RNA–Protein interactions for RNA: ENST00000518094.1

NDRG1-208, Transcript of N-myc downstream regulated 1, human

TSL 2

Gene NDRG1, Length 347 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-208	ENST00000518094	NUP153	P49790	1475 aa	Known RBP	14.11	□□□□□ -0.15
NDRG1-208	ENST00000518094	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.1	□□□□□ -0.15
NDRG1-208	ENST00000518094	MED1	Q15648	1581 aa	Predicted RBP	14.1	□□□□□ -0.15
NDRG1-208	ENST00000518094	SETD1B	Q9UPS6	1966 aa	Known RBP	14.1	□□□□□ -0.15
NDRG1-208	ENST00000518094	ATP10A	O60312	1499 aa		14.1	□□□□□ -0.15
NDRG1-208	ENST00000518094	RAPGEF6	Q8TEU7	1601 aa		14.09	□□□□□ -0.15
NDRG1-208	ENST00000518094	NCOA1	Q15788	1441 aa		14.08	□□□□□ -0.15
NDRG1-208	ENST00000518094	UBAP1L	F5GYI3	381 aa		14.08	□□□□□ -0.16
NDRG1-208	ENST00000518094	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	14.07	□□□□□ -0.16
NDRG1-208	ENST00000518094	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.07	□□□□□ -0.16
NDRG1-208	ENST00000518094	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	14.07	□□□□□ -0.16
NDRG1-208	ENST00000518094	CFAP74	Q9C0B2	1584 aa		14.06	□□□□□ -0.16
NDRG1-208	ENST00000518094	C9orf84	Q5VXU9	1444 aa		14.06	□□□□□ -0.16
NDRG1-208	ENST00000518094	SCAPER	Q9BY12	1400 aa		14.06	□□□□□ -0.16
NDRG1-208	ENST00000518094	C3	P01024	1663 aa		14.05	□□□□□ -0.16
NDRG1-208	ENST00000518094	HSPA1L	P34931	641 aa		14.05	□□□□□ -0.16
NDRG1-208	ENST00000518094	PRX	Q9BXM0	1461 aa		14.05	□□□□□ -0.16
NDRG1-208	ENST00000518094	SAMD9	Q5K651	1589 aa		14.04	□□□□□ -0.16
NDRG1-208	ENST00000518094	NCKAP5L	Q9HCH0	1330 aa		14	□□□□□ -0.17
NDRG1-208	ENST00000518094	PLEKHD1	A6NEE1	506 aa		14	□□□□□ -0.17
NDRG1-208	ENST00000518094	TRAPPC8	Q9Y2L5	1435 aa		13.99	□□□□□ -0.17
NDRG1-208	ENST00000518094	CAMSAP1	Q5T5Y3	1602 aa		13.99	□□□□□ -0.17
NDRG1-208	ENST00000518094	PLCH2	O75038	1416 aa		13.98	□□□□□ -0.17
NDRG1-208	ENST00000518094	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.95	□□□□□ -0.18
NDRG1-208	ENST00000518094	AFAP1	Q8N556	730 aa		13.95	□□□□□ -0.18
NDRG1-208	ENST00000518094	DIP2C	Q9Y2E4	1556 aa		13.95	□□□□□ -0.18
NDRG1-208	ENST00000518094	PIP4K2B	P78356	416 aa		13.93	□□□□□ -0.18
NDRG1-208	ENST00000518094	KDM5C	P41229	1560 aa		13.92	□□□□□ -0.18
NDRG1-208	ENST00000518094	RGS17	Q9UGC6	210 aa	Predicted RBP	13.92	□□□□□ -0.18
NDRG1-208	ENST00000518094	ALK	Q9UM73	1620 aa		13.92	□□□□□ -0.18
NDRG1-208	ENST00000518094	RERE	Q9P2R6	1566 aa		13.92	□□□□□ -0.18
NDRG1-208	ENST00000518094	ABCA6	Q8N139	1617 aa		13.91	□□□□□ -0.18
NDRG1-208	ENST00000518094	TCOF1	Q13428	1488 aa	Known RBP	13.89	□□□□□ -0.19
NDRG1-208	ENST00000518094	AGL	P35573	1532 aa		13.89	□□□□□ -0.19
NDRG1-208	ENST00000518094	CDK13	Q14004	1512 aa	Known RBP	13.89	□□□□□ -0.19
NDRG1-208	ENST00000518094	ZNF518A	Q6AHZ1	1483 aa		13.88	□□□□□ -0.19
NDRG1-208	ENST00000518094	SCAF1	Q9H7N4	1312 aa	Known RBP	13.88	□□□□□ -0.19
NDRG1-208	ENST00000518094	EFCAB2	Q5VUJ9	269 aa		13.87	□□□□□ -0.19
NDRG1-208	ENST00000518094	PHF23	Q9BUL5	403 aa	Predicted RBP	13.87	□□□□□ -0.19
NDRG1-208	ENST00000518094	NPAT	Q14207	1427 aa		13.86	□□□□□ -0.19
NDRG1-208	ENST00000518094	PLA2R1	Q13018	1463 aa		13.86	□□□□□ -0.19
NDRG1-208	ENST00000518094	PKD2	Q13563	968 aa		13.85	□□□□□ -0.19
NDRG1-208	ENST00000518094	MLH3	Q9UHC1	1453 aa		13.85	□□□□□ -0.19
NDRG1-208	ENST00000518094	RANGAP1	P46060	587 aa	Predicted RBP	13.84	□□□□□ -0.19
NDRG1-208	ENST00000518094	MYO5C	Q9NQX4	1742 aa		13.84	□□□□□ -0.19
NDRG1-208	ENST00000518094	ZMYM3	Q14202	1370 aa		13.83	□□□□□ -0.19
NDRG1-208	ENST00000518094	ZNF142	P52746	1687 aa	Predicted RBP	13.83	□□□□□ -0.2
NDRG1-208	ENST00000518094	CNTLN	Q9NXG0	1405 aa		13.82	□□□□□ -0.2
NDRG1-208	ENST00000518094	TOM1	O60784	492 aa		13.82	□□□□□ -0.2
NDRG1-208	ENST00000518094	KIF14	Q15058	1648 aa		13.82	□□□□□ -0.2
NDRG1-208	ENST00000518094	PPP6R1	Q9UPN7	881 aa		13.81	□□□□□ -0.2
NDRG1-208	ENST00000518094	MYO3A	Q8NEV4	1616 aa		13.81	□□□□□ -0.2
NDRG1-208	ENST00000518094	MROH2A	A6NES4	1674 aa		13.81	□□□□□ -0.2
NDRG1-208	ENST00000518094	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.8	□□□□□ -0.2
NDRG1-208	ENST00000518094	ESF1	Q9H501	851 aa	Known RBP	13.8	□□□□□ -0.2
NDRG1-208	ENST00000518094	KIDINS220	Q9ULH0	1771 aa		13.79	□□□□□ -0.2
NDRG1-208	ENST00000518094	MYT1L	Q9UL68	1186 aa		13.78	□□□□□ -0.2
NDRG1-208	ENST00000518094	PTPRK	Q15262	1439 aa		13.78	□□□□□ -0.2
NDRG1-208	ENST00000518094	SHANK2	Q9UPX8	1470 aa		13.78	□□□□□ -0.2
NDRG1-208	ENST00000518094	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.78	□□□□□ -0.2
NDRG1-208	ENST00000518094	CPS1	P31327	1500 aa		13.77	□□□□□ -0.21
NDRG1-208	ENST00000518094	ARHGAP5	Q13017	1502 aa		13.77	□□□□□ -0.21
NDRG1-208	ENST00000518094	POTEA	Q6S8J7	498 aa		13.77	□□□□□ -0.21
NDRG1-208	ENST00000518094	NEURL4	Q96JN8	1562 aa		13.77	□□□□□ -0.21
NDRG1-208	ENST00000518094	CDC42BPB	Q9Y5S2	1711 aa		13.76	□□□□□ -0.21
NDRG1-208	ENST00000518094	SENP3	Q9H4L4	574 aa	Predicted RBP	13.76	□□□□□ -0.21
NDRG1-208	ENST00000518094	CLTC	Q00610	1675 aa	Known RBP	13.75	□□□□□ -0.21
NDRG1-208	ENST00000518094	VWDE	Q8N2E2	1590 aa		13.75	□□□□□ -0.21
NDRG1-208	ENST00000518094	DNMT1	P26358	1616 aa	Known RBP	13.74	□□□□□ -0.21
NDRG1-208	ENST00000518094	ABCC1	P33527	1531 aa		13.73	□□□□□ -0.21
NDRG1-208	ENST00000518094	CSRNP3	Q8WYN3	585 aa		13.72	□□□□□ -0.21
NDRG1-208	ENST00000518094	ITSN2	Q9NZM3	1697 aa		13.71	□□□□□ -0.21
NDRG1-208	ENST00000518094	STRCP1	A6NGW2	1772 aa		13.7	□□□□□ -0.22
NDRG1-208	ENST00000518094	A2ML1	A8K2U0	1454 aa		13.69	□□□□□ -0.22
NDRG1-208	ENST00000518094	POLR1A	O95602	1720 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-208	ENST00000518094	TRO	Q12816	1431 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-208	ENST00000518094	SRCAP	Q6ZRS2	3230 aa		13.68	□□□□□ -0.22
NDRG1-208	ENST00000518094	SETD1A	O15047	1707 aa	Known RBP	13.67	□□□□□ -0.22
NDRG1-208	ENST00000518094	SAMD9L	Q8IVG5	1584 aa		13.67	□□□□□ -0.22
NDRG1-208	ENST00000518094	LRRC7	Q96NW7	1537 aa		13.66	□□□□□ -0.22
NDRG1-208	ENST00000518094	LRRIQ1	Q96JM4	1722 aa		13.66	□□□□□ -0.22
NDRG1-208	ENST00000518094	PREX2	Q70Z35	1606 aa		13.65	□□□□□ -0.22
NDRG1-208	ENST00000518094	PLXNC1	O60486	1568 aa		13.65	□□□□□ -0.22
NDRG1-208	ENST00000518094	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.64	□□□□□ -0.23
NDRG1-208	ENST00000518094	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.63	□□□□□ -0.23
NDRG1-208	ENST00000518094	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
NDRG1-208	ENST00000518094	MED14	O60244	1454 aa		13.61	□□□□□ -0.23
NDRG1-208	ENST00000518094	GGT6	Q6P531	493 aa		13.61	□□□□□ -0.23
NDRG1-208	ENST00000518094	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.61	□□□□□ -0.23
NDRG1-208	ENST00000518094	RNF17	Q9BXT8	1623 aa	Known RBP	13.6	□□□□□ -0.23
NDRG1-208	ENST00000518094	CDC42BPA	Q5VT25	1732 aa		13.59	□□□□□ -0.23
NDRG1-208	ENST00000518094	NPHP4	O75161	1426 aa	Predicted RBP	13.59	□□□□□ -0.23
NDRG1-208	ENST00000518094	A2M	P01023	1474 aa		13.59	□□□□□ -0.23
NDRG1-208	ENST00000518094	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NDRG1-208	ENST00000518094	ANKLE2	Q86XL3	938 aa		13.58	□□□□□ -0.24
NDRG1-208	ENST00000518094	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
NDRG1-208	ENST00000518094	SPAG9	O60271	1321 aa	Known RBP	13.58	□□□□□ -0.24
NDRG1-208	ENST00000518094	DEPDC5	O75140	1603 aa		13.57	□□□□□ -0.24
NDRG1-208	ENST00000518094	CLIP1	P30622	1438 aa		13.57	□□□□□ -0.24
NDRG1-208	ENST00000518094	ATP7A	Q04656	1500 aa		13.57	□□□□□ -0.24

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