RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 HSPA2P54652 639 aa17.65■□□□□ 0.42
LIN54-210ENST00000510877 CNGB1Q14028 1251 aaPredicted RBP17.64■□□□□ 0.41
LIN54-210ENST00000510877 ABCC2Q92887 1545 aa17.63■□□□□ 0.41
LIN54-210ENST00000510877 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
LIN54-210ENST00000510877 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
LIN54-210ENST00000510877 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
LIN54-210ENST00000510877 PRXQ9BXM0 1461 aa17.6■□□□□ 0.41
LIN54-210ENST00000510877 ARHGAP35Q9NRY4 1499 aa17.6■□□□□ 0.41
LIN54-210ENST00000510877 TXNDC2Q86VQ3 553 aa17.59■□□□□ 0.41
LIN54-210ENST00000510877 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
LIN54-210ENST00000510877 RIMBP3CA6NJZ7 1639 aa17.58■□□□□ 0.41
LIN54-210ENST00000510877 RIMBP3BA6NNM3 1639 aa17.58■□□□□ 0.41
LIN54-210ENST00000510877 RIMBP3Q9UFD9 1639 aa17.58■□□□□ 0.41
LIN54-210ENST00000510877 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.41
LIN54-210ENST00000510877 ADGRL1O94910 1474 aa17.58■□□□□ 0.4
LIN54-210ENST00000510877 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
LIN54-210ENST00000510877 CHD1O14646 1710 aa17.56■□□□□ 0.4
LIN54-210ENST00000510877 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
LIN54-210ENST00000510877 NUTM2DQ5VT03 806 aaPredicted RBP17.56■□□□□ 0.4
LIN54-210ENST00000510877 ATF3P18847 181 aa17.56■□□□□ 0.4
LIN54-210ENST00000510877 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
LIN54-210ENST00000510877 TRIM26Q12899 539 aaPredicted RBP17.54■□□□□ 0.4
LIN54-210ENST00000510877 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
LIN54-210ENST00000510877 FANCAO15360 1455 aa17.54■□□□□ 0.4
LIN54-210ENST00000510877 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
LIN54-210ENST00000510877 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
LIN54-210ENST00000510877 NUP155O75694 1391 aa17.53■□□□□ 0.4
LIN54-210ENST00000510877 STK26Q9P289 416 aa17.53■□□□□ 0.4
LIN54-210ENST00000510877 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
LIN54-210ENST00000510877 PPP6R1Q9UPN7 881 aa17.52■□□□□ 0.4
LIN54-210ENST00000510877 TOM1O60784 492 aa17.51■□□□□ 0.39
LIN54-210ENST00000510877 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.51■□□□□ 0.39
LIN54-210ENST00000510877 PLEKHH2Q8IVE3 1493 aa17.51■□□□□ 0.39
LIN54-210ENST00000510877 EFCAB5A4FU69 1503 aa17.49■□□□□ 0.39
LIN54-210ENST00000510877 HRCP23327 699 aa17.49■□□□□ 0.39
LIN54-210ENST00000510877 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
LIN54-210ENST00000510877 CASKIN1Q8WXD9 1431 aa17.45■□□□□ 0.38
LIN54-210ENST00000510877 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIN54-210ENST00000510877 ABCC10Q5T3U5 1492 aa17.45■□□□□ 0.38
LIN54-210ENST00000510877 PKD2Q13563 968 aa17.43■□□□□ 0.38
LIN54-210ENST00000510877 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
LIN54-210ENST00000510877 ATP10BO94823 1461 aa17.43■□□□□ 0.38
LIN54-210ENST00000510877 PAK3O75914 559 aaPredicted RBP17.41■□□□□ 0.38
LIN54-210ENST00000510877 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
LIN54-210ENST00000510877 MYOM3Q5VTT5 1437 aa17.39■□□□□ 0.37
LIN54-210ENST00000510877 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
LIN54-210ENST00000510877 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
LIN54-210ENST00000510877 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
LIN54-210ENST00000510877 FOXD1Q16676 465 aa17.38■□□□□ 0.37
LIN54-210ENST00000510877 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
LIN54-210ENST00000510877 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
LIN54-210ENST00000510877 HECW1Q76N89 1606 aa17.37■□□□□ 0.37
LIN54-210ENST00000510877 NEFMP07197 916 aa17.37■□□□□ 0.37
LIN54-210ENST00000510877 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
LIN54-210ENST00000510877 KDM6BO15054 1643 aa17.36■□□□□ 0.37
LIN54-210ENST00000510877 SLC26A8Q96RN1 970 aa17.36■□□□□ 0.37
LIN54-210ENST00000510877 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
LIN54-210ENST00000510877 NUTM2BA6NNL0 878 aaPredicted RBP17.34■□□□□ 0.37
LIN54-210ENST00000510877 NUTM2EB1AL46 878 aaPredicted RBP17.34■□□□□ 0.37
LIN54-210ENST00000510877 NUTM2AQ8IVF1 878 aaPredicted RBP17.34■□□□□ 0.37
LIN54-210ENST00000510877 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.37
LIN54-210ENST00000510877 SLC52A1Q9NWF4 448 aa17.32■□□□□ 0.36
LIN54-210ENST00000510877 PLCH2O75038 1416 aa17.32■□□□□ 0.36
LIN54-210ENST00000510877 NGDNQ8NEJ9 315 aaKnown RBP17.31■□□□□ 0.36
LIN54-210ENST00000510877 SRPK2P78362 688 aaKnown RBP17.3■□□□□ 0.36
LIN54-210ENST00000510877 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
LIN54-210ENST00000510877 FYCO1Q9BQS8 1478 aa17.3■□□□□ 0.36
LIN54-210ENST00000510877 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
LIN54-210ENST00000510877 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
LIN54-210ENST00000510877 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
LIN54-210ENST00000510877 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
LIN54-210ENST00000510877 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
LIN54-210ENST00000510877 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
LIN54-210ENST00000510877 ZNF518AQ6AHZ1 1483 aa17.27■□□□□ 0.35
LIN54-210ENST00000510877 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
LIN54-210ENST00000510877 DISP1Q96F81 1524 aa17.26■□□□□ 0.35
LIN54-210ENST00000510877 CSB-PGBD3P0DP91 1061 aa17.26■□□□□ 0.35
LIN54-210ENST00000510877 KIF21BO75037 1637 aa17.26■□□□□ 0.35
LIN54-210ENST00000510877 KIF14Q15058 1648 aa17.25■□□□□ 0.35
LIN54-210ENST00000510877 UHRF1BP1LA0JNW5 1464 aa17.25■□□□□ 0.35
LIN54-210ENST00000510877 SOX12O15370 315 aa17.25■□□□□ 0.35
LIN54-210ENST00000510877 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
LIN54-210ENST00000510877 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
LIN54-210ENST00000510877 NEO1Q92859 1461 aa17.24■□□□□ 0.35
LIN54-210ENST00000510877 TNRQ92752 1358 aa17.24■□□□□ 0.35
LIN54-210ENST00000510877 NCOA2Q15596 1464 aa17.23■□□□□ 0.35
LIN54-210ENST00000510877 DCAF8L1A6NGE4 600 aa17.22■□□□□ 0.35
LIN54-210ENST00000510877 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
LIN54-210ENST00000510877 PSME1Q06323 249 aa17.2■□□□□ 0.34
LIN54-210ENST00000510877 ATP10AO60312 1499 aa17.2■□□□□ 0.34
LIN54-210ENST00000510877 CNTLNQ9NXG0 1405 aa17.2■□□□□ 0.34
LIN54-210ENST00000510877 EVA1CP58658 441 aa17.19■□□□□ 0.34
LIN54-210ENST00000510877 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
LIN54-210ENST00000510877 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
LIN54-210ENST00000510877 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
LIN54-210ENST00000510877 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
LIN54-210ENST00000510877 ANKRD50Q9ULJ7 1429 aa17.16■□□□□ 0.34
LIN54-210ENST00000510877 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
LIN54-210ENST00000510877 MPHOSPH9Q99550 1183 aa17.15■□□□□ 0.34
LIN54-210ENST00000510877 DHX29Q7Z478 1369 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms