RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 UHRF1BP1Q6BDS2 1440 aa17.35■□□□□ 0.37
PDLIM5-217ENST00000512274 ARHGEF12Q9NZN5 1544 aa17.34■□□□□ 0.37
PDLIM5-217ENST00000512274 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.36
PDLIM5-217ENST00000512274 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
PDLIM5-217ENST00000512274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.36
PDLIM5-217ENST00000512274 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
PDLIM5-217ENST00000512274 MAGI2Q86UL8 1455 aa17.31■□□□□ 0.36
PDLIM5-217ENST00000512274 PTPRTO14522 1441 aa17.31■□□□□ 0.36
PDLIM5-217ENST00000512274 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
PDLIM5-217ENST00000512274 RANGAP1P46060 587 aaPredicted RBP17.3■□□□□ 0.36
PDLIM5-217ENST00000512274 ATP10AO60312 1499 aa17.29■□□□□ 0.36
PDLIM5-217ENST00000512274 PRXQ9BXM0 1461 aa17.29■□□□□ 0.36
PDLIM5-217ENST00000512274 SCAPERQ9BY12 1400 aa17.29■□□□□ 0.36
PDLIM5-217ENST00000512274 SAMD9Q5K651 1589 aa17.28■□□□□ 0.36
PDLIM5-217ENST00000512274 C9orf84Q5VXU9 1444 aa17.27■□□□□ 0.35
PDLIM5-217ENST00000512274 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
PDLIM5-217ENST00000512274 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
PDLIM5-217ENST00000512274 C3P01024 1663 aa17.23■□□□□ 0.35
PDLIM5-217ENST00000512274 MYT1LQ9UL68 1186 aa17.23■□□□□ 0.35
PDLIM5-217ENST00000512274 ZNF335Q9H4Z2 1342 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-217ENST00000512274 PLCH2O75038 1416 aa17.17■□□□□ 0.34
PDLIM5-217ENST00000512274 NCOA1Q15788 1441 aa17.17■□□□□ 0.34
PDLIM5-217ENST00000512274 ESF1Q9H501 851 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-217ENST00000512274 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
PDLIM5-217ENST00000512274 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
PDLIM5-217ENST00000512274 NCKAP5LQ9HCH0 1330 aa17.15■□□□□ 0.34
PDLIM5-217ENST00000512274 CAMSAP1Q5T5Y3 1602 aa17.14■□□□□ 0.33
PDLIM5-217ENST00000512274 TRAPPC8Q9Y2L5 1435 aa17.14■□□□□ 0.33
PDLIM5-217ENST00000512274 AFAP1Q8N556 730 aa17.14■□□□□ 0.33
PDLIM5-217ENST00000512274 CDK13Q14004 1512 aaKnown RBP17.13■□□□□ 0.33
PDLIM5-217ENST00000512274 EFCAB2Q5VUJ9 269 aa17.13■□□□□ 0.33
PDLIM5-217ENST00000512274 MYO5CQ9NQX4 1742 aa17.13■□□□□ 0.33
PDLIM5-217ENST00000512274 HSPA1LP34931 641 aa17.12■□□□□ 0.33
PDLIM5-217ENST00000512274 EEA1Q15075 1411 aa17.11■□□□□ 0.33
PDLIM5-217ENST00000512274 DIP2CQ9Y2E4 1556 aa17.11■□□□□ 0.33
PDLIM5-217ENST00000512274 PIP4K2BP78356 416 aa17.1■□□□□ 0.33
PDLIM5-217ENST00000512274 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
PDLIM5-217ENST00000512274 ATP1B4Q9UN42 357 aaPredicted RBP17.08■□□□□ 0.32
PDLIM5-217ENST00000512274 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
PDLIM5-217ENST00000512274 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
PDLIM5-217ENST00000512274 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
PDLIM5-217ENST00000512274 KDM5CP41229 1560 aa17.06■□□□□ 0.32
PDLIM5-217ENST00000512274 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
PDLIM5-217ENST00000512274 REREQ9P2R6 1566 aa17.03■□□□□ 0.32
PDLIM5-217ENST00000512274 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
PDLIM5-217ENST00000512274 KIF14Q15058 1648 aa17.03■□□□□ 0.32
PDLIM5-217ENST00000512274 AGLP35573 1532 aa17.01■□□□□ 0.31
PDLIM5-217ENST00000512274 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
PDLIM5-217ENST00000512274 CNTLNQ9NXG0 1405 aa16.99■□□□□ 0.31
PDLIM5-217ENST00000512274 PKD2Q13563 968 aa16.99■□□□□ 0.31
PDLIM5-217ENST00000512274 TOM1O60784 492 aa16.97■□□□□ 0.31
PDLIM5-217ENST00000512274 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
PDLIM5-217ENST00000512274 ZMYM3Q14202 1370 aa16.97■□□□□ 0.31
PDLIM5-217ENST00000512274 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
PDLIM5-217ENST00000512274 NPATQ14207 1427 aa16.96■□□□□ 0.31
PDLIM5-217ENST00000512274 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
PDLIM5-217ENST00000512274 CDC42BPBQ9Y5S2 1711 aa16.96■□□□□ 0.3
PDLIM5-217ENST00000512274 MYO3AQ8NEV4 1616 aa16.95■□□□□ 0.3
PDLIM5-217ENST00000512274 KIDINS220Q9ULH0 1771 aa16.94■□□□□ 0.3
PDLIM5-217ENST00000512274 ZNF142P52746 1687 aaPredicted RBP16.94■□□□□ 0.3
PDLIM5-217ENST00000512274 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
PDLIM5-217ENST00000512274 CLTCQ00610 1675 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-217ENST00000512274 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
PDLIM5-217ENST00000512274 PLA2R1Q13018 1463 aa16.93■□□□□ 0.3
PDLIM5-217ENST00000512274 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
PDLIM5-217ENST00000512274 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
PDLIM5-217ENST00000512274 TROQ12816 1431 aaPredicted RBP16.88■□□□□ 0.29
PDLIM5-217ENST00000512274 ABCC1P33527 1531 aa16.88■□□□□ 0.29
PDLIM5-217ENST00000512274 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
PDLIM5-217ENST00000512274 CLIP1P30622 1438 aa16.87■□□□□ 0.29
PDLIM5-217ENST00000512274 CPS1P31327 1500 aa16.86■□□□□ 0.29
PDLIM5-217ENST00000512274 PTPRKQ15262 1439 aa16.85■□□□□ 0.29
PDLIM5-217ENST00000512274 SHANK2Q9UPX8 1470 aa16.85■□□□□ 0.29
PDLIM5-217ENST00000512274 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
PDLIM5-217ENST00000512274 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
PDLIM5-217ENST00000512274 GGT6Q6P531 493 aa16.84■□□□□ 0.29
PDLIM5-217ENST00000512274 POLR1AO95602 1720 aaPredicted RBP16.84■□□□□ 0.29
PDLIM5-217ENST00000512274 DNMT1P26358 1616 aaKnown RBP16.83■□□□□ 0.28
PDLIM5-217ENST00000512274 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
PDLIM5-217ENST00000512274 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
PDLIM5-217ENST00000512274 ZNF777Q9ULD5 760 aaPredicted RBP16.82■□□□□ 0.28
PDLIM5-217ENST00000512274 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
PDLIM5-217ENST00000512274 FMN1Q68DA7 1419 aa16.81■□□□□ 0.28
PDLIM5-217ENST00000512274 NEURL4Q96JN8 1562 aa16.8■□□□□ 0.28
PDLIM5-217ENST00000512274 A2ML1A8K2U0 1454 aa16.8■□□□□ 0.28
PDLIM5-217ENST00000512274 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
PDLIM5-217ENST00000512274 SPAG9O60271 1321 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-217ENST00000512274 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
PDLIM5-217ENST00000512274 VWDEQ8N2E2 1590 aa16.75■□□□□ 0.27
PDLIM5-217ENST00000512274 SYCP2Q9BX26 1530 aa16.75■□□□□ 0.27
PDLIM5-217ENST00000512274 A2MP01023 1474 aa16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 POTEAQ6S8J7 498 aa16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 ANKLE2Q86XL3 938 aa16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
PDLIM5-217ENST00000512274 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
PDLIM5-217ENST00000512274 FBXO31Q5XUX0 539 aaPredicted RBP16.72■□□□□ 0.27
PDLIM5-217ENST00000512274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDLIM5-217ENST00000512274 LOC105371045A0A1W2PR82 267 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms