RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
SNCAIP-216ENST00000512146 KIF14Q15058 1648 aa21.42■■□□□ 1.02
SNCAIP-216ENST00000512146 DENND4BO75064 1496 aaPredicted RBP21.4■■□□□ 1.02
SNCAIP-216ENST00000512146 KDM6BO15054 1643 aa21.39■■□□□ 1.02
SNCAIP-216ENST00000512146 PLEKHD1A6NEE1 506 aa21.39■■□□□ 1.02
SNCAIP-216ENST00000512146 CFDP1Q9UEE9 299 aaPredicted RBP21.39■■□□□ 1.02
SNCAIP-216ENST00000512146 CAMSAP2Q08AD1 1489 aa21.39■■□□□ 1.01
SNCAIP-216ENST00000512146 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.01
SNCAIP-216ENST00000512146 TONSLQ96HA7 1378 aa21.34■■□□□ 1.01
SNCAIP-216ENST00000512146 ADGRL2O95490 1459 aa21.33■■□□□ 1.01
SNCAIP-216ENST00000512146 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
SNCAIP-216ENST00000512146 NCOA1Q15788 1441 aa21.31■■□□□ 1
SNCAIP-216ENST00000512146 MPHOSPH9Q99550 1183 aa21.31■■□□□ 1
SNCAIP-216ENST00000512146 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
SNCAIP-216ENST00000512146 TRIM52Q96A61 297 aa21.29■■□□□ 1
SNCAIP-216ENST00000512146 CDC42BPAQ5VT25 1732 aa21.27■■□□□ 1
SNCAIP-216ENST00000512146 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
SNCAIP-216ENST00000512146 CROCC2H7BZ55 1655 aa21.26■□□□□ 0.99
SNCAIP-216ENST00000512146 SHANK2Q9UPX8 1470 aa21.26■□□□□ 0.99
SNCAIP-216ENST00000512146 ADGBQ8N7X0 1667 aa21.25■□□□□ 0.99
SNCAIP-216ENST00000512146 SCAF1Q9H7N4 1312 aaKnown RBP21.24■□□□□ 0.99
SNCAIP-216ENST00000512146 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
SNCAIP-216ENST00000512146 ABCC2Q92887 1545 aa21.22■□□□□ 0.99
SNCAIP-216ENST00000512146 ERCC6L2Q5T890 1561 aa21.22■□□□□ 0.99
SNCAIP-216ENST00000512146 ZNF777Q9ULD5 760 aaPredicted RBP21.22■□□□□ 0.99
SNCAIP-216ENST00000512146 ANKRD30BQ9BXX2 1392 aa21.22■□□□□ 0.99
SNCAIP-216ENST00000512146 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
SNCAIP-216ENST00000512146 PZPP20742 1482 aa21.18■□□□□ 0.98
SNCAIP-216ENST00000512146 MBD5Q9P267 1494 aa21.17■□□□□ 0.98
SNCAIP-216ENST00000512146 UHRF1BP1LA0JNW5 1464 aa21.17■□□□□ 0.98
SNCAIP-216ENST00000512146 C9orf84Q5VXU9 1444 aa21.16■□□□□ 0.98
SNCAIP-216ENST00000512146 RPRD2Q5VT52 1461 aaKnown RBP21.15■□□□□ 0.98
SNCAIP-216ENST00000512146 PREX2Q70Z35 1606 aa21.15■□□□□ 0.98
SNCAIP-216ENST00000512146 ANKRD50Q9ULJ7 1429 aa21.14■□□□□ 0.97
SNCAIP-216ENST00000512146 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
SNCAIP-216ENST00000512146 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
SNCAIP-216ENST00000512146 SAMD9LQ8IVG5 1584 aa21.11■□□□□ 0.97
SNCAIP-216ENST00000512146 FOXD1Q16676 465 aa21.11■□□□□ 0.97
SNCAIP-216ENST00000512146 CDC42BPBQ9Y5S2 1711 aa21.1■□□□□ 0.97
SNCAIP-216ENST00000512146 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
SNCAIP-216ENST00000512146 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
SNCAIP-216ENST00000512146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.1■□□□□ 0.97
SNCAIP-216ENST00000512146 CCDC141Q6ZP82 1450 aa21.09■□□□□ 0.97
SNCAIP-216ENST00000512146 L3MBTL2Q969R5 705 aa21.08■□□□□ 0.97
SNCAIP-216ENST00000512146 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.97
SNCAIP-216ENST00000512146 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.96
SNCAIP-216ENST00000512146 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.96
SNCAIP-216ENST00000512146 TTC37Q6PGP7 1564 aa21.07■□□□□ 0.96
SNCAIP-216ENST00000512146 KDM5DQ9BY66 1539 aa21.07■□□□□ 0.96
SNCAIP-216ENST00000512146 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.96
SNCAIP-216ENST00000512146 DDX10Q13206 875 aaKnown RBP21.05■□□□□ 0.96
SNCAIP-216ENST00000512146 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
SNCAIP-216ENST00000512146 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
SNCAIP-216ENST00000512146 MAST1Q9Y2H9 1570 aa21.03■□□□□ 0.96
SNCAIP-216ENST00000512146 ZCCHC11Q5TAX3 1644 aaKnown RBP21.02■□□□□ 0.95
SNCAIP-216ENST00000512146 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
SNCAIP-216ENST00000512146 ARHGAP5Q13017 1502 aa21.01■□□□□ 0.95
SNCAIP-216ENST00000512146 PLCH2O75038 1416 aa20.99■□□□□ 0.95
SNCAIP-216ENST00000512146 PKD2Q13563 968 aa20.99■□□□□ 0.95
SNCAIP-216ENST00000512146 SYCP2Q9BX26 1530 aa20.99■□□□□ 0.95
SNCAIP-216ENST00000512146 NUP155O75694 1391 aa20.98■□□□□ 0.95
SNCAIP-216ENST00000512146 MYO5CQ9NQX4 1742 aa20.98■□□□□ 0.95
SNCAIP-216ENST00000512146 GTF3C3Q9Y5Q9 886 aa20.97■□□□□ 0.95
SNCAIP-216ENST00000512146 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
SNCAIP-216ENST00000512146 EIF4G2P78344 907 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNCAIP-216ENST00000512146 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
SNCAIP-216ENST00000512146 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
SNCAIP-216ENST00000512146 ARAP3Q8WWN8 1544 aa20.92■□□□□ 0.94
SNCAIP-216ENST00000512146 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
SNCAIP-216ENST00000512146 KCNH8Q96L42 1107 aa20.91■□□□□ 0.94
SNCAIP-216ENST00000512146 EFCAB2Q5VUJ9 269 aa20.9■□□□□ 0.94
SNCAIP-216ENST00000512146 SPATA31E1Q6ZUB1 1445 aa20.89■□□□□ 0.93
SNCAIP-216ENST00000512146 CCER2I3L3R5 266 aa20.89■□□□□ 0.93
SNCAIP-216ENST00000512146 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
SNCAIP-216ENST00000512146 ABCC1P33527 1531 aa20.87■□□□□ 0.93
SNCAIP-216ENST00000512146 FAM135AQ9P2D6 1515 aa20.86■□□□□ 0.93
SNCAIP-216ENST00000512146 UNC13BO14795 1591 aa20.86■□□□□ 0.93
SNCAIP-216ENST00000512146 ANP32CO43423 234 aa20.85■□□□□ 0.93
SNCAIP-216ENST00000512146 UHRF1BP1Q6BDS2 1440 aa20.85■□□□□ 0.93
SNCAIP-216ENST00000512146 WDR7Q9Y4E6 1490 aa20.85■□□□□ 0.93
SNCAIP-216ENST00000512146 DUOX2Q9NRD8 1548 aa20.85■□□□□ 0.93
SNCAIP-216ENST00000512146 ERBINQ96RT1 1412 aa20.82■□□□□ 0.92
SNCAIP-216ENST00000512146 MAGI2Q86UL8 1455 aa20.82■□□□□ 0.92
SNCAIP-216ENST00000512146 RTEL1-TNFRSF6BF6WH68 1400 aa20.8■□□□□ 0.92
SNCAIP-216ENST00000512146 TRAPPC8Q9Y2L5 1435 aa20.8■□□□□ 0.92
SNCAIP-216ENST00000512146 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
SNCAIP-216ENST00000512146 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
SNCAIP-216ENST00000512146 IQGAP3Q86VI3 1631 aa20.78■□□□□ 0.92
SNCAIP-216ENST00000512146 ABCA9Q8IUA7 1624 aa20.77■□□□□ 0.92
SNCAIP-216ENST00000512146 C11orf95C9JLR9 678 aaPredicted RBP20.76■□□□□ 0.91
SNCAIP-216ENST00000512146 RALGAPBQ86X10 1494 aa20.76■□□□□ 0.91
SNCAIP-216ENST00000512146 PLA2R1Q13018 1463 aa20.75■□□□□ 0.91
SNCAIP-216ENST00000512146 CNTLNQ9NXG0 1405 aa20.75■□□□□ 0.91
SNCAIP-216ENST00000512146 ATP10AO60312 1499 aa20.74■□□□□ 0.91
SNCAIP-216ENST00000512146 ASXL2Q76L83 1435 aa20.72■□□□□ 0.91
SNCAIP-216ENST00000512146 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
SNCAIP-216ENST00000512146 FANCAO15360 1455 aa20.71■□□□□ 0.91
SNCAIP-216ENST00000512146 SPAG9O60271 1321 aaKnown RBP20.71■□□□□ 0.91
SNCAIP-216ENST00000512146 USP47Q96K76 1375 aa20.7■□□□□ 0.9
SNCAIP-216ENST00000512146 CCDC144AA2RUR9 1427 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms