RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 NUP155O75694 1391 aa18.4■□□□□ 0.54
AP001999.1-201ENST00000513405 ANP32AP39687 249 aaKnown RBP18.37■□□□□ 0.53
AP001999.1-201ENST00000513405 FYCO1Q9BQS8 1478 aa18.35■□□□□ 0.53
AP001999.1-201ENST00000513405 JPH4Q96JJ6 628 aa18.34■□□□□ 0.53
AP001999.1-201ENST00000513405 CDK13Q14004 1512 aaKnown RBP18.34■□□□□ 0.53
AP001999.1-201ENST00000513405 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.53
AP001999.1-201ENST00000513405 HFM1A2PYH4 1435 aa18.33■□□□□ 0.52
AP001999.1-201ENST00000513405 CCDC7Q96M83 1385 aa18.32■□□□□ 0.52
AP001999.1-201ENST00000513405 PLIN1O60240 522 aa18.3■□□□□ 0.52
AP001999.1-201ENST00000513405 ERCC6Q03468 1493 aa18.29■□□□□ 0.52
AP001999.1-201ENST00000513405 MSH5O43196 834 aa18.28■□□□□ 0.52
AP001999.1-201ENST00000513405 LAS1LQ9Y4W2 734 aaKnown RBP18.28■□□□□ 0.52
AP001999.1-201ENST00000513405 TNNT2P45379 298 aaPredicted RBP18.28■□□□□ 0.52
AP001999.1-201ENST00000513405 ZBTB47Q9UFB7 747 aaPredicted RBP18.27■□□□□ 0.52
AP001999.1-201ENST00000513405 ABCA10Q8WWZ4 1543 aa18.26■□□□□ 0.51
AP001999.1-201ENST00000513405 USP47Q96K76 1375 aa18.26■□□□□ 0.51
AP001999.1-201ENST00000513405 PRG4Q92954 1404 aaPredicted RBP18.26■□□□□ 0.51
AP001999.1-201ENST00000513405 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
AP001999.1-201ENST00000513405 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
AP001999.1-201ENST00000513405 ARXQ96QS3 562 aa18.22■□□□□ 0.51
AP001999.1-201ENST00000513405 AKNAQ7Z591 1439 aa18.22■□□□□ 0.51
AP001999.1-201ENST00000513405 NBPF1Q3BBV0 1214 aa18.21■□□□□ 0.51
AP001999.1-201ENST00000513405 SKAP1Q86WV1 359 aa18.21■□□□□ 0.51
AP001999.1-201ENST00000513405 NUDCQ9Y266 331 aa18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 EIF5BO60841 1220 aaKnown RBP18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 ROCK2O75116 1388 aaKnown RBP18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
AP001999.1-201ENST00000513405 ZBED9Q6R2W3 1325 aa18.18■□□□□ 0.5
AP001999.1-201ENST00000513405 CDCA7LQ96GN5 454 aa18.18■□□□□ 0.5
AP001999.1-201ENST00000513405 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
AP001999.1-201ENST00000513405 PRDM2Q13029 1718 aa18.17■□□□□ 0.5
AP001999.1-201ENST00000513405 ANKRD30AQ9BXX3 1397 aa18.17■□□□□ 0.5
AP001999.1-201ENST00000513405 DEKP35659 375 aaKnown RBP18.17■□□□□ 0.5
AP001999.1-201ENST00000513405 RGS3P49796 1198 aa18.17■□□□□ 0.5
AP001999.1-201ENST00000513405 RCAN3Q9UKA8 241 aa18.14■□□□□ 0.5
AP001999.1-201ENST00000513405 EFCAB5A4FU69 1503 aa18.14■□□□□ 0.49
AP001999.1-201ENST00000513405 EPRSP07814 1512 aaKnown RBP18.14■□□□□ 0.49
AP001999.1-201ENST00000513405 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
AP001999.1-201ENST00000513405 MAP3K1Q13233 1512 aa18.13■□□□□ 0.49
AP001999.1-201ENST00000513405 PAK3O75914 559 aaPredicted RBP18.13■□□□□ 0.49
AP001999.1-201ENST00000513405 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
AP001999.1-201ENST00000513405 PANK3Q9H999 370 aa18.13■□□□□ 0.49
AP001999.1-201ENST00000513405 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
AP001999.1-201ENST00000513405 PTPN23Q9H3S7 1636 aa18.12■□□□□ 0.49
AP001999.1-201ENST00000513405 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
AP001999.1-201ENST00000513405 NUTM2DQ5VT03 806 aaPredicted RBP18.09■□□□□ 0.49
AP001999.1-201ENST00000513405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.09■□□□□ 0.49
AP001999.1-201ENST00000513405 SAFB2Q14151 953 aaKnown RBP eCLIP18.09■□□□□ 0.49
AP001999.1-201ENST00000513405 SLC4A3P48751 1232 aa18.09■□□□□ 0.49
AP001999.1-201ENST00000513405 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.48
AP001999.1-201ENST00000513405 DAPK1P53355 1430 aa18.08■□□□□ 0.48
AP001999.1-201ENST00000513405 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
AP001999.1-201ENST00000513405 ABCC5O15440 1437 aa18.07■□□□□ 0.48
AP001999.1-201ENST00000513405 ANKRD50Q9ULJ7 1429 aa18.07■□□□□ 0.48
AP001999.1-201ENST00000513405 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
AP001999.1-201ENST00000513405 THOC2Q8NI27 1593 aaKnown RBP18.05■□□□□ 0.48
AP001999.1-201ENST00000513405 EHBP1L1Q8N3D4 1523 aa18.05■□□□□ 0.48
AP001999.1-201ENST00000513405 CARMIL2Q6F5E8 1435 aa18.04■□□□□ 0.48
AP001999.1-201ENST00000513405 TMF1P82094 1093 aa18.04■□□□□ 0.48
AP001999.1-201ENST00000513405 FRAT1Q92837 279 aaPredicted RBP18.04■□□□□ 0.48
AP001999.1-201ENST00000513405 GRIN2BQ13224 1484 aa18.03■□□□□ 0.48
AP001999.1-201ENST00000513405 KTN1Q86UP2 1357 aaKnown RBP18.03■□□□□ 0.48
AP001999.1-201ENST00000513405 KIF15Q9NS87 1388 aa18.03■□□□□ 0.48
AP001999.1-201ENST00000513405 SUPT6HQ7KZ85 1726 aaKnown RBP18.02■□□□□ 0.48
AP001999.1-201ENST00000513405 NLRP13Q86W25 1043 aa18.02■□□□□ 0.48
AP001999.1-201ENST00000513405 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
AP001999.1-201ENST00000513405 MAGI3Q5TCQ9 1506 aa18.01■□□□□ 0.47
AP001999.1-201ENST00000513405 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
AP001999.1-201ENST00000513405 NEFMP07197 916 aa18■□□□□ 0.47
AP001999.1-201ENST00000513405 RRP1P56182 461 aaKnown RBP17.99■□□□□ 0.47
AP001999.1-201ENST00000513405 CRBNQ96SW2 442 aa17.99■□□□□ 0.47
AP001999.1-201ENST00000513405 RALBP1Q15311 655 aa17.99■□□□□ 0.47
AP001999.1-201ENST00000513405 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
AP001999.1-201ENST00000513405 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
AP001999.1-201ENST00000513405 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
AP001999.1-201ENST00000513405 NCOA1Q15788 1441 aa17.97■□□□□ 0.47
AP001999.1-201ENST00000513405 KIF3BO15066 747 aa17.97■□□□□ 0.47
AP001999.1-201ENST00000513405 AFAP1Q8N556 730 aa17.97■□□□□ 0.47
AP001999.1-201ENST00000513405 GGT6Q6P531 493 aa17.96■□□□□ 0.47
AP001999.1-201ENST00000513405 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
AP001999.1-201ENST00000513405 PTPRGP23470 1445 aa17.96■□□□□ 0.47
AP001999.1-201ENST00000513405 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
AP001999.1-201ENST00000513405 KDM6BO15054 1643 aa17.96■□□□□ 0.46
AP001999.1-201ENST00000513405 CCDC144AA2RUR9 1427 aa17.95■□□□□ 0.46
AP001999.1-201ENST00000513405 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
AP001999.1-201ENST00000513405 IPO9Q96P70 1041 aaKnown RBP17.94■□□□□ 0.46
AP001999.1-201ENST00000513405 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
AP001999.1-201ENST00000513405 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
AP001999.1-201ENST00000513405 BCL2L13Q9BXK5 485 aa17.93■□□□□ 0.46
AP001999.1-201ENST00000513405 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
AP001999.1-201ENST00000513405 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
AP001999.1-201ENST00000513405 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
AP001999.1-201ENST00000513405 PDE4AP27815 886 aa17.92■□□□□ 0.46
AP001999.1-201ENST00000513405 CUL7Q14999 1698 aa17.92■□□□□ 0.46
AP001999.1-201ENST00000513405 TROQ12816 1431 aaPredicted RBP17.91■□□□□ 0.46
AP001999.1-201ENST00000513405 ARHGEF11O15085 1522 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms