RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
CPNE4-212ENST00000514999 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
CPNE4-212ENST00000514999 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
CPNE4-212ENST00000514999 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
CPNE4-212ENST00000514999 FOXD1Q16676 465 aa18.08■□□□□ 0.48
CPNE4-212ENST00000514999 MSH5O43196 834 aa16.97■□□□□ 0.31
CPNE4-212ENST00000514999 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
CPNE4-212ENST00000514999 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
CPNE4-212ENST00000514999 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
CPNE4-212ENST00000514999 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
CPNE4-212ENST00000514999 ADRA2BP18089 450 aa16.68■□□□□ 0.26
CPNE4-212ENST00000514999 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
CPNE4-212ENST00000514999 DMRT2Q9Y5R5 561 aa15.33■□□□□ 0.04
CPNE4-212ENST00000514999 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
CPNE4-212ENST00000514999 PPP4R3CPQ6ZMV5 832 aa14.84□□□□□ -0.03
CPNE4-212ENST00000514999 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
CPNE4-212ENST00000514999 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
CPNE4-212ENST00000514999 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
CPNE4-212ENST00000514999 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
CPNE4-212ENST00000514999 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
CPNE4-212ENST00000514999 RNF39Q9H2S5 420 aa14.48□□□□□ -0.09
CPNE4-212ENST00000514999 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
CPNE4-212ENST00000514999 C1QBPQ07021 282 aaKnown RBP14.25□□□□□ -0.13
CPNE4-212ENST00000514999 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
CPNE4-212ENST00000514999 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
CPNE4-212ENST00000514999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPNE4-212ENST00000514999 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
CPNE4-212ENST00000514999 KCNA4P22459 653 aa13.57□□□□□ -0.24
CPNE4-212ENST00000514999 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
CPNE4-212ENST00000514999 DSG3P32926 999 aa13.5□□□□□ -0.25
CPNE4-212ENST00000514999 CAPN15O75808 1086 aa13.49□□□□□ -0.25
CPNE4-212ENST00000514999 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
CPNE4-212ENST00000514999 NISCHQ9Y2I1 1504 aa13.33□□□□□ -0.28
CPNE4-212ENST00000514999 APLP2Q06481 763 aa13.24□□□□□ -0.29
CPNE4-212ENST00000514999 TRHP20396 242 aaPredicted RBP13.23□□□□□ -0.29
CPNE4-212ENST00000514999 ZNF219Q9P2Y4 722 aaPredicted RBP13.21□□□□□ -0.29
CPNE4-212ENST00000514999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
CPNE4-212ENST00000514999 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
CPNE4-212ENST00000514999 POTEHQ6S545 545 aa13.2□□□□□ -0.3
CPNE4-212ENST00000514999 ABCB7O75027 752 aa13.16□□□□□ -0.3
CPNE4-212ENST00000514999 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CPNE4-212ENST00000514999 MYCNP04198 464 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-212ENST00000514999 POLA2Q14181 598 aa12.85□□□□□ -0.35
CPNE4-212ENST00000514999 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
CPNE4-212ENST00000514999 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
CPNE4-212ENST00000514999 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
CPNE4-212ENST00000514999 ATF5Q9Y2D1 282 aaPredicted RBP12.69□□□□□ -0.38
CPNE4-212ENST00000514999 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
CPNE4-212ENST00000514999 ZBTB12Q9Y330 459 aaPredicted RBP12.56□□□□□ -0.4
CPNE4-212ENST00000514999 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
CPNE4-212ENST00000514999 ZBTB22O15209 634 aa12.49□□□□□ -0.41
CPNE4-212ENST00000514999 ABCC9O60706 1549 aa12.46□□□□□ -0.42
CPNE4-212ENST00000514999 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
CPNE4-212ENST00000514999 REM2Q8IYK8 340 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-212ENST00000514999 ATXN8OSP0DMR3 200 aa12.36□□□□□ -0.43
CPNE4-212ENST00000514999 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
CPNE4-212ENST00000514999 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
CPNE4-212ENST00000514999 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
CPNE4-212ENST00000514999 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
CPNE4-212ENST00000514999 SPDYE2BA6NHP3 402 aa12.18□□□□□ -0.46
CPNE4-212ENST00000514999 SPDYE6P0CI01 402 aa12.18□□□□□ -0.46
CPNE4-212ENST00000514999 SPDYE2Q495Y8 402 aa12.18□□□□□ -0.46
CPNE4-212ENST00000514999 FBLN2P98095 1184 aa12.16□□□□□ -0.46
CPNE4-212ENST00000514999 HAX1O00165 279 aa12.13□□□□□ -0.47
CPNE4-212ENST00000514999 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
CPNE4-212ENST00000514999 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
CPNE4-212ENST00000514999 EVX2Q03828 476 aa12.01□□□□□ -0.49
CPNE4-212ENST00000514999 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
CPNE4-212ENST00000514999 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
CPNE4-212ENST00000514999 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
CPNE4-212ENST00000514999 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
CPNE4-212ENST00000514999 PRKAR2AP13861 404 aaKnown RBP11.96□□□□□ -0.49
CPNE4-212ENST00000514999 C19orf67A6NJJ6 358 aa11.86□□□□□ -0.51
CPNE4-212ENST00000514999 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
CPNE4-212ENST00000514999 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
CPNE4-212ENST00000514999 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
CPNE4-212ENST00000514999 CSRNP3Q8WYN3 585 aa11.74□□□□□ -0.53
CPNE4-212ENST00000514999 GABBR2O75899 941 aa11.71□□□□□ -0.53
CPNE4-212ENST00000514999 RB1CC1Q8TDY2 1594 aa11.68□□□□□ -0.54
CPNE4-212ENST00000514999 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
CPNE4-212ENST00000514999 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-212ENST00000514999 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
CPNE4-212ENST00000514999 LHX8Q68G74 356 aa11.52□□□□□ -0.57
CPNE4-212ENST00000514999 NACADO15069 1562 aa11.5□□□□□ -0.57
CPNE4-212ENST00000514999 POTEIP0CG38 1075 aa11.49□□□□□ -0.57
CPNE4-212ENST00000514999 CLCN6P51797 869 aa11.47□□□□□ -0.57
CPNE4-212ENST00000514999 CREBZFQ9NS37 354 aa11.45□□□□□ -0.58
CPNE4-212ENST00000514999 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
CPNE4-212ENST00000514999 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
CPNE4-212ENST00000514999 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
CPNE4-212ENST00000514999 SPDYE4A6NLX3 237 aa11.41□□□□□ -0.58
CPNE4-212ENST00000514999 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
CPNE4-212ENST00000514999 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
CPNE4-212ENST00000514999 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
CPNE4-212ENST00000514999 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
CPNE4-212ENST00000514999 HRCP23327 699 aa11.31□□□□□ -0.6
CPNE4-212ENST00000514999 BICRAQ9NZM4 1560 aa11.3□□□□□ -0.6
CPNE4-212ENST00000514999 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
CPNE4-212ENST00000514999 MNX1P50219 401 aaPredicted RBP11.25□□□□□ -0.61
CPNE4-212ENST00000514999 CECR2Q9BXF3 1484 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms