RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 SPDYE4A6NLX3 237 aa14.74□□□□□ -0.05
MSH3-203ENST00000512531 NEO1Q92859 1461 aa14.72□□□□□ -0.05
MSH3-203ENST00000512531 SAMD9Q5K651 1589 aa14.72□□□□□ -0.05
MSH3-203ENST00000512531 KIF21BO75037 1637 aa14.68□□□□□ -0.06
MSH3-203ENST00000512531 RAPGEF6Q8TEU7 1601 aa14.68□□□□□ -0.06
MSH3-203ENST00000512531 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
MSH3-203ENST00000512531 ADAMTSL3P82987 1691 aa14.65□□□□□ -0.06
MSH3-203ENST00000512531 HRCP23327 699 aa14.65□□□□□ -0.06
MSH3-203ENST00000512531 UBTFP17480 764 aaKnown RBP14.64□□□□□ -0.07
MSH3-203ENST00000512531 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
MSH3-203ENST00000512531 PTPRMP28827 1452 aa14.63□□□□□ -0.07
MSH3-203ENST00000512531 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
MSH3-203ENST00000512531 ARID3CA6NKF2 412 aa14.62□□□□□ -0.07
MSH3-203ENST00000512531 RAPGEF3O95398 923 aa14.62□□□□□ -0.07
MSH3-203ENST00000512531 PLEKHD1A6NEE1 506 aa14.61□□□□□ -0.07
MSH3-203ENST00000512531 VASPP50552 380 aaPredicted RBP14.6□□□□□ -0.07
MSH3-203ENST00000512531 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
MSH3-203ENST00000512531 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
MSH3-203ENST00000512531 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
MSH3-203ENST00000512531 BCORL1Q5H9F3 1711 aa14.59□□□□□ -0.07
MSH3-203ENST00000512531 ZEB1P37275 1124 aaPredicted RBP14.59□□□□□ -0.07
MSH3-203ENST00000512531 DENND4BO75064 1496 aaPredicted RBP14.58□□□□□ -0.08
MSH3-203ENST00000512531 IFNLR1Q8IU57 520 aaPredicted RBP14.58□□□□□ -0.08
MSH3-203ENST00000512531 FBXO41Q8TF61 875 aa14.58□□□□□ -0.08
MSH3-203ENST00000512531 EFCAB5A4FU69 1503 aa14.57□□□□□ -0.08
MSH3-203ENST00000512531 CFAP74Q9C0B2 1584 aa14.57□□□□□ -0.08
MSH3-203ENST00000512531 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
MSH3-203ENST00000512531 ARHGEF40Q8TER5 1519 aa14.56□□□□□ -0.08
MSH3-203ENST00000512531 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
MSH3-203ENST00000512531 PLCB2Q00722 1185 aa14.55□□□□□ -0.08
MSH3-203ENST00000512531 MAGI2Q86UL8 1455 aa14.55□□□□□ -0.08
MSH3-203ENST00000512531 APLP2Q06481 763 aa14.54□□□□□ -0.08
MSH3-203ENST00000512531 ARID4BQ4LE39 1312 aaPredicted RBP14.54□□□□□ -0.08
MSH3-203ENST00000512531 POGZQ7Z3K3 1410 aa14.54□□□□□ -0.08
MSH3-203ENST00000512531 FANCAO15360 1455 aa14.54□□□□□ -0.08
MSH3-203ENST00000512531 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
MSH3-203ENST00000512531 RICTORQ6R327 1708 aa14.54□□□□□ -0.08
MSH3-203ENST00000512531 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
MSH3-203ENST00000512531 MADDQ8WXG6 1647 aa14.52□□□□□ -0.08
MSH3-203ENST00000512531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.52□□□□□ -0.08
MSH3-203ENST00000512531 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
MSH3-203ENST00000512531 PLCH2O75038 1416 aa14.49□□□□□ -0.09
MSH3-203ENST00000512531 ZFYVE16Q7Z3T8 1539 aa14.47□□□□□ -0.09
MSH3-203ENST00000512531 TTC37Q6PGP7 1564 aa14.47□□□□□ -0.09
MSH3-203ENST00000512531 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
MSH3-203ENST00000512531 RIMS1Q86UR5 1692 aaKnown RBP14.46□□□□□ -0.1
MSH3-203ENST00000512531 PKD2Q13563 968 aa14.45□□□□□ -0.1
MSH3-203ENST00000512531 POLA2Q14181 598 aa14.45□□□□□ -0.1
MSH3-203ENST00000512531 CLIP1P30622 1438 aa14.44□□□□□ -0.1
MSH3-203ENST00000512531 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
MSH3-203ENST00000512531 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
MSH3-203ENST00000512531 SCAPERQ9BY12 1400 aa14.43□□□□□ -0.1
MSH3-203ENST00000512531 YEATS2Q9ULM3 1422 aa14.43□□□□□ -0.1
MSH3-203ENST00000512531 EFCAB2Q5VUJ9 269 aa14.43□□□□□ -0.1
MSH3-203ENST00000512531 HECW1Q76N89 1606 aa14.43□□□□□ -0.1
MSH3-203ENST00000512531 ATP10AO60312 1499 aa14.42□□□□□ -0.1
MSH3-203ENST00000512531 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
MSH3-203ENST00000512531 C9orf84Q5VXU9 1444 aa14.4□□□□□ -0.1
MSH3-203ENST00000512531 ARHGEF12Q9NZN5 1544 aa14.39□□□□□ -0.11
MSH3-203ENST00000512531 SIGLEC1Q9BZZ2 1709 aa14.38□□□□□ -0.11
MSH3-203ENST00000512531 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
MSH3-203ENST00000512531 TROQ12816 1431 aaPredicted RBP14.37□□□□□ -0.11
MSH3-203ENST00000512531 MYO5CQ9NQX4 1742 aa14.37□□□□□ -0.11
MSH3-203ENST00000512531 ARHGAP35Q9NRY4 1499 aa14.37□□□□□ -0.11
MSH3-203ENST00000512531 FER1L4A9Z1Z3 1794 aa14.37□□□□□ -0.11
MSH3-203ENST00000512531 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
MSH3-203ENST00000512531 HSPA2P54652 639 aa14.35□□□□□ -0.11
MSH3-203ENST00000512531 KDM5CP41229 1560 aa14.34□□□□□ -0.11
MSH3-203ENST00000512531 KIF14Q15058 1648 aa14.34□□□□□ -0.11
MSH3-203ENST00000512531 SETD1BQ9UPS6 1966 aaKnown RBP14.34□□□□□ -0.11
MSH3-203ENST00000512531 REREQ9P2R6 1566 aa14.34□□□□□ -0.11
MSH3-203ENST00000512531 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
MSH3-203ENST00000512531 MLECQ14165 292 aa14.32□□□□□ -0.12
MSH3-203ENST00000512531 MLH3Q9UHC1 1453 aa14.31□□□□□ -0.12
MSH3-203ENST00000512531 PREX1Q8TCU6 1659 aa14.31□□□□□ -0.12
MSH3-203ENST00000512531 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
MSH3-203ENST00000512531 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
MSH3-203ENST00000512531 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
MSH3-203ENST00000512531 ATP1B4Q9UN42 357 aaPredicted RBP14.3□□□□□ -0.12
MSH3-203ENST00000512531 AFAP1Q8N556 730 aa14.29□□□□□ -0.12
MSH3-203ENST00000512531 AGLP35573 1532 aa14.29□□□□□ -0.12
MSH3-203ENST00000512531 DIP2CQ9Y2E4 1556 aa14.27□□□□□ -0.12
MSH3-203ENST00000512531 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
MSH3-203ENST00000512531 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
MSH3-203ENST00000512531 CASKIN1Q8WXD9 1431 aa14.26□□□□□ -0.13
MSH3-203ENST00000512531 CAPN15O75808 1086 aa14.26□□□□□ -0.13
MSH3-203ENST00000512531 CNTLNQ9NXG0 1405 aa14.24□□□□□ -0.13
MSH3-203ENST00000512531 CDC42BPBQ9Y5S2 1711 aa14.24□□□□□ -0.13
MSH3-203ENST00000512531 CEBPAP49715 358 aaPredicted RBP14.24□□□□□ -0.13
MSH3-203ENST00000512531 ABCC1P33527 1531 aa14.24□□□□□ -0.13
MSH3-203ENST00000512531 PTPRTO14522 1441 aa14.24□□□□□ -0.13
MSH3-203ENST00000512531 PREX2Q70Z35 1606 aa14.23□□□□□ -0.13
MSH3-203ENST00000512531 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
MSH3-203ENST00000512531 TRAPPC8Q9Y2L5 1435 aa14.23□□□□□ -0.13
MSH3-203ENST00000512531 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
MSH3-203ENST00000512531 ABCA6Q8N139 1617 aa14.22□□□□□ -0.13
MSH3-203ENST00000512531 STRCQ7RTU9 1775 aa14.22□□□□□ -0.13
MSH3-203ENST00000512531 ESF1Q9H501 851 aaKnown RBP14.21□□□□□ -0.13
MSH3-203ENST00000512531 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
MSH3-203ENST00000512531 ABCB7O75027 752 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms