RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 ERCC6Q03468 1493 aa3.79□□□□□ -1.8
SCARNA16.3-201ENST00000516595 MRC2Q9UBG0 1479 aa3.79□□□□□ -1.8
SCARNA16.3-201ENST00000516595 MS4A3Q96HJ5 214 aa3.79□□□□□ -1.8
SCARNA16.3-201ENST00000516595 CUX2O14529 1486 aa3.79□□□□□ -1.8
SCARNA16.3-201ENST00000516595 KIF21AQ7Z4S6 1674 aa3.78□□□□□ -1.8
SCARNA16.3-201ENST00000516595 DNMBPQ6XZF7 1577 aa3.78□□□□□ -1.8
SCARNA16.3-201ENST00000516595 PHF8Q9UPP1 1060 aa3.78□□□□□ -1.8
SCARNA16.3-201ENST00000516595 URB2Q14146 1524 aaKnown RBP3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TOPBP1Q92547 1522 aa3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 NBR1Q14596 966 aa3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 MFRPQ9BY79 579 aa3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TRPC6Q9Y210 931 aa3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 WRNQ14191 1432 aaPredicted RBP eCLIP3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TOP2BQ02880 1626 aa3.77□□□□□ -1.81
SCARNA16.3-201ENST00000516595 CUX1P39880 1505 aa3.76□□□□□ -1.81
SCARNA16.3-201ENST00000516595 GALR2O43603 387 aaPredicted RBP3.76□□□□□ -1.81
SCARNA16.3-201ENST00000516595 CLCN6P51797 869 aa3.76□□□□□ -1.81
SCARNA16.3-201ENST00000516595 WDR97A6NE52 1622 aa3.76□□□□□ -1.81
SCARNA16.3-201ENST00000516595 BIVM-ERCC5R4GMW8 1640 aa3.76□□□□□ -1.81
SCARNA16.3-201ENST00000516595 POLA1P09884 1462 aaPredicted RBP3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TTLL13PA6NNM8 815 aa3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 PPP1R37O75864 691 aa3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TIE1P35590 1138 aa3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TRIM35Q9UPQ4 493 aa3.75□□□□□ -1.81
SCARNA16.3-201ENST00000516595 IFT140Q96RY7 1462 aa3.74□□□□□ -1.81
SCARNA16.3-201ENST00000516595 G3V3G9 751 aa3.74□□□□□ -1.81
SCARNA16.3-201ENST00000516595 SYNJ1O43426 1573 aa3.74□□□□□ -1.81
SCARNA16.3-201ENST00000516595 DCBLD2Q96PD2 775 aa3.74□□□□□ -1.81
SCARNA16.3-201ENST00000516595 FGD5Q6ZNL6 1462 aa3.73□□□□□ -1.81
SCARNA16.3-201ENST00000516595 CADPS2Q86UW7 1296 aa3.73□□□□□ -1.81
SCARNA16.3-201ENST00000516595 FBXO22Q8NEZ5 403 aa3.73□□□□□ -1.81
SCARNA16.3-201ENST00000516595 BMP2KQ9NSY1 1161 aaPredicted RBP3.73□□□□□ -1.81
SCARNA16.3-201ENST00000516595 ABCA10Q8WWZ4 1543 aa3.73□□□□□ -1.81
SCARNA16.3-201ENST00000516595 GABBR2O75899 941 aa3.72□□□□□ -1.81
SCARNA16.3-201ENST00000516595 SEC24BO95487 1268 aa3.72□□□□□ -1.81
SCARNA16.3-201ENST00000516595 PDE4AP27815 886 aa3.72□□□□□ -1.81
SCARNA16.3-201ENST00000516595 LARP6Q9BRS8 491 aaKnown RBP3.72□□□□□ -1.81
SCARNA16.3-201ENST00000516595 TARBP1Q13395 1621 aaKnown RBP3.72□□□□□ -1.81
SCARNA16.3-201ENST00000516595 ATN1P54259 1190 aaPredicted RBP3.71□□□□□ -1.82
SCARNA16.3-201ENST00000516595 SOGA1O94964 1423 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ABCA5Q8WWZ7 1642 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ATMINO43313 823 aaPredicted RBP3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 PLCG2P16885 1265 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 DPY19L2Q6NUT2 758 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 P3H3Q8IVL6 736 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 MS4A4AQ96JQ5 239 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 EEA1Q15075 1411 aa3.7□□□□□ -1.82
SCARNA16.3-201ENST00000516595 EIF4G3O43432 1585 aaKnown RBP3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 RAD54L2Q9Y4B4 1467 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 PRKCSHP14314 528 aaPredicted RBP3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 E2F4Q16254 413 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 TPRNQ4KMQ1 711 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 OCEL1Q9H607 264 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ERICH3Q5RHP9 1530 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ZNF608Q9ULD9 1512 aaPredicted RBP3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 KIF27Q86VH2 1401 aa3.69□□□□□ -1.82
SCARNA16.3-201ENST00000516595 GRIN2BQ13224 1484 aa3.68□□□□□ -1.82
SCARNA16.3-201ENST00000516595 GAPVD1Q14C86 1478 aa3.68□□□□□ -1.82
SCARNA16.3-201ENST00000516595 MAGI1Q96QZ7 1491 aaPredicted RBP3.68□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ASTLQ6HA08 431 aaPredicted RBP3.68□□□□□ -1.82
SCARNA16.3-201ENST00000516595 TMC2Q8TDI7 906 aa3.68□□□□□ -1.82
SCARNA16.3-201ENST00000516595 TULP1O00294 542 aaPredicted RBP3.67□□□□□ -1.82
SCARNA16.3-201ENST00000516595 IER5LQ5T953 404 aa3.67□□□□□ -1.82
SCARNA16.3-201ENST00000516595 DDX27Q96GQ7 796 aaKnown RBP3.67□□□□□ -1.82
SCARNA16.3-201ENST00000516595 L3MBTL3Q96JM7 780 aaPredicted RBP3.67□□□□□ -1.82
SCARNA16.3-201ENST00000516595 TDRD9Q8NDG6 1382 aaKnown RBP3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 CUL7Q14999 1698 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 IRX5P78411 483 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 KCNV2Q8TDN2 545 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 SLC39A7Q92504 469 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 BOLA1Q9Y3E2 137 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 FHAD1B1AJZ9 1412 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 ADAMTS12P58397 1594 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 NCKAP5LQ9HCH0 1330 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 SYNJ2O15056 1496 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 AQRO60306 1485 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 SNAPC4Q5SXM2 1469 aa3.66□□□□□ -1.82
SCARNA16.3-201ENST00000516595 PBRM1Q86U86 1689 aa3.65□□□□□ -1.82
SCARNA16.3-201ENST00000516595 IGF1RP08069 1367 aa3.65□□□□□ -1.82
SCARNA16.3-201ENST00000516595 POTEMA6NI47 508 aa3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 C7P10643 843 aa3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 MICALL2Q8IY33 904 aa3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 PELP1Q8IZL8 1130 aaKnown RBP3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 ARHGEF1Q92888 912 aaKnown RBP3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 GPHNQ9NQX3 736 aaPredicted RBP3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 PRXQ9BXM0 1461 aa3.65□□□□□ -1.83
SCARNA16.3-201ENST00000516595 PPP1R15BQ5SWA1 713 aa3.64□□□□□ -1.83
SCARNA16.3-201ENST00000516595 PDCD7Q8N8D1 485 aaKnown RBP3.64□□□□□ -1.83
SCARNA16.3-201ENST00000516595 KIF21BO75037 1637 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 NUP160Q12769 1436 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 GRIN2AQ12879 1464 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 RAPGEF2Q9Y4G8 1499 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 SMYD5Q6GMV2 418 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 ILDR1Q86SU0 546 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 CRISPLD2Q9H0B8 497 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 METRNQ9UJH8 293 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 COLQQ9Y215 455 aaPredicted RBP3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 RUSC2Q8N2Y8 1516 aa3.63□□□□□ -1.83
SCARNA16.3-201ENST00000516595 CARMIL1Q5VZK9 1371 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms