RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 CFAP74Q9C0B2 1584 aa17.01■□□□□ 0.31
PTPN20-228ENST00000513266 HECW1Q76N89 1606 aa17■□□□□ 0.31
PTPN20-228ENST00000513266 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
PTPN20-228ENST00000513266 RAPGEF6Q8TEU7 1601 aa16.95■□□□□ 0.3
PTPN20-228ENST00000513266 C3P01024 1663 aa16.94■□□□□ 0.3
PTPN20-228ENST00000513266 UBAP1LF5GYI3 381 aa16.94■□□□□ 0.3
PTPN20-228ENST00000513266 NCOA1Q15788 1441 aa16.91■□□□□ 0.3
PTPN20-228ENST00000513266 ATP10AO60312 1499 aa16.91■□□□□ 0.3
PTPN20-228ENST00000513266 C9orf84Q5VXU9 1444 aa16.9■□□□□ 0.3
PTPN20-228ENST00000513266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPN20-228ENST00000513266 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
PTPN20-228ENST00000513266 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
PTPN20-228ENST00000513266 HNRNPUL2Q1KMD3 747 aaKnown RBP16.87■□□□□ 0.29
PTPN20-228ENST00000513266 NUP153P49790 1475 aaKnown RBP16.86■□□□□ 0.29
PTPN20-228ENST00000513266 ZNF335Q9H4Z2 1342 aaPredicted RBP16.86■□□□□ 0.29
PTPN20-228ENST00000513266 HSPA1LP34931 641 aa16.85■□□□□ 0.29
PTPN20-228ENST00000513266 FAM9AQ8IZU1 332 aaPredicted RBP16.84■□□□□ 0.29
PTPN20-228ENST00000513266 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
PTPN20-228ENST00000513266 SAMD9Q5K651 1589 aa16.83■□□□□ 0.28
PTPN20-228ENST00000513266 SCAPERQ9BY12 1400 aa16.83■□□□□ 0.28
PTPN20-228ENST00000513266 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
PTPN20-228ENST00000513266 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
PTPN20-228ENST00000513266 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
PTPN20-228ENST00000513266 DIP2CQ9Y2E4 1556 aa16.76■□□□□ 0.27
PTPN20-228ENST00000513266 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
PTPN20-228ENST00000513266 PRXQ9BXM0 1461 aa16.75■□□□□ 0.27
PTPN20-228ENST00000513266 REREQ9P2R6 1566 aa16.75■□□□□ 0.27
PTPN20-228ENST00000513266 SUPT6HQ7KZ85 1726 aaKnown RBP16.75■□□□□ 0.27
PTPN20-228ENST00000513266 SCAF1Q9H7N4 1312 aaKnown RBP16.74■□□□□ 0.27
PTPN20-228ENST00000513266 PLCH2O75038 1416 aa16.73■□□□□ 0.27
PTPN20-228ENST00000513266 PIP4K2BP78356 416 aa16.73■□□□□ 0.27
PTPN20-228ENST00000513266 KDM5CP41229 1560 aa16.72■□□□□ 0.27
PTPN20-228ENST00000513266 ABCA6Q8N139 1617 aa16.71■□□□□ 0.27
PTPN20-228ENST00000513266 MYO5CQ9NQX4 1742 aa16.71■□□□□ 0.27
PTPN20-228ENST00000513266 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
PTPN20-228ENST00000513266 AGLP35573 1532 aa16.7■□□□□ 0.26
PTPN20-228ENST00000513266 ZNF518AQ6AHZ1 1483 aa16.69■□□□□ 0.26
PTPN20-228ENST00000513266 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
PTPN20-228ENST00000513266 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
PTPN20-228ENST00000513266 TCOF1Q13428 1488 aaKnown RBP16.67■□□□□ 0.26
PTPN20-228ENST00000513266 NPATQ14207 1427 aa16.67■□□□□ 0.26
PTPN20-228ENST00000513266 ALKQ9UM73 1620 aa16.67■□□□□ 0.26
PTPN20-228ENST00000513266 MYO3AQ8NEV4 1616 aa16.66■□□□□ 0.26
PTPN20-228ENST00000513266 TOM1O60784 492 aa16.65■□□□□ 0.26
PTPN20-228ENST00000513266 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
PTPN20-228ENST00000513266 CNTLNQ9NXG0 1405 aa16.64■□□□□ 0.25
PTPN20-228ENST00000513266 PKD2Q13563 968 aa16.64■□□□□ 0.25
PTPN20-228ENST00000513266 AFAP1Q8N556 730 aa16.64■□□□□ 0.25
PTPN20-228ENST00000513266 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
PTPN20-228ENST00000513266 CDK13Q14004 1512 aaKnown RBP16.62■□□□□ 0.25
PTPN20-228ENST00000513266 EFCAB2Q5VUJ9 269 aa16.62■□□□□ 0.25
PTPN20-228ENST00000513266 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
PTPN20-228ENST00000513266 CPS1P31327 1500 aa16.61■□□□□ 0.25
PTPN20-228ENST00000513266 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
PTPN20-228ENST00000513266 MLH3Q9UHC1 1453 aa16.6■□□□□ 0.25
PTPN20-228ENST00000513266 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
PTPN20-228ENST00000513266 POLR1AO95602 1720 aaPredicted RBP16.58■□□□□ 0.24
PTPN20-228ENST00000513266 KIDINS220Q9ULH0 1771 aa16.58■□□□□ 0.24
PTPN20-228ENST00000513266 KIF14Q15058 1648 aa16.57■□□□□ 0.24
PTPN20-228ENST00000513266 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
PTPN20-228ENST00000513266 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
PTPN20-228ENST00000513266 SHANK2Q9UPX8 1470 aa16.55■□□□□ 0.24
PTPN20-228ENST00000513266 SETD1AO15047 1707 aaKnown RBP16.55■□□□□ 0.24
PTPN20-228ENST00000513266 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
PTPN20-228ENST00000513266 ARHGAP5Q13017 1502 aa16.55■□□□□ 0.24
PTPN20-228ENST00000513266 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
PTPN20-228ENST00000513266 CDC42BPBQ9Y5S2 1711 aa16.54■□□□□ 0.24
PTPN20-228ENST00000513266 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
PTPN20-228ENST00000513266 ITSN2Q9NZM3 1697 aa16.52■□□□□ 0.23
PTPN20-228ENST00000513266 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
PTPN20-228ENST00000513266 VWDEQ8N2E2 1590 aa16.51■□□□□ 0.23
PTPN20-228ENST00000513266 RANGAP1P46060 587 aaPredicted RBP16.5■□□□□ 0.23
PTPN20-228ENST00000513266 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
PTPN20-228ENST00000513266 ABCC1P33527 1531 aa16.48■□□□□ 0.23
PTPN20-228ENST00000513266 STRCP1A6NGW2 1772 aa16.47■□□□□ 0.23
PTPN20-228ENST00000513266 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
PTPN20-228ENST00000513266 RNF17Q9BXT8 1623 aaKnown RBP16.44■□□□□ 0.22
PTPN20-228ENST00000513266 PREX2Q70Z35 1606 aa16.43■□□□□ 0.22
PTPN20-228ENST00000513266 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
PTPN20-228ENST00000513266 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
PTPN20-228ENST00000513266 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
PTPN20-228ENST00000513266 LRRIQ1Q96JM4 1722 aa16.39■□□□□ 0.21
PTPN20-228ENST00000513266 PLXNC1O60486 1568 aa16.38■□□□□ 0.21
PTPN20-228ENST00000513266 SYNMO15061 1565 aa16.37■□□□□ 0.21
PTPN20-228ENST00000513266 CDC42BPAQ5VT25 1732 aa16.36■□□□□ 0.21
PTPN20-228ENST00000513266 DEPDC5O75140 1603 aa16.35■□□□□ 0.21
PTPN20-228ENST00000513266 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
PTPN20-228ENST00000513266 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
PTPN20-228ENST00000513266 MED14O60244 1454 aa16.34■□□□□ 0.21
PTPN20-228ENST00000513266 CDK11AQ9UQ88 783 aaPredicted RBP16.33■□□□□ 0.2
PTPN20-228ENST00000513266 NPHP4O75161 1426 aaPredicted RBP16.32■□□□□ 0.2
PTPN20-228ENST00000513266 CLIP1P30622 1438 aa16.32■□□□□ 0.2
PTPN20-228ENST00000513266 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
PTPN20-228ENST00000513266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
PTPN20-228ENST00000513266 ATP1B4Q9UN42 357 aaPredicted RBP16.31■□□□□ 0.2
PTPN20-228ENST00000513266 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
PTPN20-228ENST00000513266 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
PTPN20-228ENST00000513266 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
PTPN20-228ENST00000513266 UPF1Q92900 1129 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN20-228ENST00000513266 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms