RNA–Protein interactions for RNA: ENST00000511831.1

YIPF3-215, Transcript of Yip1 domain family member 3, humanhuman

TSL 4

Gene YIPF3, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-215ENST00000511831 CEBPAP49715 358 aaPredicted RBP17.42■□□□□ 0.38
YIPF3-215ENST00000511831 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
YIPF3-215ENST00000511831 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
YIPF3-215ENST00000511831 ARHGEF12Q9NZN5 1544 aa17.4■□□□□ 0.38
YIPF3-215ENST00000511831 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
YIPF3-215ENST00000511831 PLCH2O75038 1416 aa17.38■□□□□ 0.37
YIPF3-215ENST00000511831 C9orf84Q5VXU9 1444 aa17.38■□□□□ 0.37
YIPF3-215ENST00000511831 PREX1Q8TCU6 1659 aa17.37■□□□□ 0.37
YIPF3-215ENST00000511831 ATP10AO60312 1499 aa17.37■□□□□ 0.37
YIPF3-215ENST00000511831 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
YIPF3-215ENST00000511831 ATP1B4Q9UN42 357 aaPredicted RBP17.34■□□□□ 0.37
YIPF3-215ENST00000511831 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
YIPF3-215ENST00000511831 EEA1Q15075 1411 aa17.32■□□□□ 0.36
YIPF3-215ENST00000511831 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
YIPF3-215ENST00000511831 KIF14Q15058 1648 aa17.31■□□□□ 0.36
YIPF3-215ENST00000511831 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
YIPF3-215ENST00000511831 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
YIPF3-215ENST00000511831 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
YIPF3-215ENST00000511831 MYT1LQ9UL68 1186 aa17.28■□□□□ 0.36
YIPF3-215ENST00000511831 ZNF518AQ6AHZ1 1483 aa17.27■□□□□ 0.36
YIPF3-215ENST00000511831 SOCS7O14512 581 aa17.27■□□□□ 0.36
YIPF3-215ENST00000511831 DIP2CQ9Y2E4 1556 aa17.27■□□□□ 0.35
YIPF3-215ENST00000511831 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
YIPF3-215ENST00000511831 KDM5CP41229 1560 aa17.26■□□□□ 0.35
YIPF3-215ENST00000511831 SPATA31D1Q6ZQQ2 1576 aa17.25■□□□□ 0.35
YIPF3-215ENST00000511831 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
YIPF3-215ENST00000511831 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
YIPF3-215ENST00000511831 C3P01024 1663 aa17.23■□□□□ 0.35
YIPF3-215ENST00000511831 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-215ENST00000511831 ARHGAP35Q9NRY4 1499 aa17.21■□□□□ 0.35
YIPF3-215ENST00000511831 PTPRTO14522 1441 aa17.21■□□□□ 0.34
YIPF3-215ENST00000511831 FMN1Q68DA7 1419 aa17.21■□□□□ 0.34
YIPF3-215ENST00000511831 LTBP4Q8N2S1 1624 aa17.19■□□□□ 0.34
YIPF3-215ENST00000511831 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
YIPF3-215ENST00000511831 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
YIPF3-215ENST00000511831 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
YIPF3-215ENST00000511831 REREQ9P2R6 1566 aa17.18■□□□□ 0.34
YIPF3-215ENST00000511831 LRRIQ1Q96JM4 1722 aa17.18■□□□□ 0.34
YIPF3-215ENST00000511831 CLIP1P30622 1438 aa17.17■□□□□ 0.34
YIPF3-215ENST00000511831 SETD1BQ9UPS6 1966 aaKnown RBP17.17■□□□□ 0.34
YIPF3-215ENST00000511831 CDC42BPBQ9Y5S2 1711 aa17.16■□□□□ 0.34
YIPF3-215ENST00000511831 MLH3Q9UHC1 1453 aa17.16■□□□□ 0.34
YIPF3-215ENST00000511831 NCOA1Q15788 1441 aa17.15■□□□□ 0.34
YIPF3-215ENST00000511831 ESF1Q9H501 851 aaKnown RBP17.15■□□□□ 0.34
YIPF3-215ENST00000511831 ABCC1P33527 1531 aa17.15■□□□□ 0.34
YIPF3-215ENST00000511831 AGLP35573 1532 aa17.14■□□□□ 0.33
YIPF3-215ENST00000511831 PREX2Q70Z35 1606 aa17.13■□□□□ 0.33
YIPF3-215ENST00000511831 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
YIPF3-215ENST00000511831 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
YIPF3-215ENST00000511831 CAMSAP1Q5T5Y3 1602 aa17.1■□□□□ 0.33
YIPF3-215ENST00000511831 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
YIPF3-215ENST00000511831 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
YIPF3-215ENST00000511831 CNTLNQ9NXG0 1405 aa17.08■□□□□ 0.32
YIPF3-215ENST00000511831 ZNF335Q9H4Z2 1342 aaPredicted RBP17.08■□□□□ 0.32
YIPF3-215ENST00000511831 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
YIPF3-215ENST00000511831 SAMD9LQ8IVG5 1584 aa17.05■□□□□ 0.32
YIPF3-215ENST00000511831 CDC42BPAQ5VT25 1732 aa17.04■□□□□ 0.32
YIPF3-215ENST00000511831 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
YIPF3-215ENST00000511831 ZMYM3Q14202 1370 aa17.03■□□□□ 0.32
YIPF3-215ENST00000511831 SYCP2Q9BX26 1530 aa17.03■□□□□ 0.32
YIPF3-215ENST00000511831 MROH2AA6NES4 1674 aa17.03■□□□□ 0.32
YIPF3-215ENST00000511831 NPATQ14207 1427 aa17.03■□□□□ 0.32
YIPF3-215ENST00000511831 SUPT6HQ7KZ85 1726 aaKnown RBP17.02■□□□□ 0.32
YIPF3-215ENST00000511831 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
YIPF3-215ENST00000511831 MYO3AQ8NEV4 1616 aa17.01■□□□□ 0.31
YIPF3-215ENST00000511831 CCDC18Q5T9S5 1454 aa17■□□□□ 0.31
YIPF3-215ENST00000511831 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
YIPF3-215ENST00000511831 CASKIN1Q8WXD9 1431 aa17■□□□□ 0.31
YIPF3-215ENST00000511831 SPAG9O60271 1321 aaKnown RBP16.99■□□□□ 0.31
YIPF3-215ENST00000511831 ZNF142P52746 1687 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-215ENST00000511831 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
YIPF3-215ENST00000511831 PTPRKQ15262 1439 aa16.96■□□□□ 0.31
YIPF3-215ENST00000511831 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
YIPF3-215ENST00000511831 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
YIPF3-215ENST00000511831 GPATCH8Q9UKJ3 1502 aaKnown RBP16.96■□□□□ 0.3
YIPF3-215ENST00000511831 PLXNC1O60486 1568 aa16.95■□□□□ 0.3
YIPF3-215ENST00000511831 PLA2R1Q13018 1463 aa16.95■□□□□ 0.3
YIPF3-215ENST00000511831 GGT6Q6P531 493 aa16.95■□□□□ 0.3
YIPF3-215ENST00000511831 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
YIPF3-215ENST00000511831 A2MP01023 1474 aa16.94■□□□□ 0.3
YIPF3-215ENST00000511831 PKD2Q13563 968 aa16.94■□□□□ 0.3
YIPF3-215ENST00000511831 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
YIPF3-215ENST00000511831 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
YIPF3-215ENST00000511831 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
YIPF3-215ENST00000511831 PIP4K2BP78356 416 aa16.91■□□□□ 0.3
YIPF3-215ENST00000511831 HSPA1LP34931 641 aa16.9■□□□□ 0.3
YIPF3-215ENST00000511831 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
YIPF3-215ENST00000511831 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.29
YIPF3-215ENST00000511831 CHIC1Q5VXU3 224 aa16.88■□□□□ 0.29
YIPF3-215ENST00000511831 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
YIPF3-215ENST00000511831 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
YIPF3-215ENST00000511831 CCNB3Q8WWL7 1395 aa16.87■□□□□ 0.29
YIPF3-215ENST00000511831 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
YIPF3-215ENST00000511831 ZNF644Q9H582 1327 aaPredicted RBP16.86■□□□□ 0.29
YIPF3-215ENST00000511831 PLEKHH2Q8IVE3 1493 aa16.86■□□□□ 0.29
YIPF3-215ENST00000511831 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
YIPF3-215ENST00000511831 FBXO31Q5XUX0 539 aaPredicted RBP16.84■□□□□ 0.29
YIPF3-215ENST00000511831 ADGBQ8N7X0 1667 aa16.83■□□□□ 0.28
YIPF3-215ENST00000511831 POLR1AO95602 1720 aaPredicted RBP16.82■□□□□ 0.28
YIPF3-215ENST00000511831 SHANK2Q9UPX8 1470 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms