RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 ARHGEF12Q9NZN5 1544 aa20.67■□□□□ 0.9
DDR1-267ENST00000512336 ILDR2Q71H61 639 aa20.66■□□□□ 0.9
DDR1-267ENST00000512336 DISP3Q9P2K9 1392 aa20.66■□□□□ 0.9
DDR1-267ENST00000512336 PREX1Q8TCU6 1659 aa20.64■□□□□ 0.9
DDR1-267ENST00000512336 CDK13Q14004 1512 aaKnown RBP20.64■□□□□ 0.9
DDR1-267ENST00000512336 ATP10AO60312 1499 aa20.63■□□□□ 0.89
DDR1-267ENST00000512336 PLCH2O75038 1416 aa20.63■□□□□ 0.89
DDR1-267ENST00000512336 C9orf84Q5VXU9 1444 aa20.63■□□□□ 0.89
DDR1-267ENST00000512336 CEBPAP49715 358 aaPredicted RBP20.63■□□□□ 0.89
DDR1-267ENST00000512336 SOCS7O14512 581 aa20.59■□□□□ 0.89
DDR1-267ENST00000512336 STRCQ7RTU9 1775 aa20.58■□□□□ 0.89
DDR1-267ENST00000512336 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
DDR1-267ENST00000512336 EEA1Q15075 1411 aa20.56■□□□□ 0.88
DDR1-267ENST00000512336 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
DDR1-267ENST00000512336 EFCAB2Q5VUJ9 269 aa20.55■□□□□ 0.88
DDR1-267ENST00000512336 MYO5CQ9NQX4 1742 aa20.53■□□□□ 0.88
DDR1-267ENST00000512336 ZNF518AQ6AHZ1 1483 aa20.51■□□□□ 0.87
DDR1-267ENST00000512336 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
DDR1-267ENST00000512336 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
DDR1-267ENST00000512336 ATP1B4Q9UN42 357 aaPredicted RBP20.49■□□□□ 0.87
DDR1-267ENST00000512336 KIF14Q15058 1648 aa20.49■□□□□ 0.87
DDR1-267ENST00000512336 KDM5CP41229 1560 aa20.48■□□□□ 0.87
DDR1-267ENST00000512336 DIP2CQ9Y2E4 1556 aa20.47■□□□□ 0.87
DDR1-267ENST00000512336 PTPRTO14522 1441 aa20.47■□□□□ 0.87
DDR1-267ENST00000512336 MYT1LQ9UL68 1186 aa20.47■□□□□ 0.87
DDR1-267ENST00000512336 ARHGAP5Q13017 1502 aa20.47■□□□□ 0.87
DDR1-267ENST00000512336 REREQ9P2R6 1566 aa20.44■□□□□ 0.86
DDR1-267ENST00000512336 SETD1BQ9UPS6 1966 aaKnown RBP20.44■□□□□ 0.86
DDR1-267ENST00000512336 C3P01024 1663 aa20.44■□□□□ 0.86
DDR1-267ENST00000512336 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
DDR1-267ENST00000512336 ABCA6Q8N139 1617 aa20.42■□□□□ 0.86
DDR1-267ENST00000512336 LTBP4Q8N2S1 1624 aa20.42■□□□□ 0.86
DDR1-267ENST00000512336 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
DDR1-267ENST00000512336 FMN1Q68DA7 1419 aa20.42■□□□□ 0.86
DDR1-267ENST00000512336 MLH3Q9UHC1 1453 aa20.39■□□□□ 0.85
DDR1-267ENST00000512336 TRAPPC8Q9Y2L5 1435 aa20.38■□□□□ 0.85
DDR1-267ENST00000512336 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
DDR1-267ENST00000512336 AGLP35573 1532 aa20.37■□□□□ 0.85
DDR1-267ENST00000512336 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
DDR1-267ENST00000512336 ARHGAP35Q9NRY4 1499 aa20.37■□□□□ 0.85
DDR1-267ENST00000512336 NCOA1Q15788 1441 aa20.37■□□□□ 0.85
DDR1-267ENST00000512336 EHMT2Q96KQ7 1210 aa20.37■□□□□ 0.85
DDR1-267ENST00000512336 CLIP1P30622 1438 aa20.36■□□□□ 0.85
DDR1-267ENST00000512336 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
DDR1-267ENST00000512336 ABCC1P33527 1531 aa20.33■□□□□ 0.85
DDR1-267ENST00000512336 UBTFP17480 764 aaKnown RBP20.33■□□□□ 0.85
DDR1-267ENST00000512336 LRRIQ1Q96JM4 1722 aa20.31■□□□□ 0.84
DDR1-267ENST00000512336 CNTLNQ9NXG0 1405 aa20.31■□□□□ 0.84
DDR1-267ENST00000512336 ITSN2Q9NZM3 1697 aa20.3■□□□□ 0.84
DDR1-267ENST00000512336 CAMSAP1Q5T5Y3 1602 aa20.3■□□□□ 0.84
DDR1-267ENST00000512336 PREX2Q70Z35 1606 aa20.3■□□□□ 0.84
DDR1-267ENST00000512336 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
DDR1-267ENST00000512336 NPATQ14207 1427 aa20.26■□□□□ 0.83
DDR1-267ENST00000512336 ZNF335Q9H4Z2 1342 aaPredicted RBP20.26■□□□□ 0.83
DDR1-267ENST00000512336 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
DDR1-267ENST00000512336 UBAP1LF5GYI3 381 aa20.25■□□□□ 0.83
DDR1-267ENST00000512336 MROH2AA6NES4 1674 aa20.24■□□□□ 0.83
DDR1-267ENST00000512336 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
DDR1-267ENST00000512336 SAMD9LQ8IVG5 1584 aa20.21■□□□□ 0.83
DDR1-267ENST00000512336 CDC42BPAQ5VT25 1732 aa20.19■□□□□ 0.82
DDR1-267ENST00000512336 CCDC18Q5T9S5 1454 aa20.18■□□□□ 0.82
DDR1-267ENST00000512336 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
DDR1-267ENST00000512336 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
DDR1-267ENST00000512336 PLA2R1Q13018 1463 aa20.17■□□□□ 0.82
DDR1-267ENST00000512336 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
DDR1-267ENST00000512336 SUPT6HQ7KZ85 1726 aaKnown RBP20.16■□□□□ 0.82
DDR1-267ENST00000512336 PKD2Q13563 968 aa20.16■□□□□ 0.82
DDR1-267ENST00000512336 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
DDR1-267ENST00000512336 CASKIN1Q8WXD9 1431 aa20.16■□□□□ 0.82
DDR1-267ENST00000512336 SYCP2Q9BX26 1530 aa20.16■□□□□ 0.82
DDR1-267ENST00000512336 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
DDR1-267ENST00000512336 TCOF1Q13428 1488 aaKnown RBP20.15■□□□□ 0.82
DDR1-267ENST00000512336 CEP170BQ9Y4F5 1589 aaPredicted RBP20.14■□□□□ 0.81
DDR1-267ENST00000512336 PTPRKQ15262 1439 aa20.13■□□□□ 0.81
DDR1-267ENST00000512336 HNRNPMP52272 730 aaKnown RBP eCLIP20.12■□□□□ 0.81
DDR1-267ENST00000512336 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
DDR1-267ENST00000512336 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
DDR1-267ENST00000512336 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
DDR1-267ENST00000512336 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
DDR1-267ENST00000512336 A2MP01023 1474 aa20.1■□□□□ 0.81
DDR1-267ENST00000512336 GGT6Q6P531 493 aa20.09■□□□□ 0.81
DDR1-267ENST00000512336 INO80Q9ULG1 1556 aaPredicted RBP20.08■□□□□ 0.81
DDR1-267ENST00000512336 SCAF1Q9H7N4 1312 aaKnown RBP20.06■□□□□ 0.8
DDR1-267ENST00000512336 HSPA1LP34931 641 aa20.06■□□□□ 0.8
DDR1-267ENST00000512336 MED1Q15648 1581 aaPredicted RBP20.06■□□□□ 0.8
DDR1-267ENST00000512336 KIAA1107Q9UPP5 1409 aa20.05■□□□□ 0.8
DDR1-267ENST00000512336 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
DDR1-267ENST00000512336 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
DDR1-267ENST00000512336 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
DDR1-267ENST00000512336 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
DDR1-267ENST00000512336 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.8
DDR1-267ENST00000512336 CFDP1Q9UEE9 299 aaPredicted RBP20.02■□□□□ 0.8
DDR1-267ENST00000512336 CPS1P31327 1500 aa19.99■□□□□ 0.79
DDR1-267ENST00000512336 TOM1O60784 492 aa19.99■□□□□ 0.79
DDR1-267ENST00000512336 CCNB3Q8WWL7 1395 aa19.98■□□□□ 0.79
DDR1-267ENST00000512336 NEURL4Q96JN8 1562 aa19.98■□□□□ 0.79
DDR1-267ENST00000512336 ADGBQ8N7X0 1667 aa19.97■□□□□ 0.79
DDR1-267ENST00000512336 SHANK2Q9UPX8 1470 aa19.97■□□□□ 0.79
DDR1-267ENST00000512336 POLR1AO95602 1720 aaPredicted RBP19.96■□□□□ 0.79
DDR1-267ENST00000512336 TNRQ92752 1358 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms