RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
CPNE4-212ENST00000514999 CADPSQ9ULU8 1353 aa10.3□□□□□ -0.76
CPNE4-212ENST00000514999 WDR62O43379 1518 aa10.28□□□□□ -0.76
CPNE4-212ENST00000514999 MROH2BQ7Z745 1585 aa10.28□□□□□ -0.76
CPNE4-212ENST00000514999 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
CPNE4-212ENST00000514999 NEUROD1Q13562 356 aa10.27□□□□□ -0.77
CPNE4-212ENST00000514999 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.77
CPNE4-212ENST00000514999 PSEN1P49768 467 aa10.26□□□□□ -0.77
CPNE4-212ENST00000514999 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
CPNE4-212ENST00000514999 L3MBTL3Q96JM7 780 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-212ENST00000514999 CLSPNQ9HAW4 1339 aa10.25□□□□□ -0.77
CPNE4-212ENST00000514999 CEP164Q9UPV0 1460 aa10.24□□□□□ -0.77
CPNE4-212ENST00000514999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPNE4-212ENST00000514999 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
CPNE4-212ENST00000514999 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-212ENST00000514999 MARVELD3Q96A59 401 aa10.23□□□□□ -0.77
CPNE4-212ENST00000514999 DIEXFQ68CQ4 756 aaKnown RBP10.21□□□□□ -0.77
CPNE4-212ENST00000514999 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
CPNE4-212ENST00000514999 FANCD2Q9BXW9 1451 aa10.2□□□□□ -0.78
CPNE4-212ENST00000514999 RIMBP3CA6NJZ7 1639 aa10.19□□□□□ -0.78
CPNE4-212ENST00000514999 RIMBP3BA6NNM3 1639 aa10.19□□□□□ -0.78
CPNE4-212ENST00000514999 RIMBP3Q9UFD9 1639 aa10.19□□□□□ -0.78
CPNE4-212ENST00000514999 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
CPNE4-212ENST00000514999 MMRN1Q13201 1228 aa10.18□□□□□ -0.78
CPNE4-212ENST00000514999 IFNLR1Q8IU57 520 aaPredicted RBP10.18□□□□□ -0.78
CPNE4-212ENST00000514999 WIZO95785 1651 aa10.18□□□□□ -0.78
CPNE4-212ENST00000514999 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
CPNE4-212ENST00000514999 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
CPNE4-212ENST00000514999 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
CPNE4-212ENST00000514999 CYB5RLQ6IPT4 315 aa10.15□□□□□ -0.78
CPNE4-212ENST00000514999 CABP2Q9NPB3 220 aa10.13□□□□□ -0.79
CPNE4-212ENST00000514999 CIZ1Q9ULV3 898 aaPredicted RBP10.13□□□□□ -0.79
CPNE4-212ENST00000514999 EMP3P54852 163 aa10.12□□□□□ -0.79
CPNE4-212ENST00000514999 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
CPNE4-212ENST00000514999 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
CPNE4-212ENST00000514999 ARHGEF11O15085 1522 aa10.11□□□□□ -0.79
CPNE4-212ENST00000514999 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
CPNE4-212ENST00000514999 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
CPNE4-212ENST00000514999 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
CPNE4-212ENST00000514999 CFTRP13569 1480 aa10.09□□□□□ -0.79
CPNE4-212ENST00000514999 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
CPNE4-212ENST00000514999 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
CPNE4-212ENST00000514999 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
CPNE4-212ENST00000514999 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-212ENST00000514999 HOXB3P14651 431 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-212ENST00000514999 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-212ENST00000514999 IFT140Q96RY7 1462 aa10.04□□□□□ -0.8
CPNE4-212ENST00000514999 G3V3G9 751 aa10.04□□□□□ -0.8
CPNE4-212ENST00000514999 WRNQ14191 1432 aaPredicted RBP eCLIP10.01□□□□□ -0.81
CPNE4-212ENST00000514999 EFCAB3Q8N7B9 438 aa10.01□□□□□ -0.81
CPNE4-212ENST00000514999 RSF1Q96T23 1441 aaPredicted RBP10□□□□□ -0.81
CPNE4-212ENST00000514999 CHD1O14646 1710 aa9.99□□□□□ -0.81
CPNE4-212ENST00000514999 PRDM2Q13029 1718 aa9.99□□□□□ -0.81
CPNE4-212ENST00000514999 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-212ENST00000514999 TOP2AP11388 1531 aaKnown RBP9.98□□□□□ -0.81
CPNE4-212ENST00000514999 EIF4G3O43432 1585 aaKnown RBP9.98□□□□□ -0.81
CPNE4-212ENST00000514999 ARAP1Q96P48 1450 aa9.98□□□□□ -0.81
CPNE4-212ENST00000514999 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
CPNE4-212ENST00000514999 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
CPNE4-212ENST00000514999 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.82
CPNE4-212ENST00000514999 AQRO60306 1485 aaKnown RBP eCLIP9.96□□□□□ -0.82
CPNE4-212ENST00000514999 TOPBP1Q92547 1522 aa9.96□□□□□ -0.82
CPNE4-212ENST00000514999 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
CPNE4-212ENST00000514999 TMEM92Q6UXU6 159 aa9.92□□□□□ -0.82
CPNE4-212ENST00000514999 FAM9AQ8IZU1 332 aaPredicted RBP9.92□□□□□ -0.82
CPNE4-212ENST00000514999 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
CPNE4-212ENST00000514999 ERBB3P21860 1342 aa9.9□□□□□ -0.82
CPNE4-212ENST00000514999 DNMBPQ6XZF7 1577 aa9.9□□□□□ -0.82
CPNE4-212ENST00000514999 SOX12O15370 315 aa9.9□□□□□ -0.82
CPNE4-212ENST00000514999 CCDC88BA6NC98 1476 aa9.9□□□□□ -0.83
CPNE4-212ENST00000514999 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
CPNE4-212ENST00000514999 MS4A4AQ96JQ5 239 aa9.89□□□□□ -0.83
CPNE4-212ENST00000514999 BCL11AQ9H165 835 aa9.89□□□□□ -0.83
CPNE4-212ENST00000514999 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
CPNE4-212ENST00000514999 RIMBP2O15034 1052 aa9.88□□□□□ -0.83
CPNE4-212ENST00000514999 CHMP7Q8WUX9 453 aaPredicted RBP9.88□□□□□ -0.83
CPNE4-212ENST00000514999 YTHDC1Q96MU7 727 aaKnown RBP9.88□□□□□ -0.83
CPNE4-212ENST00000514999 TARBP1Q13395 1621 aaKnown RBP9.88□□□□□ -0.83
CPNE4-212ENST00000514999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.86□□□□□ -0.83
CPNE4-212ENST00000514999 EEA1Q15075 1411 aa9.86□□□□□ -0.83
CPNE4-212ENST00000514999 ZFP91Q96JP5 570 aaPredicted RBP9.86□□□□□ -0.83
CPNE4-212ENST00000514999 ZSWIM6Q9HCJ5 1215 aa9.86□□□□□ -0.83
CPNE4-212ENST00000514999 TDRD9Q8NDG6 1382 aaKnown RBP9.86□□□□□ -0.83
CPNE4-212ENST00000514999 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
CPNE4-212ENST00000514999 PHF8Q9UPP1 1060 aa9.85□□□□□ -0.83
CPNE4-212ENST00000514999 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
CPNE4-212ENST00000514999 VGFO15240 615 aaPredicted RBP9.84□□□□□ -0.83
CPNE4-212ENST00000514999 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
CPNE4-212ENST00000514999 SOGA1O94964 1423 aa9.83□□□□□ -0.84
CPNE4-212ENST00000514999 TNIKQ9UKE5 1360 aa9.83□□□□□ -0.84
CPNE4-212ENST00000514999 POLA1P09884 1462 aaPredicted RBP9.83□□□□□ -0.84
CPNE4-212ENST00000514999 SNAPC4Q5SXM2 1469 aa9.83□□□□□ -0.84
CPNE4-212ENST00000514999 SYNJ1O43426 1573 aa9.83□□□□□ -0.84
CPNE4-212ENST00000514999 ZNF687Q8N1G0 1237 aa9.81□□□□□ -0.84
CPNE4-212ENST00000514999 SUPT16HQ9Y5B9 1047 aaKnown RBP9.81□□□□□ -0.84
CPNE4-212ENST00000514999 CLASP1Q7Z460 1538 aa9.81□□□□□ -0.84
CPNE4-212ENST00000514999 CEP162Q5TB80 1403 aa9.81□□□□□ -0.84
CPNE4-212ENST00000514999 MYT1LQ9UL68 1186 aa9.79□□□□□ -0.84
CPNE4-212ENST00000514999 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-212ENST00000514999 GAPVD1Q14C86 1478 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms