RNA–Protein interactions for RNA: ENST00000515351.1

PCDH1-208, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 2,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-208ENST00000515351 CCER2I3L3R5 266 aa21.18■□□□□ 0.98
PCDH1-208ENST00000515351 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
PCDH1-208ENST00000515351 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
PCDH1-208ENST00000515351 ANP32CO43423 234 aa21.17■□□□□ 0.98
PCDH1-208ENST00000515351 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
PCDH1-208ENST00000515351 PLB1Q6P1J6 1458 aa21.15■□□□□ 0.98
PCDH1-208ENST00000515351 ZNF644Q9H582 1327 aaPredicted RBP21.14■□□□□ 0.98
PCDH1-208ENST00000515351 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
PCDH1-208ENST00000515351 NUP160Q12769 1436 aa21.14■□□□□ 0.97
PCDH1-208ENST00000515351 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.97
PCDH1-208ENST00000515351 KIF14Q15058 1648 aa21.12■□□□□ 0.97
PCDH1-208ENST00000515351 CAMSAP2Q08AD1 1489 aa21.12■□□□□ 0.97
PCDH1-208ENST00000515351 CROCC2H7BZ55 1655 aa21.11■□□□□ 0.97
PCDH1-208ENST00000515351 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
PCDH1-208ENST00000515351 ANKRD30BQ9BXX2 1392 aa21.09■□□□□ 0.97
PCDH1-208ENST00000515351 RPRD2Q5VT52 1461 aaKnown RBP21.09■□□□□ 0.97
PCDH1-208ENST00000515351 GPATCH8Q9UKJ3 1502 aaKnown RBP21.08■□□□□ 0.97
PCDH1-208ENST00000515351 FBLN2P98095 1184 aa21.06■□□□□ 0.96
PCDH1-208ENST00000515351 FOXD1Q16676 465 aa21.06■□□□□ 0.96
PCDH1-208ENST00000515351 HSPA5P11021 654 aaKnown RBP21.05■□□□□ 0.96
PCDH1-208ENST00000515351 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
PCDH1-208ENST00000515351 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
PCDH1-208ENST00000515351 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
PCDH1-208ENST00000515351 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
PCDH1-208ENST00000515351 ABCA8O94911 1581 aa21.04■□□□□ 0.96
PCDH1-208ENST00000515351 CDC42BPAQ5VT25 1732 aa21.04■□□□□ 0.96
PCDH1-208ENST00000515351 ADGRL2O95490 1459 aa21.03■□□□□ 0.96
PCDH1-208ENST00000515351 EIF4G2P78344 907 aaKnown RBP eCLIP21.02■□□□□ 0.96
PCDH1-208ENST00000515351 WASHC2AQ641Q2 1341 aa21.02■□□□□ 0.96
PCDH1-208ENST00000515351 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
PCDH1-208ENST00000515351 PZPP20742 1482 aa21.01■□□□□ 0.95
PCDH1-208ENST00000515351 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
PCDH1-208ENST00000515351 POLR1AO95602 1720 aaPredicted RBP20.98■□□□□ 0.95
PCDH1-208ENST00000515351 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
PCDH1-208ENST00000515351 ATP10BO94823 1461 aa20.94■□□□□ 0.94
PCDH1-208ENST00000515351 ZNF777Q9ULD5 760 aaPredicted RBP20.94■□□□□ 0.94
PCDH1-208ENST00000515351 CNTLNQ9NXG0 1405 aa20.94■□□□□ 0.94
PCDH1-208ENST00000515351 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
PCDH1-208ENST00000515351 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
PCDH1-208ENST00000515351 SHANK2Q9UPX8 1470 aa20.92■□□□□ 0.94
PCDH1-208ENST00000515351 PLEKHD1A6NEE1 506 aa20.92■□□□□ 0.94
PCDH1-208ENST00000515351 KIAA1107Q9UPP5 1409 aa20.91■□□□□ 0.94
PCDH1-208ENST00000515351 CCDC7Q96M83 1385 aa20.89■□□□□ 0.94
PCDH1-208ENST00000515351 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.93
PCDH1-208ENST00000515351 MBD5Q9P267 1494 aa20.88■□□□□ 0.93
PCDH1-208ENST00000515351 ANKRD50Q9ULJ7 1429 aa20.88■□□□□ 0.93
PCDH1-208ENST00000515351 C11orf95C9JLR9 678 aaPredicted RBP20.87■□□□□ 0.93
PCDH1-208ENST00000515351 FKBP8Q14318 412 aa20.87■□□□□ 0.93
PCDH1-208ENST00000515351 C9orf84Q5VXU9 1444 aa20.86■□□□□ 0.93
PCDH1-208ENST00000515351 CHD1O14646 1710 aa20.84■□□□□ 0.93
PCDH1-208ENST00000515351 ARHGEF5Q12774 1597 aa20.83■□□□□ 0.93
PCDH1-208ENST00000515351 PKD2Q13563 968 aa20.82■□□□□ 0.92
PCDH1-208ENST00000515351 CDC42BPBQ9Y5S2 1711 aa20.82■□□□□ 0.92
PCDH1-208ENST00000515351 KDM5DQ9BY66 1539 aa20.82■□□□□ 0.92
PCDH1-208ENST00000515351 NEFLP07196 543 aa20.81■□□□□ 0.92
PCDH1-208ENST00000515351 PTPRGP23470 1445 aa20.81■□□□□ 0.92
PCDH1-208ENST00000515351 PREX2Q70Z35 1606 aa20.8■□□□□ 0.92
PCDH1-208ENST00000515351 BCANQ96GW7 911 aa20.79■□□□□ 0.92
PCDH1-208ENST00000515351 KIF7Q2M1P5 1343 aa20.79■□□□□ 0.92
PCDH1-208ENST00000515351 HNRNPUQ00839 825 aaKnown RBP eCLIP20.78■□□□□ 0.92
PCDH1-208ENST00000515351 SAMD9LQ8IVG5 1584 aa20.77■□□□□ 0.92
PCDH1-208ENST00000515351 PRKRIP1Q9H875 184 aaPredicted RBP20.77■□□□□ 0.91
PCDH1-208ENST00000515351 TSPY4P0CV99 314 aa20.76■□□□□ 0.91
PCDH1-208ENST00000515351 TSPY10P0CW01 314 aa20.76■□□□□ 0.91
PCDH1-208ENST00000515351 TSHZ2Q9NRE2 1034 aa20.76■□□□□ 0.91
PCDH1-208ENST00000515351 NUP155O75694 1391 aa20.76■□□□□ 0.91
PCDH1-208ENST00000515351 SHROOM2Q13796 1616 aa20.76■□□□□ 0.91
PCDH1-208ENST00000515351 KDM5CP41229 1560 aa20.75■□□□□ 0.91
PCDH1-208ENST00000515351 BCORL1Q5H9F3 1711 aa20.75■□□□□ 0.91
PCDH1-208ENST00000515351 KIF15Q9NS87 1388 aa20.74■□□□□ 0.91
PCDH1-208ENST00000515351 ARHGEF12Q9NZN5 1544 aa20.73■□□□□ 0.91
PCDH1-208ENST00000515351 CCDC141Q6ZP82 1450 aa20.72■□□□□ 0.91
PCDH1-208ENST00000515351 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
PCDH1-208ENST00000515351 CCDC184Q52MB2 194 aa20.72■□□□□ 0.91
PCDH1-208ENST00000515351 USP47Q96K76 1375 aa20.72■□□□□ 0.91
PCDH1-208ENST00000515351 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.91
PCDH1-208ENST00000515351 RALGAPBQ86X10 1494 aa20.69■□□□□ 0.9
PCDH1-208ENST00000515351 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
PCDH1-208ENST00000515351 ZNF326Q5BKZ1 582 aaKnown RBP20.67■□□□□ 0.9
PCDH1-208ENST00000515351 MAST1Q9Y2H9 1570 aa20.66■□□□□ 0.9
PCDH1-208ENST00000515351 MYO5CQ9NQX4 1742 aa20.66■□□□□ 0.9
PCDH1-208ENST00000515351 RSPH4AQ5TD94 716 aa20.65■□□□□ 0.9
PCDH1-208ENST00000515351 MRS2Q9HD23 443 aa20.65■□□□□ 0.9
PCDH1-208ENST00000515351 FAM135AQ9P2D6 1515 aa20.65■□□□□ 0.9
PCDH1-208ENST00000515351 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
PCDH1-208ENST00000515351 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.64■□□□□ 0.9
PCDH1-208ENST00000515351 ARID4BQ4LE39 1312 aaPredicted RBP20.64■□□□□ 0.89
PCDH1-208ENST00000515351 DHX29Q7Z478 1369 aaKnown RBP20.63■□□□□ 0.89
PCDH1-208ENST00000515351 ARHGAP5Q13017 1502 aa20.63■□□□□ 0.89
PCDH1-208ENST00000515351 ABCC2Q92887 1545 aa20.63■□□□□ 0.89
PCDH1-208ENST00000515351 UNC13BO14795 1591 aa20.62■□□□□ 0.89
PCDH1-208ENST00000515351 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
PCDH1-208ENST00000515351 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
PCDH1-208ENST00000515351 PLXNC1O60486 1568 aa20.6■□□□□ 0.89
PCDH1-208ENST00000515351 ZBED9Q6R2W3 1325 aa20.58■□□□□ 0.88
PCDH1-208ENST00000515351 CARD11Q9BXL7 1154 aa20.56■□□□□ 0.88
PCDH1-208ENST00000515351 MYT1Q01538 1121 aa20.56■□□□□ 0.88
PCDH1-208ENST00000515351 ROCK2O75116 1388 aaKnown RBP20.56■□□□□ 0.88
PCDH1-208ENST00000515351 PLEKHH2Q8IVE3 1493 aa20.56■□□□□ 0.88
PCDH1-208ENST00000515351 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms