RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
TNPO1-210ENST00000515483 SCAPERQ9BY12 1400 aa25.2■■□□□ 1.63
TNPO1-210ENST00000515483 HECW1Q76N89 1606 aa25.2■■□□□ 1.62
TNPO1-210ENST00000515483 ARHGEF12Q9NZN5 1544 aa25.2■■□□□ 1.62
TNPO1-210ENST00000515483 ATP10AO60312 1499 aa25.2■■□□□ 1.62
TNPO1-210ENST00000515483 RANGAP1P46060 587 aaPredicted RBP25.19■■□□□ 1.62
TNPO1-210ENST00000515483 CEBPAP49715 358 aaPredicted RBP25.19■■□□□ 1.62
TNPO1-210ENST00000515483 PREX1Q8TCU6 1659 aa25.19■■□□□ 1.62
TNPO1-210ENST00000515483 C9orf84Q5VXU9 1444 aa25.17■■□□□ 1.62
TNPO1-210ENST00000515483 UHRF1BP1Q6BDS2 1440 aa25.15■■□□□ 1.62
TNPO1-210ENST00000515483 PLCH2O75038 1416 aa25.14■■□□□ 1.62
TNPO1-210ENST00000515483 SPATA31D1Q6ZQQ2 1576 aa25.14■■□□□ 1.61
TNPO1-210ENST00000515483 EFCAB2Q5VUJ9 269 aa25.11■■□□□ 1.61
TNPO1-210ENST00000515483 PTPRTO14522 1441 aa25.11■■□□□ 1.61
TNPO1-210ENST00000515483 STRCQ7RTU9 1775 aa25.1■■□□□ 1.61
TNPO1-210ENST00000515483 SETD1BQ9UPS6 1966 aaKnown RBP25.07■■□□□ 1.6
TNPO1-210ENST00000515483 MYT1LQ9UL68 1186 aa25.02■■□□□ 1.6
TNPO1-210ENST00000515483 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
TNPO1-210ENST00000515483 ZNF518AQ6AHZ1 1483 aa25.01■■□□□ 1.59
TNPO1-210ENST00000515483 ESF1Q9H501 851 aaKnown RBP25■■□□□ 1.59
TNPO1-210ENST00000515483 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
TNPO1-210ENST00000515483 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
TNPO1-210ENST00000515483 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
TNPO1-210ENST00000515483 LTBP4Q8N2S1 1624 aa24.96■■□□□ 1.59
TNPO1-210ENST00000515483 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
TNPO1-210ENST00000515483 EEA1Q15075 1411 aa24.94■■□□□ 1.58
TNPO1-210ENST00000515483 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
TNPO1-210ENST00000515483 KDM5CP41229 1560 aa24.91■■□□□ 1.58
TNPO1-210ENST00000515483 MYO5CQ9NQX4 1742 aa24.9■■□□□ 1.58
TNPO1-210ENST00000515483 NCOA1Q15788 1441 aa24.9■■□□□ 1.58
TNPO1-210ENST00000515483 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
TNPO1-210ENST00000515483 ARHGAP5Q13017 1502 aa24.87■■□□□ 1.57
TNPO1-210ENST00000515483 DIP2CQ9Y2E4 1556 aa24.87■■□□□ 1.57
TNPO1-210ENST00000515483 C3P01024 1663 aa24.87■■□□□ 1.57
TNPO1-210ENST00000515483 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
TNPO1-210ENST00000515483 MLH3Q9UHC1 1453 aa24.85■■□□□ 1.57
TNPO1-210ENST00000515483 AGLP35573 1532 aa24.85■■□□□ 1.57
TNPO1-210ENST00000515483 UBAP1LF5GYI3 381 aa24.84■■□□□ 1.57
TNPO1-210ENST00000515483 FMN1Q68DA7 1419 aa24.84■■□□□ 1.57
TNPO1-210ENST00000515483 CLIP1P30622 1438 aa24.81■■□□□ 1.56
TNPO1-210ENST00000515483 TROQ12816 1431 aaPredicted RBP24.81■■□□□ 1.56
TNPO1-210ENST00000515483 KIF14Q15058 1648 aa24.81■■□□□ 1.56
TNPO1-210ENST00000515483 NPATQ14207 1427 aa24.78■■□□□ 1.56
TNPO1-210ENST00000515483 ABCA6Q8N139 1617 aa24.77■■□□□ 1.56
TNPO1-210ENST00000515483 ZNF335Q9H4Z2 1342 aaPredicted RBP24.77■■□□□ 1.56
TNPO1-210ENST00000515483 CAMSAP1Q5T5Y3 1602 aa24.76■■□□□ 1.55
TNPO1-210ENST00000515483 NCKAP5LQ9HCH0 1330 aa24.76■■□□□ 1.55
TNPO1-210ENST00000515483 PKD2Q13563 968 aa24.74■■□□□ 1.55
TNPO1-210ENST00000515483 ZMYM3Q14202 1370 aa24.71■■□□□ 1.55
TNPO1-210ENST00000515483 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
TNPO1-210ENST00000515483 ABCC1P33527 1531 aa24.67■■□□□ 1.54
TNPO1-210ENST00000515483 PLA2R1Q13018 1463 aa24.66■■□□□ 1.54
TNPO1-210ENST00000515483 CDC42BPBQ9Y5S2 1711 aa24.65■■□□□ 1.54
TNPO1-210ENST00000515483 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.54
TNPO1-210ENST00000515483 MROH2AA6NES4 1674 aa24.63■■□□□ 1.53
TNPO1-210ENST00000515483 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
TNPO1-210ENST00000515483 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
TNPO1-210ENST00000515483 PREX2Q70Z35 1606 aa24.61■■□□□ 1.53
TNPO1-210ENST00000515483 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
TNPO1-210ENST00000515483 ITSN2Q9NZM3 1697 aa24.6■■□□□ 1.53
TNPO1-210ENST00000515483 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
TNPO1-210ENST00000515483 HSPA1LP34931 641 aa24.6■■□□□ 1.53
TNPO1-210ENST00000515483 TOM1O60784 492 aa24.59■■□□□ 1.53
TNPO1-210ENST00000515483 SPAG9O60271 1321 aaKnown RBP24.59■■□□□ 1.53
TNPO1-210ENST00000515483 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.53
TNPO1-210ENST00000515483 PIP4K2BP78356 416 aa24.57■■□□□ 1.52
TNPO1-210ENST00000515483 PTPRKQ15262 1439 aa24.55■■□□□ 1.52
TNPO1-210ENST00000515483 ZNF777Q9ULD5 760 aaPredicted RBP24.55■■□□□ 1.52
TNPO1-210ENST00000515483 MED1Q15648 1581 aaPredicted RBP24.54■■□□□ 1.52
TNPO1-210ENST00000515483 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
TNPO1-210ENST00000515483 CEP170BQ9Y4F5 1589 aaPredicted RBP24.54■■□□□ 1.52
TNPO1-210ENST00000515483 ZNF142P52746 1687 aaPredicted RBP24.53■■□□□ 1.52
TNPO1-210ENST00000515483 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
TNPO1-210ENST00000515483 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
TNPO1-210ENST00000515483 GGT6Q6P531 493 aa24.51■■□□□ 1.51
TNPO1-210ENST00000515483 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
TNPO1-210ENST00000515483 HNRNPMP52272 730 aaKnown RBP eCLIP24.49■■□□□ 1.519e-6■■■■□ 22.2
TNPO1-210ENST00000515483 CLTCQ00610 1675 aaKnown RBP24.48■■□□□ 1.51
TNPO1-210ENST00000515483 SUPT6HQ7KZ85 1726 aaKnown RBP24.47■■□□□ 1.51
TNPO1-210ENST00000515483 LRRIQ1Q96JM4 1722 aa24.47■■□□□ 1.51
TNPO1-210ENST00000515483 A2MP01023 1474 aa24.47■■□□□ 1.51
TNPO1-210ENST00000515483 CPS1P31327 1500 aa24.46■■□□□ 1.51
TNPO1-210ENST00000515483 A2ML1A8K2U0 1454 aa24.45■■□□□ 1.51
TNPO1-210ENST00000515483 CASKIN1Q8WXD9 1431 aa24.45■■□□□ 1.51
TNPO1-210ENST00000515483 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
TNPO1-210ENST00000515483 CDC42BPAQ5VT25 1732 aa24.44■■□□□ 1.5
TNPO1-210ENST00000515483 ATP7AQ04656 1500 aa24.44■■□□□ 1.5
TNPO1-210ENST00000515483 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
TNPO1-210ENST00000515483 PLXNC1O60486 1568 aa24.42■■□□□ 1.5
TNPO1-210ENST00000515483 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
TNPO1-210ENST00000515483 PLEKHH2Q8IVE3 1493 aa24.41■■□□□ 1.5
TNPO1-210ENST00000515483 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
TNPO1-210ENST00000515483 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
TNPO1-210ENST00000515483 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
TNPO1-210ENST00000515483 ANKLE2Q86XL3 938 aa24.37■■□□□ 1.49
TNPO1-210ENST00000515483 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
TNPO1-210ENST00000515483 TNRQ92752 1358 aa24.34■■□□□ 1.49
TNPO1-210ENST00000515483 THEMISQ8N1K5 641 aaPredicted RBP24.32■■□□□ 1.48
TNPO1-210ENST00000515483 CCNB3Q8WWL7 1395 aa24.31■■□□□ 1.48
TNPO1-210ENST00000515483 NEURL4Q96JN8 1562 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms