RNA–Protein interactions for RNA: ENST00000511115.5

PCDH18-205, Transcript of protocadherin 18, humanhuman

TSL 2 BASIC

Gene PCDH18, Length 1,331 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-205ENST00000511115 PRXQ9BXM0 1461 aa13.38□□□□□ -0.27
PCDH18-205ENST00000511115 TTC37Q6PGP7 1564 aa13.38□□□□□ -0.27
PCDH18-205ENST00000511115 PREX1Q8TCU6 1659 aa13.37□□□□□ -0.27
PCDH18-205ENST00000511115 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
PCDH18-205ENST00000511115 EFCAB5A4FU69 1503 aa13.36□□□□□ -0.27
PCDH18-205ENST00000511115 CFAP74Q9C0B2 1584 aa13.36□□□□□ -0.27
PCDH18-205ENST00000511115 PLEKHD1A6NEE1 506 aa13.36□□□□□ -0.27
PCDH18-205ENST00000511115 DMRT2Q9Y5R5 561 aa13.36□□□□□ -0.27
PCDH18-205ENST00000511115 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
PCDH18-205ENST00000511115 NUP153P49790 1475 aaKnown RBP13.34□□□□□ -0.27
PCDH18-205ENST00000511115 HECW1Q76N89 1606 aa13.34□□□□□ -0.27
PCDH18-205ENST00000511115 SAMD9Q5K651 1589 aa13.34□□□□□ -0.27
PCDH18-205ENST00000511115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCDH18-205ENST00000511115 RANGAP1P46060 587 aaPredicted RBP13.33□□□□□ -0.28
PCDH18-205ENST00000511115 MAGI2Q86UL8 1455 aa13.32□□□□□ -0.28
PCDH18-205ENST00000511115 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
PCDH18-205ENST00000511115 ARHGEF12Q9NZN5 1544 aa13.31□□□□□ -0.28
PCDH18-205ENST00000511115 SETD1BQ9UPS6 1966 aaKnown RBP13.29□□□□□ -0.28
PCDH18-205ENST00000511115 UHRF1BP1Q6BDS2 1440 aa13.28□□□□□ -0.28
PCDH18-205ENST00000511115 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
PCDH18-205ENST00000511115 ATP10AO60312 1499 aa13.28□□□□□ -0.28
PCDH18-205ENST00000511115 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
PCDH18-205ENST00000511115 PTPRTO14522 1441 aa13.25□□□□□ -0.29
PCDH18-205ENST00000511115 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
PCDH18-205ENST00000511115 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
PCDH18-205ENST00000511115 MYT1LQ9UL68 1186 aa13.23□□□□□ -0.29
PCDH18-205ENST00000511115 PLCH2O75038 1416 aa13.22□□□□□ -0.29
PCDH18-205ENST00000511115 EEA1Q15075 1411 aa13.22□□□□□ -0.29
PCDH18-205ENST00000511115 C3P01024 1663 aa13.21□□□□□ -0.29
PCDH18-205ENST00000511115 CSRNP3Q8WYN3 585 aa13.2□□□□□ -0.3
PCDH18-205ENST00000511115 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
PCDH18-205ENST00000511115 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
PCDH18-205ENST00000511115 IQSEC2Q5JU85 1478 aa13.19□□□□□ -0.3
PCDH18-205ENST00000511115 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
PCDH18-205ENST00000511115 AFAP1Q8N556 730 aa13.18□□□□□ -0.3
PCDH18-205ENST00000511115 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
PCDH18-205ENST00000511115 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
PCDH18-205ENST00000511115 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
PCDH18-205ENST00000511115 NCOA1Q15788 1441 aa13.16□□□□□ -0.3
PCDH18-205ENST00000511115 ZNF518AQ6AHZ1 1483 aa13.15□□□□□ -0.3
PCDH18-205ENST00000511115 DIP2CQ9Y2E4 1556 aa13.15□□□□□ -0.3
PCDH18-205ENST00000511115 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
PCDH18-205ENST00000511115 ZNF335Q9H4Z2 1342 aaPredicted RBP13.14□□□□□ -0.31
PCDH18-205ENST00000511115 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
PCDH18-205ENST00000511115 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
PCDH18-205ENST00000511115 KDM5CP41229 1560 aa13.13□□□□□ -0.31
PCDH18-205ENST00000511115 KIF14Q15058 1648 aa13.11□□□□□ -0.31
PCDH18-205ENST00000511115 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
PCDH18-205ENST00000511115 ARHGAP5Q13017 1502 aa13.11□□□□□ -0.31
PCDH18-205ENST00000511115 REREQ9P2R6 1566 aa13.1□□□□□ -0.31
PCDH18-205ENST00000511115 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.31
PCDH18-205ENST00000511115 AGLP35573 1532 aa13.07□□□□□ -0.32
PCDH18-205ENST00000511115 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
PCDH18-205ENST00000511115 HSPA1LP34931 641 aa13.07□□□□□ -0.32
PCDH18-205ENST00000511115 CDK11AQ9UQ88 783 aaPredicted RBP13.07□□□□□ -0.32
PCDH18-205ENST00000511115 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
PCDH18-205ENST00000511115 SUPT6HQ7KZ85 1726 aaKnown RBP13.07□□□□□ -0.32
PCDH18-205ENST00000511115 CDC42BPBQ9Y5S2 1711 aa13.06□□□□□ -0.32
PCDH18-205ENST00000511115 PIP4K2BP78356 416 aa13.06□□□□□ -0.32
PCDH18-205ENST00000511115 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
PCDH18-205ENST00000511115 ZMYM3Q14202 1370 aa13.04□□□□□ -0.32
PCDH18-205ENST00000511115 KIDINS220Q9ULH0 1771 aa13.04□□□□□ -0.32
PCDH18-205ENST00000511115 MROH2AA6NES4 1674 aa13.03□□□□□ -0.32
PCDH18-205ENST00000511115 PKD2Q13563 968 aa13.03□□□□□ -0.32
PCDH18-205ENST00000511115 TROQ12816 1431 aaPredicted RBP13.03□□□□□ -0.32
PCDH18-205ENST00000511115 NPATQ14207 1427 aa13.03□□□□□ -0.32
PCDH18-205ENST00000511115 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
PCDH18-205ENST00000511115 ITSN2Q9NZM3 1697 aa13.02□□□□□ -0.33
PCDH18-205ENST00000511115 CLIP1P30622 1438 aa13.01□□□□□ -0.33
PCDH18-205ENST00000511115 LRRIQ1Q96JM4 1722 aa13□□□□□ -0.33
PCDH18-205ENST00000511115 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
PCDH18-205ENST00000511115 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
PCDH18-205ENST00000511115 ABCC1P33527 1531 aa13□□□□□ -0.33
PCDH18-205ENST00000511115 ZNF142P52746 1687 aaPredicted RBP12.99□□□□□ -0.33
PCDH18-205ENST00000511115 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
PCDH18-205ENST00000511115 FMN1Q68DA7 1419 aa12.99□□□□□ -0.33
PCDH18-205ENST00000511115 TOM1O60784 492 aa12.99□□□□□ -0.33
PCDH18-205ENST00000511115 PREX2Q70Z35 1606 aa12.99□□□□□ -0.33
PCDH18-205ENST00000511115 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
PCDH18-205ENST00000511115 TCOF1Q13428 1488 aaKnown RBP12.98□□□□□ -0.33
PCDH18-205ENST00000511115 UBTFP17480 764 aaKnown RBP12.96□□□□□ -0.33
PCDH18-205ENST00000511115 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
PCDH18-205ENST00000511115 GGT6Q6P531 493 aa12.95□□□□□ -0.34
PCDH18-205ENST00000511115 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
PCDH18-205ENST00000511115 PTPRKQ15262 1439 aa12.95□□□□□ -0.34
PCDH18-205ENST00000511115 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
PCDH18-205ENST00000511115 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
PCDH18-205ENST00000511115 SPAG9O60271 1321 aaKnown RBP12.93□□□□□ -0.34
PCDH18-205ENST00000511115 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
PCDH18-205ENST00000511115 CPS1P31327 1500 aa12.92□□□□□ -0.34
PCDH18-205ENST00000511115 DNMT1P26358 1616 aaKnown RBP12.91□□□□□ -0.34
PCDH18-205ENST00000511115 SHANK2Q9UPX8 1470 aa12.91□□□□□ -0.34
PCDH18-205ENST00000511115 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
PCDH18-205ENST00000511115 SYCP2Q9BX26 1530 aa12.9□□□□□ -0.34
PCDH18-205ENST00000511115 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
PCDH18-205ENST00000511115 A2MP01023 1474 aa12.88□□□□□ -0.35
PCDH18-205ENST00000511115 NEURL4Q96JN8 1562 aa12.88□□□□□ -0.35
PCDH18-205ENST00000511115 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
PCDH18-205ENST00000511115 ALKQ9UM73 1620 aa12.87□□□□□ -0.35
PCDH18-205ENST00000511115 PLXNC1O60486 1568 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms