RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 CDK13Q14004 1512 aaKnown RBP26.73■■□□□ 1.87
DDR1-269ENST00000512725 MAGI2Q86UL8 1455 aa26.72■■□□□ 1.87
DDR1-269ENST00000512725 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
DDR1-269ENST00000512725 EEA1Q15075 1411 aa26.7■■□□□ 1.86
DDR1-269ENST00000512725 MYT1LQ9UL68 1186 aa26.68■■□□□ 1.86
DDR1-269ENST00000512725 CEBPAP49715 358 aaPredicted RBP26.67■■□□□ 1.86
DDR1-269ENST00000512725 PLCH2O75038 1416 aa26.65■■□□□ 1.86
DDR1-269ENST00000512725 ATP10AO60312 1499 aa26.64■■□□□ 1.86
DDR1-269ENST00000512725 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
DDR1-269ENST00000512725 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
DDR1-269ENST00000512725 PREX1Q8TCU6 1659 aa26.6■■□□□ 1.85
DDR1-269ENST00000512725 ARHGEF12Q9NZN5 1544 aa26.59■■□□□ 1.85
DDR1-269ENST00000512725 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
DDR1-269ENST00000512725 CDK11AQ9UQ88 783 aaPredicted RBP26.57■■□□□ 1.84
DDR1-269ENST00000512725 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
DDR1-269ENST00000512725 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
DDR1-269ENST00000512725 DMRT2Q9Y5R5 561 aa26.55■■□□□ 1.84
DDR1-269ENST00000512725 AFAP1Q8N556 730 aa26.53■■□□□ 1.84
DDR1-269ENST00000512725 UHRF1BP1Q6BDS2 1440 aa26.52■■□□□ 1.84
DDR1-269ENST00000512725 ARHGAP5Q13017 1502 aa26.51■■□□□ 1.83
DDR1-269ENST00000512725 ZNF518AQ6AHZ1 1483 aa26.5■■□□□ 1.83
DDR1-269ENST00000512725 KIF14Q15058 1648 aa26.5■■□□□ 1.83
DDR1-269ENST00000512725 FMN1Q68DA7 1419 aa26.49■■□□□ 1.83
DDR1-269ENST00000512725 ESF1Q9H501 851 aaKnown RBP26.49■■□□□ 1.83
DDR1-269ENST00000512725 STRCQ7RTU9 1775 aa26.47■■□□□ 1.83
DDR1-269ENST00000512725 ILDR2Q71H61 639 aa26.46■■□□□ 1.83
DDR1-269ENST00000512725 CLIP1P30622 1438 aa26.44■■□□□ 1.82
DDR1-269ENST00000512725 TROQ12816 1431 aaPredicted RBP26.42■■□□□ 1.82
DDR1-269ENST00000512725 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
DDR1-269ENST00000512725 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
DDR1-269ENST00000512725 KDM5CP41229 1560 aa26.4■■□□□ 1.82
DDR1-269ENST00000512725 DIP2CQ9Y2E4 1556 aa26.4■■□□□ 1.82
DDR1-269ENST00000512725 C3P01024 1663 aa26.37■■□□□ 1.81
DDR1-269ENST00000512725 ABCA6Q8N139 1617 aa26.36■■□□□ 1.81
DDR1-269ENST00000512725 SOCS7O14512 581 aa26.35■■□□□ 1.81
DDR1-269ENST00000512725 CDC42BPBQ9Y5S2 1711 aa26.33■■□□□ 1.81
DDR1-269ENST00000512725 PTPRTO14522 1441 aa26.32■■□□□ 1.8
DDR1-269ENST00000512725 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
DDR1-269ENST00000512725 MLH3Q9UHC1 1453 aa26.3■■□□□ 1.8
DDR1-269ENST00000512725 REREQ9P2R6 1566 aa26.3■■□□□ 1.8
DDR1-269ENST00000512725 LRRIQ1Q96JM4 1722 aa26.3■■□□□ 1.8
DDR1-269ENST00000512725 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
DDR1-269ENST00000512725 ZNF777Q9ULD5 760 aaPredicted RBP26.26■■□□□ 1.79
DDR1-269ENST00000512725 PREX2Q70Z35 1606 aa26.25■■□□□ 1.79
DDR1-269ENST00000512725 ABCC1P33527 1531 aa26.25■■□□□ 1.79
DDR1-269ENST00000512725 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
DDR1-269ENST00000512725 AGLP35573 1532 aa26.24■■□□□ 1.79
DDR1-269ENST00000512725 CNTLNQ9NXG0 1405 aa26.22■■□□□ 1.79
DDR1-269ENST00000512725 LTBP4Q8N2S1 1624 aa26.21■■□□□ 1.79
DDR1-269ENST00000512725 KIDINS220Q9ULH0 1771 aa26.2■■□□□ 1.79
DDR1-269ENST00000512725 NCOA1Q15788 1441 aa26.2■■□□□ 1.78
DDR1-269ENST00000512725 CAMSAP1Q5T5Y3 1602 aa26.17■■□□□ 1.78
DDR1-269ENST00000512725 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
DDR1-269ENST00000512725 NCKAP5LQ9HCH0 1330 aa26.17■■□□□ 1.78
DDR1-269ENST00000512725 CDC42BPAQ5VT25 1732 aa26.15■■□□□ 1.78
DDR1-269ENST00000512725 SUPT6HQ7KZ85 1726 aaKnown RBP26.14■■□□□ 1.77
DDR1-269ENST00000512725 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.77
DDR1-269ENST00000512725 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
DDR1-269ENST00000512725 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
DDR1-269ENST00000512725 UBAP1LF5GYI3 381 aa26.13■■□□□ 1.77
DDR1-269ENST00000512725 HNRNPMP52272 730 aaKnown RBP eCLIP26.13■■□□□ 1.77
DDR1-269ENST00000512725 CASKIN1Q8WXD9 1431 aa26.13■■□□□ 1.77
DDR1-269ENST00000512725 SAMD9LQ8IVG5 1584 aa26.12■■□□□ 1.77
DDR1-269ENST00000512725 NPATQ14207 1427 aa26.11■■□□□ 1.77
DDR1-269ENST00000512725 ZNF335Q9H4Z2 1342 aaPredicted RBP26.11■■□□□ 1.77
DDR1-269ENST00000512725 MROH2AA6NES4 1674 aa26.09■■□□□ 1.77
DDR1-269ENST00000512725 SYCP2Q9BX26 1530 aa26.09■■□□□ 1.77
DDR1-269ENST00000512725 CLTCQ00610 1675 aaKnown RBP26.07■■□□□ 1.76
DDR1-269ENST00000512725 GGT6Q6P531 493 aa26.07■■□□□ 1.76
DDR1-269ENST00000512725 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
DDR1-269ENST00000512725 PKD2Q13563 968 aa26.02■■□□□ 1.76
DDR1-269ENST00000512725 CFDP1Q9UEE9 299 aaPredicted RBP26.02■■□□□ 1.76
DDR1-269ENST00000512725 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
DDR1-269ENST00000512725 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
DDR1-269ENST00000512725 MYO3AQ8NEV4 1616 aa26■■□□□ 1.75
DDR1-269ENST00000512725 GPATCH8Q9UKJ3 1502 aaKnown RBP26■■□□□ 1.75
DDR1-269ENST00000512725 A2MP01023 1474 aa25.99■■□□□ 1.75
DDR1-269ENST00000512725 FYCO1Q9BQS8 1478 aa25.99■■□□□ 1.75
DDR1-269ENST00000512725 CEP170BQ9Y4F5 1589 aaPredicted RBP25.98■■□□□ 1.75
DDR1-269ENST00000512725 PPP6R1Q9UPN7 881 aa25.97■■□□□ 1.75
DDR1-269ENST00000512725 ZNF142P52746 1687 aaPredicted RBP25.96■■□□□ 1.75
DDR1-269ENST00000512725 CCNB3Q8WWL7 1395 aa25.96■■□□□ 1.75
DDR1-269ENST00000512725 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
DDR1-269ENST00000512725 PLA2R1Q13018 1463 aa25.95■■□□□ 1.74
DDR1-269ENST00000512725 PLEKHH2Q8IVE3 1493 aa25.94■■□□□ 1.74
DDR1-269ENST00000512725 INO80Q9ULG1 1556 aaPredicted RBP25.93■■□□□ 1.74
DDR1-269ENST00000512725 PLXNC1O60486 1568 aa25.92■■□□□ 1.74
DDR1-269ENST00000512725 KIAA1107Q9UPP5 1409 aa25.92■■□□□ 1.74
DDR1-269ENST00000512725 PIP4K2BP78356 416 aa25.92■■□□□ 1.74
DDR1-269ENST00000512725 TCOF1Q13428 1488 aaKnown RBP25.91■■□□□ 1.74
DDR1-269ENST00000512725 MTUS2Q5JR59 1369 aa25.9■■□□□ 1.74
DDR1-269ENST00000512725 ADGBQ8N7X0 1667 aa25.87■■□□□ 1.73
DDR1-269ENST00000512725 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
DDR1-269ENST00000512725 A2ML1A8K2U0 1454 aa25.85■■□□□ 1.73
DDR1-269ENST00000512725 HSPA1LP34931 641 aa25.84■■□□□ 1.73
DDR1-269ENST00000512725 DNMT1P26358 1616 aaKnown RBP25.82■■□□□ 1.72
DDR1-269ENST00000512725 TOM1O60784 492 aa25.82■■□□□ 1.72
DDR1-269ENST00000512725 FBXO31Q5XUX0 539 aaPredicted RBP25.8■■□□□ 1.72
DDR1-269ENST00000512725 KIF3BO15066 747 aa25.79■■□□□ 1.72
DDR1-269ENST00000512725 TNRQ92752 1358 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms