RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 OS9Q13438 667 aaPredicted RBP9.76□□□□□ -0.85
CCDC30-214ENST00000514642 CASC1Q6TDU7 716 aa9.76□□□□□ -0.85
CCDC30-214ENST00000514642 G3V3G9 751 aa9.76□□□□□ -0.85
CCDC30-214ENST00000514642 EIF5BO60841 1220 aaKnown RBP9.76□□□□□ -0.85
CCDC30-214ENST00000514642 DCAF8Q5TAQ9 597 aa9.76□□□□□ -0.85
CCDC30-214ENST00000514642 IFT140Q96RY7 1462 aa9.76□□□□□ -0.85
CCDC30-214ENST00000514642 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.75□□□□□ -0.85
CCDC30-214ENST00000514642 MORC1Q86VD1 984 aa9.75□□□□□ -0.85
CCDC30-214ENST00000514642 NCAPD3P42695 1498 aa9.75□□□□□ -0.85
CCDC30-214ENST00000514642 UACAQ9BZF9 1416 aa9.74□□□□□ -0.85
CCDC30-214ENST00000514642 ANP32AP39687 249 aaKnown RBP9.74□□□□□ -0.85
CCDC30-214ENST00000514642 NUP155O75694 1391 aa9.74□□□□□ -0.85
CCDC30-214ENST00000514642 PKD2Q13563 968 aa9.74□□□□□ -0.85
CCDC30-214ENST00000514642 FTSJ3Q8IY81 847 aaKnown RBP9.74□□□□□ -0.85
CCDC30-214ENST00000514642 ATF3P18847 181 aa9.73□□□□□ -0.85
CCDC30-214ENST00000514642 CHMP4AQ9BY43 222 aa9.73□□□□□ -0.85
CCDC30-214ENST00000514642 PRDM2Q13029 1718 aa9.73□□□□□ -0.85
CCDC30-214ENST00000514642 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
CCDC30-214ENST00000514642 FGD5Q6ZNL6 1462 aa9.72□□□□□ -0.85
CCDC30-214ENST00000514642 ANP32BQ92688 251 aaKnown RBP9.72□□□□□ -0.85
CCDC30-214ENST00000514642 FHOD3Q2V2M9 1422 aa9.72□□□□□ -0.85
CCDC30-214ENST00000514642 MSH5O43196 834 aa9.72□□□□□ -0.85
CCDC30-214ENST00000514642 TERF2IPQ9NYB0 399 aa9.71□□□□□ -0.85
CCDC30-214ENST00000514642 ZNF330Q9Y3S2 320 aaPredicted RBP9.71□□□□□ -0.85
CCDC30-214ENST00000514642 POGZQ7Z3K3 1410 aa9.71□□□□□ -0.86
CCDC30-214ENST00000514642 MS4A1P11836 297 aa9.7□□□□□ -0.86
CCDC30-214ENST00000514642 CC2D1BQ5T0F9 858 aaKnown RBP9.7□□□□□ -0.86
CCDC30-214ENST00000514642 SF3B2Q13435 895 aaKnown RBP9.7□□□□□ -0.86
CCDC30-214ENST00000514642 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
CCDC30-214ENST00000514642 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
CCDC30-214ENST00000514642 AQRO60306 1485 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC30-214ENST00000514642 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
CCDC30-214ENST00000514642 CALD1Q05682 793 aaKnown RBP9.69□□□□□ -0.86
CCDC30-214ENST00000514642 AMPHP49418 695 aa9.68□□□□□ -0.86
CCDC30-214ENST00000514642 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
CCDC30-214ENST00000514642 RAD54L2Q9Y4B4 1467 aa9.67□□□□□ -0.86
CCDC30-214ENST00000514642 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
CCDC30-214ENST00000514642 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
CCDC30-214ENST00000514642 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
CCDC30-214ENST00000514642 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
CCDC30-214ENST00000514642 VPS8Q8N3P4 1428 aa9.65□□□□□ -0.86
CCDC30-214ENST00000514642 PRG4Q92954 1404 aaPredicted RBP9.65□□□□□ -0.86
CCDC30-214ENST00000514642 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.87
CCDC30-214ENST00000514642 PSME1Q06323 249 aa9.65□□□□□ -0.87
CCDC30-214ENST00000514642 CCDC136Q96JN2 1154 aa9.65□□□□□ -0.87
CCDC30-214ENST00000514642 SYNJ2O15056 1496 aa9.63□□□□□ -0.87
CCDC30-214ENST00000514642 NCLP19338 710 aaKnown RBP9.63□□□□□ -0.87
CCDC30-214ENST00000514642 TAF7LQ5H9L4 462 aa9.63□□□□□ -0.87
CCDC30-214ENST00000514642 ARHGAP5Q13017 1502 aa9.63□□□□□ -0.87
CCDC30-214ENST00000514642 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
CCDC30-214ENST00000514642 C1orf141Q5JVX7 400 aa9.62□□□□□ -0.87
CCDC30-214ENST00000514642 HMGXB3Q12766 1538 aa9.62□□□□□ -0.87
CCDC30-214ENST00000514642 NUTM2FA1L443 756 aa9.62□□□□□ -0.87
CCDC30-214ENST00000514642 MPHOSPH9Q99550 1183 aa9.62□□□□□ -0.87
CCDC30-214ENST00000514642 LTV1Q96GA3 475 aaPredicted RBP9.61□□□□□ -0.87
CCDC30-214ENST00000514642 HDAC5Q9UQL6 1122 aa9.61□□□□□ -0.87
CCDC30-214ENST00000514642 FGD1P98174 961 aa9.6□□□□□ -0.87
CCDC30-214ENST00000514642 ZRSR1Q15695 479 aaKnown RBP9.6□□□□□ -0.87
CCDC30-214ENST00000514642 WASHC2AQ641Q2 1341 aa9.6□□□□□ -0.87
CCDC30-214ENST00000514642 SNAPC4Q5SXM2 1469 aa9.6□□□□□ -0.87
CCDC30-214ENST00000514642 KCNJ4P48050 445 aa9.59□□□□□ -0.87
CCDC30-214ENST00000514642 CCDC144AA2RUR9 1427 aa9.59□□□□□ -0.87
CCDC30-214ENST00000514642 NESP48681 1621 aa9.59□□□□□ -0.87
CCDC30-214ENST00000514642 KTN1Q86UP2 1357 aaKnown RBP9.59□□□□□ -0.87
CCDC30-214ENST00000514642 COG3Q96JB2 828 aa9.59□□□□□ -0.87
CCDC30-214ENST00000514642 LMOD3Q0VAK6 560 aa9.58□□□□□ -0.88
CCDC30-214ENST00000514642 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
CCDC30-214ENST00000514642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCDC30-214ENST00000514642 THEMISQ8N1K5 641 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-214ENST00000514642 SIN3AQ96ST3 1273 aa9.58□□□□□ -0.88
CCDC30-214ENST00000514642 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
CCDC30-214ENST00000514642 STK31Q9BXU1 1019 aa9.58□□□□□ -0.88
CCDC30-214ENST00000514642 EVC2Q86UK5 1308 aa9.58□□□□□ -0.88
CCDC30-214ENST00000514642 FKBP8Q14318 412 aa9.57□□□□□ -0.88
CCDC30-214ENST00000514642 TIMELESSQ9UNS1 1208 aa9.57□□□□□ -0.88
CCDC30-214ENST00000514642 GORABQ5T7V8 394 aa9.57□□□□□ -0.88
CCDC30-214ENST00000514642 CHMP3Q9Y3E7 222 aa9.57□□□□□ -0.88
CCDC30-214ENST00000514642 FRAT1Q92837 279 aaPredicted RBP9.57□□□□□ -0.88
CCDC30-214ENST00000514642 PIP4K2BP78356 416 aa9.56□□□□□ -0.88
CCDC30-214ENST00000514642 NAP1L2Q9ULW6 460 aaPredicted RBP9.56□□□□□ -0.88
CCDC30-214ENST00000514642 TRAK1Q9UPV9 953 aa9.56□□□□□ -0.88
CCDC30-214ENST00000514642 U2AF1L5P0DN76 240 aaPredicted RBP9.55□□□□□ -0.88
CCDC30-214ENST00000514642 U2AF1Q01081 240 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC30-214ENST00000514642 TTC5Q8N0Z6 440 aa9.55□□□□□ -0.88
CCDC30-214ENST00000514642 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
CCDC30-214ENST00000514642 CLSTN1O94985 981 aa9.55□□□□□ -0.88
CCDC30-214ENST00000514642 CUX1P39880 1505 aa9.55□□□□□ -0.88
CCDC30-214ENST00000514642 HMGB2P26583 209 aaKnown RBP9.55□□□□□ -0.88
CCDC30-214ENST00000514642 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CCDC30-214ENST00000514642 IPO8O15397 1037 aaKnown RBP9.54□□□□□ -0.88
CCDC30-214ENST00000514642 ANKLE2Q86XL3 938 aa9.54□□□□□ -0.88
CCDC30-214ENST00000514642 GPRASP1Q5JY77 1395 aa9.54□□□□□ -0.88
CCDC30-214ENST00000514642 PLEKHH2Q8IVE3 1493 aa9.54□□□□□ -0.88
CCDC30-214ENST00000514642 FRAT2O75474 233 aaPredicted RBP9.54□□□□□ -0.88
CCDC30-214ENST00000514642 BECN1Q14457 450 aa9.54□□□□□ -0.88
CCDC30-214ENST00000514642 SYNJ1O43426 1573 aa9.54□□□□□ -0.88
CCDC30-214ENST00000514642 CFTRP13569 1480 aa9.53□□□□□ -0.88
CCDC30-214ENST00000514642 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
CCDC30-214ENST00000514642 DNMBPQ6XZF7 1577 aa9.53□□□□□ -0.88
CCDC30-214ENST00000514642 TXNDC2Q86VQ3 553 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms