207ENST00000518716 PDS5BQ9NTI5 1447 aa12.01□□□□□ -0.49
PABPC1-207ENST00000518716 TRIM41Q8WV44 630 aa12□□□□□ -0.49
PABPC1-207ENST00000518716 HOXB1P14653 301 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-207ENST00000518716 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
PABPC1-207ENST00000518716 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
PABPC1-207ENST00000518716 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
PABPC1-207ENST00000518716 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
PABPC1-207ENST00000518716 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
PABPC1-207ENST00000518716 PDAP1Q13442 181 aaKnown RBP11.95□□□□□ -0.5
PABPC1-207ENST00000518716 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
PABPC1-207ENST00000518716 RNF166Q96A37 237 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-207ENST00000518716 ERBB3P21860 1342 aa11.94□□□□□ -0.5
PABPC1-207ENST00000518716 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
PABPC1-207ENST00000518716 ZNF710Q8N1W2 664 aa11.93□□□□□ -0.5
PABPC1-207ENST00000518716 WDR62O43379 1518 aa11.92□□□□□ -0.5
PABPC1-207ENST00000518716 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
PABPC1-207ENST00000518716 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-207ENST00000518716 G3V3G9 751 aa11.9□□□□□ -0.5
PABPC1-207ENST00000518716 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
PABPC1-207ENST00000518716 VARS2Q5ST30 1063 aaKnown RBP11.88□□□□□ -0.51
PABPC1-207ENST00000518716 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
PABPC1-207ENST00000518716 CEP164Q9UPV0 1460 aa11.79□□□□□ -0.52
PABPC1-207ENST00000518716 RIMBP2O15034 1052 aa11.79□□□□□ -0.52
PABPC1-207ENST00000518716 TMEM92Q6UXU6 159 aa11.79□□□□□ -0.52
PABPC1-207ENST00000518716 ZNF687Q8N1G0 1237 aa11.79□□□□□ -0.52
PABPC1-207ENST00000518716 CFTRP13569 1480 aa11.77□□□□□ -0.52
PABPC1-207ENST00000518716 FANCD2Q9BXW9 1451 aa11.77□□□□□ -0.52
PABPC1-207ENST00000518716 WIZO95785 1651 aa11.75□□□□□ -0.53
PABPC1-207ENST00000518716 GPR153Q6NV75 609 aa11.75□□□□□ -0.53
PABPC1-207ENST00000518716 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
PABPC1-207ENST00000518716 ZSWIM6Q9HCJ5 1215 aa11.74□□□□□ -0.53
PABPC1-207ENST00000518716 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
PABPC1-207ENST00000518716 MICALL2Q8IY33 904 aa11.73□□□□□ -0.53
PABPC1-207ENST00000518716 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
PABPC1-207ENST00000518716 PTGER2P43116 358 aa11.69□□□□□ -0.54
PABPC1-207ENST00000518716 SPOCK2Q92563 424 aa11.69□□□□□ -0.54
PABPC1-207ENST00000518716 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
PABPC1-207ENST00000518716 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
PABPC1-207ENST00000518716 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
PABPC1-207ENST00000518716 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
PABPC1-207ENST00000518716 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
PABPC1-207ENST00000518716 ARSIQ5FYB1 569 aa11.64□□□□□ -0.55
PABPC1-207ENST00000518716 RSF1Q96T23 1441 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-207ENST00000518716 MS4A4AQ96JQ5 239 aa11.63□□□□□ -0.55
PABPC1-207ENST00000518716 ARHGEF11O15085 1522 aa11.63□□□□□ -0.55
PABPC1-207ENST00000518716 ZNF608Q9ULD9 1512 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-207ENST00000518716 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■□□□ 14.3
PABPC1-207ENST00000518716 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
PABPC1-207ENST00000518716 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
PABPC1-207ENST00000518716 LSM11P83369 360 aaKnown RBP eCLIP11.59□□□□□ -0.55
PABPC1-207ENST00000518716 ZNF316A6NFI3 1004 aaPredicted RBP11.58□□□□□ -0.56
PABPC1-207ENST00000518716 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
PABPC1-207ENST00000518716 SOX12O15370 315 aa11.54□□□□□ -0.56
PABPC1-207ENST00000518716 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
PABPC1-207ENST00000518716 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
PABPC1-207ENST00000518716 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
PABPC1-207ENST00000518716 ARAP1Q96P48 1450 aa11.51□□□□□ -0.57
PABPC1-207ENST00000518716 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
PABPC1-207ENST00000518716 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
PABPC1-207ENST00000518716 PLA2G2EQ9NZK7 142 aa11.49□□□□□ -0.57
PABPC1-207ENST00000518716 RNF25Q96BH1 459 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-207ENST00000518716 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
PABPC1-207ENST00000518716 ABCC8Q09428 1581 aa11.48□□□□□ -0.57
PABPC1-207ENST00000518716 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.57
PABPC1-207ENST00000518716 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
PABPC1-207ENST00000518716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-207ENST00000518716 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-207ENST00000518716 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
PABPC1-207ENST00000518716 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
PABPC1-207ENST00000518716 RIOK3O14730 519 aaKnown RBP11.44□□□□□ -0.58
PABPC1-207ENST00000518716 PBX2P40425 430 aa11.44□□□□□ -0.58
PABPC1-207ENST00000518716 CHD1O14646 1710 aa11.43□□□□□ -0.58
PABPC1-207ENST00000518716 NUDT7P0C024 238 aa11.43□□□□□ -0.58
PABPC1-207ENST00000518716 HCSTQ9UBK5 93 aa11.41□□□□□ -0.58
PABPC1-207ENST00000518716 POLA1P09884 1462 aaPredicted RBP11.4□□□□□ -0.58
PABPC1-207ENST00000518716 KIF3CO14782 793 aa11.4□□□□□ -0.58
PABPC1-207ENST00000518716 LHX6Q9UPM6 363 aa11.4□□□□□ -0.58
PABPC1-207ENST00000518716 FBXO22Q8NEZ5 403 aa11.39□□□□□ -0.59
PABPC1-207ENST00000518716 CLASP1Q7Z460 1538 aa11.37□□□□□ -0.59
PABPC1-207ENST00000518716 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-207ENST00000518716 RAD54L2Q9Y4B4 1467 aa11.37□□□□□ -0.59
PABPC1-207ENST00000518716 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
PABPC1-207ENST00000518716 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
PABPC1-207ENST00000518716 NLRP6P59044 892 aa11.35□□□□□ -0.59
PABPC1-207ENST00000518716 ADGRD1Q6QNK2 874 aa11.34□□□□□ -0.59
PABPC1-207ENST00000518716 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
PABPC1-207ENST00000518716 SOGA1O94964 1423 aa11.34□□□□□ -0.59
PABPC1-207ENST00000518716 SNAPC4Q5SXM2 1469 aa11.32□□□□□ -0.6
PABPC1-207ENST00000518716 WDR97A6NE52 1622 aa11.31□□□□□ -0.6
PABPC1-207ENST00000518716 SLC34A2O95436 690 aa11.3□□□□□ -0.6
PABPC1-207ENST00000518716 MAGI1Q96QZ7 1491 aaPredicted RBP11.3□□□□□ -0.6
PABPC1-207ENST00000518716 MFRPQ9BY79 579 aa11.29□□□□□ -0.6
PABPC1-207ENST00000518716 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
PABPC1-207ENST00000518716 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-207ENST00000518716 SYNJ1O43426 1573 aa11.28□□□□□ -0.6
PABPC1-207ENST00000518716 SYNJ2O15056 1496 aa11.27□□□□□ -0.6
PABPC1-207ENST00000518716 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-207ENST00000518716 GRIN2BQ13224 1484 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms